RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-223	ENST00000618944	KIF6	Q6ZMV9	814 aa		13.21	□□□□□ -0.29
TP53-223	ENST00000618944	SPC24	Q8NBT2	197 aa		13.21	□□□□□ -0.29
TP53-223	ENST00000618944	ATG3	Q9NT62	314 aa		13.21	□□□□□ -0.29
TP53-223	ENST00000618944	ABCC6	O95255	1503 aa		13.21	□□□□□ -0.29
TP53-223	ENST00000618944	PTPDC1	A2A3K4	754 aa		13.21	□□□□□ -0.3
TP53-223	ENST00000618944	ZAP70	P43403	619 aa		13.21	□□□□□ -0.3
TP53-223	ENST00000618944	KIAA2012	Q0VF49	1180 aa		13.21	□□□□□ -0.3
TP53-223	ENST00000618944	IFIT5	Q13325	482 aa	Known RBP	13.21	□□□□□ -0.3
TP53-223	ENST00000618944	LUZP1	Q86V48	1076 aa		13.21	□□□□□ -0.3
TP53-223	ENST00000618944	MRVI1	Q9Y6F6	885 aa		13.21	□□□□□ -0.3
TP53-223	ENST00000618944	PLEKHG2	Q9H7P9	1386 aa		13.21	□□□□□ -0.3
TP53-223	ENST00000618944	GLI3	P10071	1580 aa		13.21	□□□□□ -0.3
TP53-223	ENST00000618944	KCP	Q6ZWJ8	1503 aa		13.21	□□□□□ -0.3
TP53-223	ENST00000618944	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.2	□□□□□ -0.3
TP53-223	ENST00000618944	SMARCC2	Q8TAQ2	1214 aa		13.2	□□□□□ -0.3
TP53-223	ENST00000618944	PDIA3	P30101	505 aa	Known RBP	13.2	□□□□□ -0.3
TP53-223	ENST00000618944	ANO6	Q4KMQ2	910 aa		13.19	□□□□□ -0.3
TP53-223	ENST00000618944	DNTTIP2	Q5QJE6	756 aa	Known RBP	13.19	□□□□□ -0.3
TP53-223	ENST00000618944	RAB11FIP4	Q86YS3	637 aa		13.19	□□□□□ -0.3
TP53-223	ENST00000618944	LLPH	Q9BRT6	129 aa	Known RBP	13.19	□□□□□ -0.3
TP53-223	ENST00000618944	PUS7L	Q9H0K6	701 aa	Known RBP	13.19	□□□□□ -0.3
TP53-223	ENST00000618944	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.19	□□□□□ -0.3
TP53-223	ENST00000618944	AKAP2	Q9Y2D5	859 aa		13.19	□□□□□ -0.3
TP53-223	ENST00000618944	STARD3NL	O95772	234 aa		13.19	□□□□□ -0.3
TP53-223	ENST00000618944	RBM10	P98175	930 aa	Known RBP	13.19	□□□□□ -0.3
TP53-223	ENST00000618944	METTL24	Q5JXM2	366 aa		13.19	□□□□□ -0.3
TP53-223	ENST00000618944	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.19	□□□□□ -0.3
TP53-223	ENST00000618944	SYTL4	Q96C24	671 aa	Predicted RBP	13.19	□□□□□ -0.3
TP53-223	ENST00000618944	BTG4	Q9NY30	223 aa		13.19	□□□□□ -0.3
TP53-223	ENST00000618944	CFAP45	Q9UL16	551 aa		13.19	□□□□□ -0.3
TP53-223	ENST00000618944	FGA	P02671	866 aa		13.18	□□□□□ -0.3
TP53-223	ENST00000618944	PCCA	P05165	728 aa	Predicted RBP	13.18	□□□□□ -0.3
TP53-223	ENST00000618944	ADD1	P35611	737 aa	Known RBP	13.18	□□□□□ -0.3
TP53-223	ENST00000618944	LDHAL6A	Q6ZMR3	332 aa		13.18	□□□□□ -0.3
TP53-223	ENST00000618944	GREM2	Q9H772	168 aa		13.18	□□□□□ -0.3
TP53-223	ENST00000618944	FOXP2	O15409	715 aa		13.18	□□□□□ -0.3
TP53-223	ENST00000618944	CSF1R	P07333	972 aa		13.18	□□□□□ -0.3
TP53-223	ENST00000618944	ITGA6	P23229	1130 aa		13.18	□□□□□ -0.3
TP53-223	ENST00000618944	OTUD7B	Q6GQQ9	843 aa		13.18	□□□□□ -0.3
TP53-223	ENST00000618944	FAM200A	Q8TCP9	573 aa		13.18	□□□□□ -0.3
TP53-223	ENST00000618944	ZMYND15	Q9H091	742 aa		13.18	□□□□□ -0.3
TP53-223	ENST00000618944	CLSTN2	Q9H4D0	955 aa		13.18	□□□□□ -0.3
TP53-223	ENST00000618944	TRIM28	Q13263	835 aa	Known RBP	13.17	□□□□□ -0.3
TP53-223	ENST00000618944	PKNOX2	Q96KN3	472 aa		13.17	□□□□□ -0.3
TP53-223	ENST00000618944	CBX8	Q9HC52	389 aa		13.17	□□□□□ -0.3
TP53-223	ENST00000618944	DDX19A	Q9NUU7	478 aa	Known RBP	13.17	□□□□□ -0.3
TP53-223	ENST00000618944	TAOK2	Q9UL54	1235 aa		13.17	□□□□□ -0.3
TP53-223	ENST00000618944	NOLC1	Q14978	699 aa	Known RBP eCLIP	13.17	□□□□□ -0.3
TP53-223	ENST00000618944	ATP2B3	Q16720	1220 aa		13.17	□□□□□ -0.3
TP53-223	ENST00000618944	SASS6	Q6UVJ0	657 aa		13.17	□□□□□ -0.3
TP53-223	ENST00000618944	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.17	□□□□□ -0.3
TP53-223	ENST00000618944	AGXT2	Q9BYV1	514 aa		13.17	□□□□□ -0.3
TP53-223	ENST00000618944	CNNM1	Q9NRU3	951 aa		13.17	□□□□□ -0.3
TP53-223	ENST00000618944	UQCRHL	A0A096LP55	91 aa		13.16	□□□□□ -0.3
TP53-223	ENST00000618944	UQCRH	P07919	91 aa		13.16	□□□□□ -0.3
TP53-223	ENST00000618944	HMGN5	P82970	282 aa	Known RBP	13.16	□□□□□ -0.3
TP53-223	ENST00000618944	IMMT	Q16891	758 aa	Known RBP	13.16	□□□□□ -0.3
TP53-223	ENST00000618944	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.16	□□□□□ -0.3
TP53-223	ENST00000618944	NLRP10	Q86W26	655 aa		13.16	□□□□□ -0.3
TP53-223	ENST00000618944	CCAR1	Q8IX12	1150 aa	Known RBP	13.16	□□□□□ -0.3
TP53-223	ENST00000618944	TTLL11	Q8NHH1	800 aa		13.16	□□□□□ -0.3
TP53-223	ENST00000618944	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.16	□□□□□ -0.3
TP53-223	ENST00000618944	ZNF274	Q96GC6	653 aa	Predicted RBP	13.16	□□□□□ -0.3
TP53-223	ENST00000618944	USP28	Q96RU2	1077 aa		13.16	□□□□□ -0.3
TP53-223	ENST00000618944	DNAJC25	Q9H1X3	360 aa		13.16	□□□□□ -0.3
TP53-223	ENST00000618944	TBC1D2B	Q9UPU7	963 aa		13.16	□□□□□ -0.3
TP53-223	ENST00000618944	MAP3K15	Q6ZN16	1313 aa		13.16	□□□□□ -0.3
TP53-223	ENST00000618944	TNS2	Q63HR2	1409 aa		13.16	□□□□□ -0.3
TP53-223	ENST00000618944	NAA16	Q6N069	864 aa	Predicted RBP	13.15	□□□□□ -0.3
TP53-223	ENST00000618944	SLC4A9	Q96Q91	983 aa		13.15	□□□□□ -0.3
TP53-223	ENST00000618944	TRMT112	Q9UI30	125 aa	Known RBP	13.15	□□□□□ -0.3
TP53-223	ENST00000618944	CTNNA3	Q9UI47	895 aa		13.15	□□□□□ -0.3
TP53-223	ENST00000618944	RIPOR2	Q9Y4F9	1068 aa		13.15	□□□□□ -0.3
TP53-223	ENST00000618944		A0A087WWV3	80 aa		13.15	□□□□□ -0.3
TP53-223	ENST00000618944		A0A0G2JS52	829 aa		13.15	□□□□□ -0.3
TP53-223	ENST00000618944	PRC1	O43663	620 aa		13.15	□□□□□ -0.3
TP53-223	ENST00000618944	FDPS	P14324	419 aa	Known RBP	13.15	□□□□□ -0.3
TP53-223	ENST00000618944	MCAM	P43121	646 aa		13.15	□□□□□ -0.3
TP53-223	ENST00000618944	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.15	□□□□□ -0.3
TP53-223	ENST00000618944	HELB	Q8NG08	1087 aa	Predicted RBP	13.15	□□□□□ -0.3
TP53-223	ENST00000618944	PIBF1	Q8WXW3	757 aa		13.15	□□□□□ -0.3
TP53-223	ENST00000618944	LAMB4	A4D0S4	1761 aa		13.15	□□□□□ -0.3
TP53-223	ENST00000618944	IRS4	O14654	1257 aa	Predicted RBP	13.14	□□□□□ -0.31
TP53-223	ENST00000618944	ZNF213	O14771	459 aa		13.14	□□□□□ -0.31
TP53-223	ENST00000618944	GPAA1	O43292	621 aa		13.14	□□□□□ -0.31
TP53-223	ENST00000618944	ZFY	P08048	801 aa	Predicted RBP	13.14	□□□□□ -0.31
TP53-223	ENST00000618944	APPBP2	Q92624	585 aa		13.14	□□□□□ -0.31
TP53-223	ENST00000618944	GOLPH3L	Q9H4A5	285 aa		13.14	□□□□□ -0.31
TP53-223	ENST00000618944	GJB4	Q9NTQ9	266 aa		13.14	□□□□□ -0.31
TP53-223	ENST00000618944	RCOR1	Q9UKL0	485 aa		13.14	□□□□□ -0.31
TP53-223	ENST00000618944	DENND2A	Q9ULE3	1009 aa		13.14	□□□□□ -0.31
TP53-223	ENST00000618944	KLF18	A0A0U1RQI7	1052 aa		13.14	□□□□□ -0.31
TP53-223	ENST00000618944	ANKRD18B	A2A2Z9	1011 aa		13.14	□□□□□ -0.31
TP53-223	ENST00000618944	FAM177B	A6PVY3	158 aa		13.14	□□□□□ -0.31
TP53-223	ENST00000618944	APP	P05067	770 aa		13.14	□□□□□ -0.31
TP53-223	ENST00000618944	ZNF165	P49910	485 aa		13.14	□□□□□ -0.31
TP53-223	ENST00000618944	SLC9C2	Q5TAH2	1124 aa		13.14	□□□□□ -0.31
TP53-223	ENST00000618944	ILDR1	Q86SU0	546 aa	Predicted RBP	13.14	□□□□□ -0.31
TP53-223	ENST00000618944	DRC7	Q8IY82	874 aa		13.14	□□□□□ -0.31
TP53-223	ENST00000618944	PLA2G12B	Q9BX93	195 aa		13.14	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms