RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 KLF18A0A0U1RQI7 1052 aa12.65□□□□□ -0.39
CCDC144B-208ENST00000618081 GNA11P29992 359 aa12.65□□□□□ -0.39
CCDC144B-208ENST00000618081 SLC8A3P57103 927 aa12.64□□□□□ -0.39
CCDC144B-208ENST00000618081 ATP2B3Q16720 1220 aa12.64□□□□□ -0.39
CCDC144B-208ENST00000618081 UVSSAQ2YD98 709 aa12.64□□□□□ -0.39
CCDC144B-208ENST00000618081 ZCRB1Q8TBF4 217 aaKnown RBP12.64□□□□□ -0.39
CCDC144B-208ENST00000618081 HAUS2Q9NVX0 235 aa12.64□□□□□ -0.39
CCDC144B-208ENST00000618081 MKRN1Q9UHC7 482 aaKnown RBP12.64□□□□□ -0.39
CCDC144B-208ENST00000618081 F8W031 263 aaPredicted RBP12.64□□□□□ -0.39
CCDC144B-208ENST00000618081 KRT2P35908 639 aa12.64□□□□□ -0.39
CCDC144B-208ENST00000618081 VEZTQ9HBM0 779 aa12.64□□□□□ -0.39
CCDC144B-208ENST00000618081 TACC1O75410 805 aa12.64□□□□□ -0.39
CCDC144B-208ENST00000618081 FRMD4BQ9Y2L6 1034 aa12.64□□□□□ -0.39
CCDC144B-208ENST00000618081 ZMYND15Q9H091 742 aa12.64□□□□□ -0.39
CCDC144B-208ENST00000618081 IL16Q14005 1332 aa12.64□□□□□ -0.39
CCDC144B-208ENST00000618081 TOM1O60784 492 aa12.64□□□□□ -0.39
CCDC144B-208ENST00000618081 KRT83P78385 493 aa12.64□□□□□ -0.39
CCDC144B-208ENST00000618081 CEP128Q6ZU80 1094 aa12.64□□□□□ -0.39
CCDC144B-208ENST00000618081 ARFGAP3Q9NP61 516 aa12.64□□□□□ -0.39
CCDC144B-208ENST00000618081 ANKRD36BQ8N2N9 1353 aa12.64□□□□□ -0.39
CCDC144B-208ENST00000618081 DENND4BO75064 1496 aaPredicted RBP12.64□□□□□ -0.39
CCDC144B-208ENST00000618081 PARP3Q9Y6F1 533 aa12.64□□□□□ -0.39
CCDC144B-208ENST00000618081 TNPO1Q92973 898 aaKnown RBP12.63□□□□□ -0.39
CCDC144B-208ENST00000618081 ZC3H12CQ9C0D7 883 aaKnown RBP12.63□□□□□ -0.39
CCDC144B-208ENST00000618081 OPA1O60313 960 aa12.63□□□□□ -0.39
CCDC144B-208ENST00000618081 CBX1P83916 185 aa12.63□□□□□ -0.39
CCDC144B-208ENST00000618081 TTC22Q5TAA0 569 aa12.63□□□□□ -0.39
CCDC144B-208ENST00000618081 NEK11Q8NG66 645 aa12.63□□□□□ -0.39
CCDC144B-208ENST00000618081 KRT86O43790 486 aa12.63□□□□□ -0.39
CCDC144B-208ENST00000618081 ALDH3A1P30838 453 aa12.63□□□□□ -0.39
CCDC144B-208ENST00000618081 KIF5AQ12840 1032 aa12.63□□□□□ -0.39
CCDC144B-208ENST00000618081 GRM8O00222 908 aa12.63□□□□□ -0.39
CCDC144B-208ENST00000618081 EMILIN1Q9Y6C2 1016 aa12.63□□□□□ -0.39
CCDC144B-208ENST00000618081 KIF21AQ7Z4S6 1674 aa12.63□□□□□ -0.39
CCDC144B-208ENST00000618081 PLCB3Q01970 1234 aa12.63□□□□□ -0.39
CCDC144B-208ENST00000618081 SH2D4AQ9H788 454 aa12.63□□□□□ -0.39
CCDC144B-208ENST00000618081 TMEM110-MUSTN1A8MSY1 372 aa12.62□□□□□ -0.39
CCDC144B-208ENST00000618081 GABPB2Q8TAK5 448 aaPredicted RBP12.62□□□□□ -0.39
CCDC144B-208ENST00000618081 TEX14Q8IWB6 1497 aa12.62□□□□□ -0.39
CCDC144B-208ENST00000618081 NPHP3Q7Z494 1330 aa12.62□□□□□ -0.39
CCDC144B-208ENST00000618081 CFAP157Q5JU67 520 aa12.62□□□□□ -0.39
CCDC144B-208ENST00000618081 KIFAP3Q92845 792 aa12.62□□□□□ -0.39
CCDC144B-208ENST00000618081 RTCBQ9Y3I0 505 aaKnown RBP12.62□□□□□ -0.39
CCDC144B-208ENST00000618081 KIF1BO60333 1816 aa12.62□□□□□ -0.39
CCDC144B-208ENST00000618081 LARP6Q9BRS8 491 aaKnown RBP12.62□□□□□ -0.39
CCDC144B-208ENST00000618081 NIP7Q9Y221 180 aaKnown RBP eCLIP12.62□□□□□ -0.39
CCDC144B-208ENST00000618081 ZSCAN22P10073 491 aaPredicted RBP12.62□□□□□ -0.39
CCDC144B-208ENST00000618081 ATP6V0A2Q9Y487 856 aa12.62□□□□□ -0.39
CCDC144B-208ENST00000618081 NOL3O60936 208 aaKnown RBP12.61□□□□□ -0.39
CCDC144B-208ENST00000618081 MSL1Q68DK7 614 aa12.61□□□□□ -0.39
CCDC144B-208ENST00000618081 CCDC129Q6ZRS4 1044 aa12.61□□□□□ -0.39
CCDC144B-208ENST00000618081 RBM28Q9NW13 759 aaKnown RBP12.61□□□□□ -0.39
CCDC144B-208ENST00000618081 SSFA2P28290 1259 aa12.61□□□□□ -0.39
CCDC144B-208ENST00000618081 BRDTQ58F21 947 aaPredicted RBP12.61□□□□□ -0.39
CCDC144B-208ENST00000618081 KRT79Q5XKE5 535 aa12.61□□□□□ -0.39
CCDC144B-208ENST00000618081 EYA3Q99504 573 aa12.61□□□□□ -0.39
CCDC144B-208ENST00000618081 TRIM7Q9C029 511 aa12.61□□□□□ -0.39
CCDC144B-208ENST00000618081 CHPF2Q9P2E5 772 aa12.61□□□□□ -0.39
CCDC144B-208ENST00000618081 FAM169AQ9Y6X4 670 aa12.61□□□□□ -0.39
CCDC144B-208ENST00000618081 NOS1P29475 1434 aa12.61□□□□□ -0.39
CCDC144B-208ENST00000618081 TPTE2Q6XPS3 522 aa12.61□□□□□ -0.39
CCDC144B-208ENST00000618081 PICK1Q9NRD5 415 aa12.61□□□□□ -0.39
CCDC144B-208ENST00000618081 BIN2Q9UBW5 565 aaPredicted RBP12.61□□□□□ -0.39
CCDC144B-208ENST00000618081 IL15P40933 162 aaPredicted RBP12.61□□□□□ -0.39
CCDC144B-208ENST00000618081 NBPF14Q5TI25 921 aa12.61□□□□□ -0.39
CCDC144B-208ENST00000618081 IVLP07476 585 aa12.61□□□□□ -0.39
CCDC144B-208ENST00000618081 TBC1D31Q96DN5 1066 aa12.61□□□□□ -0.39
CCDC144B-208ENST00000618081 ANKRD2Q9GZV1 360 aa12.61□□□□□ -0.39
CCDC144B-208ENST00000618081 TPD52P55327 224 aaPredicted RBP12.61□□□□□ -0.39
CCDC144B-208ENST00000618081 ARID5AQ03989 594 aa12.61□□□□□ -0.39
CCDC144B-208ENST00000618081 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.61□□□□□ -0.39
CCDC144B-208ENST00000618081 CCT6BQ92526 530 aa12.61□□□□□ -0.39
CCDC144B-208ENST00000618081 NAP1L3Q99457 506 aaPredicted RBP12.61□□□□□ -0.39
CCDC144B-208ENST00000618081 KDM5BQ9UGL1 1544 aa12.61□□□□□ -0.39
CCDC144B-208ENST00000618081 CTAGE15A4D2H0 777 aa12.6□□□□□ -0.39
CCDC144B-208ENST00000618081 CTAGE8P0CG41 777 aa12.6□□□□□ -0.39
CCDC144B-208ENST00000618081 CTAGE6Q86UF2 777 aa12.6□□□□□ -0.39
CCDC144B-208ENST00000618081 CTAGE4Q8IX94 777 aa12.6□□□□□ -0.39
CCDC144B-208ENST00000618081 TRIM75PA6NK02 468 aa12.6□□□□□ -0.39
CCDC144B-208ENST00000618081 RPL13P26373 211 aaKnown RBP12.6□□□□□ -0.39
CCDC144B-208ENST00000618081 GJC1P36383 396 aa12.6□□□□□ -0.39
CCDC144B-208ENST00000618081 DTHD1Q6ZMT9 781 aa12.6□□□□□ -0.39
CCDC144B-208ENST00000618081 GOLGA1Q92805 767 aa12.6□□□□□ -0.39
CCDC144B-208ENST00000618081 PAG1Q9NWQ8 432 aa12.6□□□□□ -0.39
CCDC144B-208ENST00000618081 DUOX2Q9NRD8 1548 aa12.6□□□□□ -0.39
CCDC144B-208ENST00000618081 HAUS7Q99871 368 aa12.6□□□□□ -0.39
CCDC144B-208ENST00000618081 CSRNP2Q9H175 543 aa12.6□□□□□ -0.39
CCDC144B-208ENST00000618081 CRCPO75575 148 aa12.6□□□□□ -0.39
CCDC144B-208ENST00000618081 SMTNP53814 917 aa12.6□□□□□ -0.39
CCDC144B-208ENST00000618081 PPP1R7Q15435 360 aa12.6□□□□□ -0.39
CCDC144B-208ENST00000618081 CDAN1Q8IWY9 1227 aa12.6□□□□□ -0.39
CCDC144B-208ENST00000618081 NAP1L4Q99733 375 aaKnown RBP12.6□□□□□ -0.39
CCDC144B-208ENST00000618081 RTL1A6NKG5 1358 aa12.6□□□□□ -0.39
CCDC144B-208ENST00000618081 C8orf37Q96NL8 207 aa12.6□□□□□ -0.39
CCDC144B-208ENST00000618081 BACH1O14867 736 aa12.59□□□□□ -0.39
CCDC144B-208ENST00000618081 LDHBP07195 334 aaKnown RBP12.59□□□□□ -0.39
CCDC144B-208ENST00000618081 PTGS1P23219 599 aa12.59□□□□□ -0.39
CCDC144B-208ENST00000618081 ANO6Q4KMQ2 910 aa12.59□□□□□ -0.39
CCDC144B-208ENST00000618081 RAB11FIP4Q86YS3 637 aa12.59□□□□□ -0.39
CCDC144B-208ENST00000618081 MTRF1LQ9UGC7 380 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms