RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 PPIP5K2O43314 1243 aa19.24■□□□□ 0.67
PCDHGC3-204ENST00000617222 IARSP41252 1262 aaKnown RBP19.24■□□□□ 0.67
PCDHGC3-204ENST00000617222 PRELPP51888 382 aa19.24■□□□□ 0.67
PCDHGC3-204ENST00000617222 AOC3Q16853 763 aa19.24■□□□□ 0.67
PCDHGC3-204ENST00000617222 TNNI3KQ59H18 835 aa19.24■□□□□ 0.67
PCDHGC3-204ENST00000617222 FPGT-TNNI3KV9GXZ4 949 aa19.24■□□□□ 0.67
PCDHGC3-204ENST00000617222 ARFGEF1Q9Y6D6 1849 aa19.23■□□□□ 0.67
PCDHGC3-204ENST00000617222 KIAA2012Q0VF49 1180 aa19.23■□□□□ 0.67
PCDHGC3-204ENST00000617222 C15orf52Q6ZUT6 534 aaKnown RBP19.23■□□□□ 0.67
PCDHGC3-204ENST00000617222 AACSQ86V21 672 aa19.23■□□□□ 0.67
PCDHGC3-204ENST00000617222 CLASRPQ8N2M8 674 aaKnown RBP19.23■□□□□ 0.67
PCDHGC3-204ENST00000617222 LARGE2Q8N3Y3 721 aa19.23■□□□□ 0.67
PCDHGC3-204ENST00000617222 EAF2Q96CJ1 260 aaPredicted RBP19.23■□□□□ 0.67
PCDHGC3-204ENST00000617222 CCDC8Q9H0W5 538 aaPredicted RBP19.23■□□□□ 0.67
PCDHGC3-204ENST00000617222 ZBTB47Q9UFB7 747 aaPredicted RBP19.23■□□□□ 0.67
PCDHGC3-204ENST00000617222 ADORA1P30542 326 aa19.22■□□□□ 0.67
PCDHGC3-204ENST00000617222 GYG1P46976 350 aa19.22■□□□□ 0.67
PCDHGC3-204ENST00000617222 DOK7Q18PE1 504 aa19.22■□□□□ 0.67
PCDHGC3-204ENST00000617222 XAGE2Q96GT9 111 aa19.22■□□□□ 0.67
PCDHGC3-204ENST00000617222 FAM84BQ96KN1 310 aaPredicted RBP19.22■□□□□ 0.67
PCDHGC3-204ENST00000617222 VPS33BQ9H267 617 aa19.22■□□□□ 0.67
PCDHGC3-204ENST00000617222 DUOX1Q9NRD9 1551 aa19.22■□□□□ 0.67
PCDHGC3-204ENST00000617222 IRS2Q9Y4H2 1338 aa19.22■□□□□ 0.67
PCDHGC3-204ENST00000617222 MED23Q9ULK4 1368 aa19.21■□□□□ 0.67
PCDHGC3-204ENST00000617222 G3V3G9 751 aa19.21■□□□□ 0.67
PCDHGC3-204ENST00000617222 LMNB1P20700 586 aa19.21■□□□□ 0.67
PCDHGC3-204ENST00000617222 DCAF8Q5TAQ9 597 aa19.21■□□□□ 0.67
PCDHGC3-204ENST00000617222 HIBADHP31937 336 aaKnown RBP19.2■□□□□ 0.66
PCDHGC3-204ENST00000617222 BCAMP50895 628 aa19.2■□□□□ 0.66
PCDHGC3-204ENST00000617222 CAVIN4Q5BKX8 364 aa19.2■□□□□ 0.66
PCDHGC3-204ENST00000617222 GORABQ5T7V8 394 aa19.2■□□□□ 0.66
PCDHGC3-204ENST00000617222 FBXO33Q7Z6M2 555 aa19.2■□□□□ 0.66
PCDHGC3-204ENST00000617222 VPS37DQ86XT2 251 aa19.2■□□□□ 0.66
PCDHGC3-204ENST00000617222 DBNDD2Q9BQY9 259 aa19.2■□□□□ 0.66
PCDHGC3-204ENST00000617222 ZNF609O15014 1411 aa19.19■□□□□ 0.66
PCDHGC3-204ENST00000617222 IFIT2P09913 472 aaKnown RBP19.19■□□□□ 0.66
PCDHGC3-204ENST00000617222 C9orf131Q5VYM1 1079 aa19.19■□□□□ 0.66
PCDHGC3-204ENST00000617222 CENPQQ7L2Z9 268 aaPredicted RBP19.19■□□□□ 0.66
PCDHGC3-204ENST00000617222 ZNF804AQ7Z570 1209 aa19.19■□□□□ 0.66
PCDHGC3-204ENST00000617222 C16orf71Q8IYS4 520 aaPredicted RBP19.19■□□□□ 0.66
PCDHGC3-204ENST00000617222 JDP2Q8WYK2 163 aa19.19■□□□□ 0.66
PCDHGC3-204ENST00000617222 DBNDD1Q9H9R9 158 aa19.19■□□□□ 0.66
PCDHGC3-204ENST00000617222 TLR7Q9NYK1 1049 aaKnown RBP19.19■□□□□ 0.66
PCDHGC3-204ENST00000617222 RNF181Q9P0P0 153 aa19.19■□□□□ 0.66
PCDHGC3-204ENST00000617222 FER1L6Q2WGJ9 1857 aa19.19■□□□□ 0.66
PCDHGC3-204ENST00000617222 LTBP1Q14766 1721 aa19.19■□□□□ 0.66
PCDHGC3-204ENST00000617222 KDM2BQ8NHM5 1336 aa19.19■□□□□ 0.66
PCDHGC3-204ENST00000617222 NUCB1Q02818 461 aa19.18■□□□□ 0.66
PCDHGC3-204ENST00000617222 CHD1LQ86WJ1 897 aa19.18■□□□□ 0.66
PCDHGC3-204ENST00000617222 NIM1KQ8IY84 436 aa19.18■□□□□ 0.66
PCDHGC3-204ENST00000617222 LNPKQ9C0E8 428 aa19.18■□□□□ 0.66
PCDHGC3-204ENST00000617222 COA1Q9GZY4 146 aa19.18■□□□□ 0.66
PCDHGC3-204ENST00000617222 CD209Q9NNX6 404 aa19.18■□□□□ 0.66
PCDHGC3-204ENST00000617222 DBNLQ9UJU6 430 aaKnown RBP19.18■□□□□ 0.66
PCDHGC3-204ENST00000617222 PHKA1P46020 1223 aa19.17■□□□□ 0.66
PCDHGC3-204ENST00000617222 CCDC102BQ68D86 513 aa19.17■□□□□ 0.66
PCDHGC3-204ENST00000617222 ECE2O60344 883 aa19.16■□□□□ 0.66
PCDHGC3-204ENST00000617222 GNL3LQ9NVN8 582 aaKnown RBP19.16■□□□□ 0.66
PCDHGC3-204ENST00000617222 GTF3C3Q9Y5Q9 886 aa19.16■□□□□ 0.66
PCDHGC3-204ENST00000617222 CCDC158Q5M9N0 1113 aa19.15■□□□□ 0.66
PCDHGC3-204ENST00000617222 PODNQ7Z5L7 613 aa19.15■□□□□ 0.66
PCDHGC3-204ENST00000617222 OTUD7AQ8TE49 926 aaPredicted RBP19.15■□□□□ 0.66
PCDHGC3-204ENST00000617222 ZNRF3Q9ULT6 936 aa19.15■□□□□ 0.66
PCDHGC3-204ENST00000617222 IQSEC3Q9UPP2 1182 aaPredicted RBP19.15■□□□□ 0.66
PCDHGC3-204ENST00000617222 A0A1B0GUL6 1792 aa19.14■□□□□ 0.66
PCDHGC3-204ENST00000617222 YDJCA8MPS7 323 aa19.14■□□□□ 0.65
PCDHGC3-204ENST00000617222 FRAT2O75474 233 aaPredicted RBP19.14■□□□□ 0.65
PCDHGC3-204ENST00000617222 IL1R1P14778 569 aa19.14■□□□□ 0.65
PCDHGC3-204ENST00000617222 TTC39AQ5SRH9 613 aa19.14■□□□□ 0.65
PCDHGC3-204ENST00000617222 TDRD7Q8NHU6 1098 aaKnown RBP19.14■□□□□ 0.65
PCDHGC3-204ENST00000617222 KCNQ5Q9NR82 932 aa19.14■□□□□ 0.65
PCDHGC3-204ENST00000617222 COL4A5P29400 1685 aa19.13■□□□□ 0.65
PCDHGC3-204ENST00000617222 FZD9O00144 591 aa19.12■□□□□ 0.65
PCDHGC3-204ENST00000617222 RAD17O75943 681 aa19.12■□□□□ 0.65
PCDHGC3-204ENST00000617222 UQCRFS1P1P0C7P4 283 aa19.12■□□□□ 0.65
PCDHGC3-204ENST00000617222 GOLGB1Q14789 3259 aaKnown RBP19.12■□□□□ 0.65
PCDHGC3-204ENST00000617222 EIF6P56537 245 aaKnown RBP19.11■□□□□ 0.65
PCDHGC3-204ENST00000617222 GTF2IP78347 998 aa19.11■□□□□ 0.65
PCDHGC3-204ENST00000617222 CXCL9Q07325 125 aa19.11■□□□□ 0.65
PCDHGC3-204ENST00000617222 CHAF1AQ13111 956 aaPredicted RBP19.11■□□□□ 0.65
PCDHGC3-204ENST00000617222 FBXW7Q969H0 707 aa19.11■□□□□ 0.65
PCDHGC3-204ENST00000617222 JAG2Q9Y219 1238 aa19.11■□□□□ 0.65
PCDHGC3-204ENST00000617222 PDE4AP27815 886 aa19.1■□□□□ 0.65
PCDHGC3-204ENST00000617222 ARID4AP29374 1257 aaPredicted RBP19.1■□□□□ 0.65
PCDHGC3-204ENST00000617222 TTLL5Q6EMB2 1281 aa19.1■□□□□ 0.65
PCDHGC3-204ENST00000617222 GPATCH3Q96I76 525 aa19.1■□□□□ 0.65
PCDHGC3-204ENST00000617222 ZNF512BQ96KM6 892 aaPredicted RBP19.1■□□□□ 0.65
PCDHGC3-204ENST00000617222 ECHDC1Q9NTX5 307 aa19.1■□□□□ 0.65
PCDHGC3-204ENST00000617222 DENND2AQ9ULE3 1009 aa19.1■□□□□ 0.65
PCDHGC3-204ENST00000617222 USP17L3A6NCW0 530 aa19.09■□□□□ 0.65
PCDHGC3-204ENST00000617222 USP17L4A6NCW7 530 aa19.09■□□□□ 0.65
PCDHGC3-204ENST00000617222 SEMA3EO15041 775 aa19.09■□□□□ 0.65
PCDHGC3-204ENST00000617222 MX1P20591 662 aa19.09■□□□□ 0.65
PCDHGC3-204ENST00000617222 RASGRF1Q13972 1273 aa19.09■□□□□ 0.65
PCDHGC3-204ENST00000617222 SCARF1Q14162 830 aa19.09■□□□□ 0.65
PCDHGC3-204ENST00000617222 TSHZ3Q63HK5 1081 aa19.09■□□□□ 0.65
PCDHGC3-204ENST00000617222 CIAPIN1Q6FI81 312 aa19.09■□□□□ 0.65
PCDHGC3-204ENST00000617222 USP17L1Q7RTZ2 530 aa19.09■□□□□ 0.65
PCDHGC3-204ENST00000617222 SNRKQ9NRH2 765 aa19.09■□□□□ 0.65
PCDHGC3-204ENST00000617222 SALL3Q9BXA9 1300 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms