RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 TPM1P09493 284 aa18.05■□□□□ 0.48
NOP56-220ENST00000616692 TACO1Q9BSH4 297 aaKnown RBP18.05■□□□□ 0.48
NOP56-220ENST00000616692 MAF1Q9H063 256 aa18.05■□□□□ 0.48
NOP56-220ENST00000616692 CCDC87Q9NVE4 849 aa18.05■□□□□ 0.48
NOP56-220ENST00000616692 ASAP1Q9ULH1 1129 aa18.05■□□□□ 0.48
NOP56-220ENST00000616692 EIF4A2Q14240 407 aaKnown RBP18.04■□□□□ 0.48
NOP56-220ENST00000616692 CCP110O43303 1012 aa18.04■□□□□ 0.48
NOP56-220ENST00000616692 RPS6KA4O75676 772 aa18.04■□□□□ 0.48
NOP56-220ENST00000616692 WWC2Q6AWC2 1192 aa18.04■□□□□ 0.48
NOP56-220ENST00000616692 C21orf2O43822 256 aa18.03■□□□□ 0.48
NOP56-220ENST00000616692 NEBLO76041 1014 aa18.03■□□□□ 0.48
NOP56-220ENST00000616692 ECEL1O95672 775 aa18.03■□□□□ 0.48
NOP56-220ENST00000616692 TRAF1Q13077 416 aa18.03■□□□□ 0.48
NOP56-220ENST00000616692 KMT5BQ4FZB7 885 aa18.03■□□□□ 0.48
NOP56-220ENST00000616692 CAVIN1Q6NZI2 390 aaKnown RBP18.03■□□□□ 0.48
NOP56-220ENST00000616692 MIEF2Q96C03 454 aa18.03■□□□□ 0.48
NOP56-220ENST00000616692 NUB1Q9Y5A7 615 aa18.03■□□□□ 0.48
NOP56-220ENST00000616692 MMP10P09238 476 aa18.02■□□□□ 0.48
NOP56-220ENST00000616692 SMC5Q8IY18 1101 aa18.02■□□□□ 0.48
NOP56-220ENST00000616692 FBXO18Q8NFZ0 1043 aa18.02■□□□□ 0.48
NOP56-220ENST00000616692 SLC24A3Q9HC58 644 aa18.02■□□□□ 0.48
NOP56-220ENST00000616692 PPFIA2O75334 1257 aa18.02■□□□□ 0.47
NOP56-220ENST00000616692 CLEC17AQ6ZS10 378 aa18.02■□□□□ 0.47
NOP56-220ENST00000616692 THOC1Q96FV9 657 aaKnown RBP18.02■□□□□ 0.47
NOP56-220ENST00000616692 CPSF2Q9P2I0 782 aaKnown RBP18.02■□□□□ 0.47
NOP56-220ENST00000616692 APLP1P51693 650 aa18.01■□□□□ 0.47
NOP56-220ENST00000616692 GOLGA5Q8TBA6 731 aa18.01■□□□□ 0.47
NOP56-220ENST00000616692 SMTNL1A8MU46 457 aa18■□□□□ 0.47
NOP56-220ENST00000616692 EIF3JO75822 258 aaKnown RBP18■□□□□ 0.47
NOP56-220ENST00000616692 HDGFL1Q5TGJ6 251 aa18■□□□□ 0.47
NOP56-220ENST00000616692 FMNL3Q8IVF7 1028 aa18■□□□□ 0.47
NOP56-220ENST00000616692 TPD52L2O43399 206 aaKnown RBP18■□□□□ 0.47
NOP56-220ENST00000616692 GPS2Q13227 327 aa18■□□□□ 0.47
NOP56-220ENST00000616692 CCDC26Q8TAB7 109 aa18■□□□□ 0.47
NOP56-220ENST00000616692 ARFGEF1Q9Y6D6 1849 aa17.99■□□□□ 0.47
NOP56-220ENST00000616692 MAGEA8P43361 318 aa17.99■□□□□ 0.47
NOP56-220ENST00000616692 LRSAM1Q6UWE0 723 aa17.99■□□□□ 0.47
NOP56-220ENST00000616692 CPP00450 1065 aa17.99■□□□□ 0.47
NOP56-220ENST00000616692 SETSIPP0DME0 302 aa17.99■□□□□ 0.47
NOP56-220ENST00000616692 PSMD2Q13200 908 aa17.99■□□□□ 0.47
NOP56-220ENST00000616692 NUCB2P80303 420 aa17.98■□□□□ 0.47
NOP56-220ENST00000616692 IQUBQ8NA54 791 aa17.98■□□□□ 0.47
NOP56-220ENST00000616692 PARP3Q9Y6F1 533 aa17.98■□□□□ 0.47
NOP56-220ENST00000616692 BRCA1P38398 1863 aaKnown RBP17.98■□□□□ 0.47
NOP56-220ENST00000616692 RWDD2BP57060 319 aa17.98■□□□□ 0.47
NOP56-220ENST00000616692 RANBP17Q9H2T7 1088 aaKnown RBP17.98■□□□□ 0.47
NOP56-220ENST00000616692 TTC12Q9H892 705 aaPredicted RBP17.98■□□□□ 0.47
NOP56-220ENST00000616692 KDM6AO15550 1401 aaPredicted RBP17.98■□□□□ 0.47
NOP56-220ENST00000616692 TOMM70O94826 608 aa17.97■□□□□ 0.47
NOP56-220ENST00000616692 PAX3P23760 479 aa17.97■□□□□ 0.47
NOP56-220ENST00000616692 SH3GL3Q99963 347 aa17.97■□□□□ 0.47
NOP56-220ENST00000616692 GYS1P13807 737 aa17.97■□□□□ 0.47
NOP56-220ENST00000616692 RFC4P35249 363 aa17.97■□□□□ 0.47
NOP56-220ENST00000616692 SLFNL1Q499Z3 407 aa17.97■□□□□ 0.47
NOP56-220ENST00000616692 CABP4P57796 275 aa17.96■□□□□ 0.47
NOP56-220ENST00000616692 TBC1D8BQ0IIM8 1120 aa17.96■□□□□ 0.47
NOP56-220ENST00000616692 MFSD4BQ5TF39 518 aa17.96■□□□□ 0.47
NOP56-220ENST00000616692 SLC4A9Q96Q91 983 aa17.96■□□□□ 0.47
NOP56-220ENST00000616692 IL16Q14005 1332 aa17.96■□□□□ 0.47
NOP56-220ENST00000616692 U2SURPO15042 1029 aaKnown RBP17.96■□□□□ 0.47
NOP56-220ENST00000616692 MYBL2P10244 700 aa17.96■□□□□ 0.47
NOP56-220ENST00000616692 RBM46Q8TBY0 533 aaKnown RBP17.96■□□□□ 0.47
NOP56-220ENST00000616692 SNX21Q969T3 373 aa17.96■□□□□ 0.47
NOP56-220ENST00000616692 ZNF396Q96N95 335 aaPredicted RBP17.96■□□□□ 0.47
NOP56-220ENST00000616692 ZC3H4Q9UPT8 1303 aaKnown RBP17.96■□□□□ 0.47
NOP56-220ENST00000616692 TPM4P67936 248 aa17.95■□□□□ 0.46
NOP56-220ENST00000616692 NAA30Q147X3 362 aaPredicted RBP17.95■□□□□ 0.46
NOP56-220ENST00000616692 CCDC186Q7Z3E2 898 aa17.95■□□□□ 0.46
NOP56-220ENST00000616692 MICALL1Q8N3F8 863 aa17.95■□□□□ 0.46
NOP56-220ENST00000616692 GOPCQ9HD26 462 aa17.95■□□□□ 0.46
NOP56-220ENST00000616692 ZNF530Q6P9A1 599 aaPredicted RBP17.95■□□□□ 0.46
NOP56-220ENST00000616692 KIAA1524Q8TCG1 905 aa17.95■□□□□ 0.46
NOP56-220ENST00000616692 EIF4G2P78344 907 aaKnown RBP eCLIP17.95■□□□□ 0.46
NOP56-220ENST00000616692 RMI1Q9H9A7 625 aa17.95■□□□□ 0.46
NOP56-220ENST00000616692 C1orf141Q5JVX7 400 aa17.94■□□□□ 0.46
NOP56-220ENST00000616692 STAG1Q8WVM7 1258 aa17.94■□□□□ 0.46
NOP56-220ENST00000616692 PCDHGA4Q9Y5G9 962 aa17.94■□□□□ 0.46
NOP56-220ENST00000616692 PTPRCP08575 1304 aa17.94■□□□□ 0.46
NOP56-220ENST00000616692 N4BP2Q86UW6 1770 aaPredicted RBP17.94■□□□□ 0.46
NOP56-220ENST00000616692 GIMAP7Q8NHV1 300 aa17.94■□□□□ 0.46
NOP56-220ENST00000616692 RBM42Q9BTD8 480 aaKnown RBP17.94■□□□□ 0.46
NOP56-220ENST00000616692 TJP1Q07157 1748 aa17.94■□□□□ 0.46
NOP56-220ENST00000616692 BAG4O95429 457 aaKnown RBP17.93■□□□□ 0.46
NOP56-220ENST00000616692 FSTL1Q12841 308 aa17.93■□□□□ 0.46
NOP56-220ENST00000616692 NFXL1Q6ZNB6 911 aa17.93■□□□□ 0.46
NOP56-220ENST00000616692 DNAAF4Q8WXU2 420 aa17.93■□□□□ 0.46
NOP56-220ENST00000616692 GTF3C6Q969F1 213 aa17.93■□□□□ 0.46
NOP56-220ENST00000616692 MRC1P22897 1456 aa17.93■□□□□ 0.46
NOP56-220ENST00000616692 EIF3CLB5ME19 914 aaKnown RBP17.93■□□□□ 0.46
NOP56-220ENST00000616692 DPEP1P16444 411 aa17.93■□□□□ 0.46
NOP56-220ENST00000616692 FBXO38Q6PIJ6 1188 aa17.93■□□□□ 0.46
NOP56-220ENST00000616692 TEX11Q8IYF3 940 aa17.93■□□□□ 0.46
NOP56-220ENST00000616692 SMARCE1Q969G3 411 aa17.93■□□□□ 0.46
NOP56-220ENST00000616692 EIF3CQ99613 913 aaKnown RBP17.93■□□□□ 0.46
NOP56-220ENST00000616692 VEZTQ9HBM0 779 aa17.93■□□□□ 0.46
NOP56-220ENST00000616692 PIM2Q9P1W9 311 aa17.93■□□□□ 0.46
NOP56-220ENST00000616692 MTHFSP49914 203 aa17.92■□□□□ 0.46
NOP56-220ENST00000616692 NAP1L1P55209 391 aaKnown RBP17.92■□□□□ 0.46
NOP56-220ENST00000616692 TBC1D25Q3MII6 688 aa17.92■□□□□ 0.46
NOP56-220ENST00000616692 SCN11AQ9UI33 1791 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms