RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 RFC4P35249 363 aa15.34■□□□□ 0.05
PPP4R3B-206ENST00000616407 TXLNAP40222 546 aa15.34■□□□□ 0.05
PPP4R3B-206ENST00000616407 EPHA10Q5JZY3 1008 aa15.34■□□□□ 0.05
PPP4R3B-206ENST00000616407 CTCFLQ8NI51 663 aaPredicted RBP15.34■□□□□ 0.05
PPP4R3B-206ENST00000616407 ALG1Q9BT22 464 aa15.34■□□□□ 0.05
PPP4R3B-206ENST00000616407 PUS3Q9BZE2 481 aaKnown RBP15.34■□□□□ 0.05
PPP4R3B-206ENST00000616407 SLC4A8Q2Y0W8 1093 aa15.34■□□□□ 0.05
PPP4R3B-206ENST00000616407 UVSSAQ2YD98 709 aa15.34■□□□□ 0.05
PPP4R3B-206ENST00000616407 APPBP2Q92624 585 aa15.34■□□□□ 0.05
PPP4R3B-206ENST00000616407 ZSWIM6Q9HCJ5 1215 aa15.34■□□□□ 0.05
PPP4R3B-206ENST00000616407 PTPN12Q05209 780 aaKnown RBP15.34■□□□□ 0.05
PPP4R3B-206ENST00000616407 GPAA1O43292 621 aa15.34■□□□□ 0.05
PPP4R3B-206ENST00000616407 TAF5LO75529 589 aa15.34■□□□□ 0.05
PPP4R3B-206ENST00000616407 RXRAP19793 462 aa15.34■□□□□ 0.05
PPP4R3B-206ENST00000616407 MAP4K1Q92918 833 aa15.34■□□□□ 0.05
PPP4R3B-206ENST00000616407 DIP2AQ14689 1571 aa15.33■□□□□ 0.05
PPP4R3B-206ENST00000616407 WTAPQ15007 396 aa15.33■□□□□ 0.04
PPP4R3B-206ENST00000616407 AK7Q96M32 723 aa15.33■□□□□ 0.04
PPP4R3B-206ENST00000616407 HAUS7Q99871 368 aa15.33■□□□□ 0.04
PPP4R3B-206ENST00000616407 TMEM63CQ9P1W3 806 aa15.33■□□□□ 0.04
PPP4R3B-206ENST00000616407 RBM10P98175 930 aaKnown RBP15.33■□□□□ 0.04
PPP4R3B-206ENST00000616407 CLSTN1O94985 981 aa15.33■□□□□ 0.04
PPP4R3B-206ENST00000616407 KIF2CQ99661 725 aa15.33■□□□□ 0.04
PPP4R3B-206ENST00000616407 TPCN1Q9ULQ1 816 aa15.33■□□□□ 0.04
PPP4R3B-206ENST00000616407 MAP2P11137 1827 aaKnown RBP15.33■□□□□ 0.04
PPP4R3B-206ENST00000616407 JAK2O60674 1132 aa15.32■□□□□ 0.04
PPP4R3B-206ENST00000616407 IKQ13123 557 aaPredicted RBP15.32■□□□□ 0.04
PPP4R3B-206ENST00000616407 MTX1Q13505 466 aa15.32■□□□□ 0.04
PPP4R3B-206ENST00000616407 CATIPQ7Z7H3 387 aa15.32■□□□□ 0.04
PPP4R3B-206ENST00000616407 RPGRQ92834 1020 aaKnown RBP15.32■□□□□ 0.04
PPP4R3B-206ENST00000616407 CDCA7Q9BWT1 371 aaPredicted RBP15.32■□□□□ 0.04
PPP4R3B-206ENST00000616407 NRKQ7Z2Y5 1582 aa15.32■□□□□ 0.04
PPP4R3B-206ENST00000616407 KRT23Q9C075 422 aa15.32■□□□□ 0.04
PPP4R3B-206ENST00000616407 CCDC87Q9NVE4 849 aa15.32■□□□□ 0.04
PPP4R3B-206ENST00000616407 NCAPD2Q15021 1401 aa15.32■□□□□ 0.04
PPP4R3B-206ENST00000616407 ZNF445P59923 1031 aa15.32■□□□□ 0.04
PPP4R3B-206ENST00000616407 ADCY9O60503 1353 aa15.32■□□□□ 0.04
PPP4R3B-206ENST00000616407 USP32Q8NFA0 1604 aa15.32■□□□□ 0.04
PPP4R3B-206ENST00000616407 PUM3Q15397 648 aaKnown RBP15.31■□□□□ 0.04
PPP4R3B-206ENST00000616407 ZBTB38Q8NAP3 1195 aaPredicted RBP15.31■□□□□ 0.04
PPP4R3B-206ENST00000616407 ZNF830Q96NB3 372 aaPredicted RBP15.31■□□□□ 0.04
PPP4R3B-206ENST00000616407 HEG1Q9ULI3 1381 aa15.31■□□□□ 0.04
PPP4R3B-206ENST00000616407 MBD4O95243 580 aa15.31■□□□□ 0.04
PPP4R3B-206ENST00000616407 ISM2Q6H9L7 571 aa15.31■□□□□ 0.04
PPP4R3B-206ENST00000616407 NAA16Q6N069 864 aaPredicted RBP15.31■□□□□ 0.04
PPP4R3B-206ENST00000616407 ZNF589Q86UQ0 364 aaPredicted RBP15.31■□□□□ 0.04
PPP4R3B-206ENST00000616407 GAS2L3Q86XJ1 694 aa15.31■□□□□ 0.04
PPP4R3B-206ENST00000616407 RGS12O14924 1447 aa15.31■□□□□ 0.04
PPP4R3B-206ENST00000616407 PCCAP05165 728 aaPredicted RBP15.31■□□□□ 0.04
PPP4R3B-206ENST00000616407 ANO6Q4KMQ2 910 aa15.31■□□□□ 0.04
PPP4R3B-206ENST00000616407 CDC37L1Q7L3B6 337 aa15.31■□□□□ 0.04
PPP4R3B-206ENST00000616407 CEP131Q9UPN4 1083 aa15.31■□□□□ 0.04
PPP4R3B-206ENST00000616407 SMTNL1A8MU46 457 aa15.31■□□□□ 0.04
PPP4R3B-206ENST00000616407 PARP10Q53GL7 1025 aa15.31■□□□□ 0.04
PPP4R3B-206ENST00000616407 CNNM2Q9H8M5 875 aa15.31■□□□□ 0.04
PPP4R3B-206ENST00000616407 CUL4AQ13619 759 aa15.3■□□□□ 0.04
PPP4R3B-206ENST00000616407 SOGA3Q5TF21 947 aa15.3■□□□□ 0.04
PPP4R3B-206ENST00000616407 C6orf229H3BNL8 230 aa15.3■□□□□ 0.04
PPP4R3B-206ENST00000616407 CLCN1P35523 988 aa15.3■□□□□ 0.04
PPP4R3B-206ENST00000616407 ZNF444Q8N0Y2 327 aaPredicted RBP15.3■□□□□ 0.04
PPP4R3B-206ENST00000616407 CLIP2Q9UDT6 1046 aa15.3■□□□□ 0.04
PPP4R3B-206ENST00000616407 ATP10DQ9P241 1426 aa15.3■□□□□ 0.04
PPP4R3B-206ENST00000616407 TSPY2A6NKD2 308 aa15.3■□□□□ 0.04
PPP4R3B-206ENST00000616407 TTLL5Q6EMB2 1281 aa15.3■□□□□ 0.04
PPP4R3B-206ENST00000616407 CNNM3Q8NE01 707 aa15.3■□□□□ 0.04
PPP4R3B-206ENST00000616407 FAM200AQ8TCP9 573 aa15.3■□□□□ 0.04
PPP4R3B-206ENST00000616407 ESR2Q92731 530 aa15.3■□□□□ 0.04
PPP4R3B-206ENST00000616407 B4E1Z4 1266 aa15.29■□□□□ 0.04
PPP4R3B-206ENST00000616407 MARCKSP29966 332 aaPredicted RBP15.29■□□□□ 0.04
PPP4R3B-206ENST00000616407 STX1AQ16623 288 aa15.29■□□□□ 0.04
PPP4R3B-206ENST00000616407 TPTE2Q6XPS3 522 aa15.29■□□□□ 0.04
PPP4R3B-206ENST00000616407 LPIN2Q92539 896 aa15.29■□□□□ 0.04
PPP4R3B-206ENST00000616407 DACH1Q9UI36 760 aa15.29■□□□□ 0.04
PPP4R3B-206ENST00000616407 ZBTB1Q9Y2K1 713 aa15.29■□□□□ 0.04
PPP4R3B-206ENST00000616407 C1orf167Q5SNV9 1468 aa15.29■□□□□ 0.04
PPP4R3B-206ENST00000616407 E7EWF7 191 aa15.29■□□□□ 0.04
PPP4R3B-206ENST00000616407 IPO7O95373 1038 aaKnown RBP15.29■□□□□ 0.04
PPP4R3B-206ENST00000616407 RBM5P52756 815 aaKnown RBP eCLIP15.29■□□□□ 0.04
PPP4R3B-206ENST00000616407 CTSWP56202 376 aa15.29■□□□□ 0.04
PPP4R3B-206ENST00000616407 FAM98CQ17RN3 349 aaKnown RBP15.29■□□□□ 0.04
PPP4R3B-206ENST00000616407 CFAP100Q494V2 611 aa15.29■□□□□ 0.04
PPP4R3B-206ENST00000616407 FILIP1LQ4L180 1135 aa15.29■□□□□ 0.04
PPP4R3B-206ENST00000616407 SIGLEC1Q9BZZ2 1709 aa15.29■□□□□ 0.04
PPP4R3B-206ENST00000616407 UQCRHLA0A096LP55 91 aa15.29■□□□□ 0.04
PPP4R3B-206ENST00000616407 UQCRHP07919 91 aa15.29■□□□□ 0.04
PPP4R3B-206ENST00000616407 TYRO3Q06418 890 aa15.29■□□□□ 0.04
PPP4R3B-206ENST00000616407 RTN1Q16799 776 aa15.29■□□□□ 0.04
PPP4R3B-206ENST00000616407 GIGYF2Q6Y7W6 1299 aaKnown RBP15.29■□□□□ 0.04
PPP4R3B-206ENST00000616407 DSCC1Q9BVC3 393 aa15.29■□□□□ 0.04
PPP4R3B-206ENST00000616407 DNAJC25Q9H1X3 360 aa15.29■□□□□ 0.04
PPP4R3B-206ENST00000616407 MRPS27Q92552 414 aaKnown RBP15.29■□□□□ 0.04
PPP4R3B-206ENST00000616407 MAP3K15Q6ZN16 1313 aa15.28■□□□□ 0.04
PPP4R3B-206ENST00000616407 HSPD1P10809 573 aaKnown RBP15.28■□□□□ 0.04
PPP4R3B-206ENST00000616407 ADORA1P30542 326 aa15.28■□□□□ 0.04
PPP4R3B-206ENST00000616407 GPT2Q8TD30 523 aa15.28■□□□□ 0.04
PPP4R3B-206ENST00000616407 KCNG4Q8TDN1 519 aa15.28■□□□□ 0.04
PPP4R3B-206ENST00000616407 PIGBQ92521 554 aa15.28■□□□□ 0.04
PPP4R3B-206ENST00000616407 ZKSCAN3Q9BRR0 538 aa15.28■□□□□ 0.04
PPP4R3B-206ENST00000616407 GREM2Q9H772 168 aa15.28■□□□□ 0.04
PPP4R3B-206ENST00000616407 MAGEB6P1A0A0J9YX57 407 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms