RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 SCARF1Q14162 830 aa16.38■□□□□ 0.21
CACNA1C-231ENST00000616390 HLFQ16534 295 aa16.38■□□□□ 0.21
CACNA1C-231ENST00000616390 DHX32Q7L7V1 743 aaKnown RBP16.38■□□□□ 0.21
CACNA1C-231ENST00000616390 OSBP2Q969R2 916 aa16.38■□□□□ 0.21
CACNA1C-231ENST00000616390 TTC12Q9H892 705 aaPredicted RBP16.38■□□□□ 0.21
CACNA1C-231ENST00000616390 GPHNQ9NQX3 736 aaPredicted RBP16.38■□□□□ 0.21
CACNA1C-231ENST00000616390 GLI3P10071 1580 aa16.38■□□□□ 0.21
CACNA1C-231ENST00000616390 JCADQ9P266 1359 aa16.38■□□□□ 0.21
CACNA1C-231ENST00000616390 FAM177BA6PVY3 158 aa16.38■□□□□ 0.21
CACNA1C-231ENST00000616390 E7EWF7 191 aa16.38■□□□□ 0.21
CACNA1C-231ENST00000616390 HELLSQ9NRZ9 838 aa16.38■□□□□ 0.21
CACNA1C-231ENST00000616390 SH3TC1Q8TE82 1336 aa16.38■□□□□ 0.21
CACNA1C-231ENST00000616390 OFD1O75665 1012 aa16.37■□□□□ 0.21
CACNA1C-231ENST00000616390 ZMYM1Q5SVZ6 1142 aa16.37■□□□□ 0.21
CACNA1C-231ENST00000616390 SPC24Q8NBT2 197 aa16.37■□□□□ 0.21
CACNA1C-231ENST00000616390 LEO1Q8WVC0 666 aaPredicted RBP16.37■□□□□ 0.21
CACNA1C-231ENST00000616390 FTOQ9C0B1 505 aaKnown RBP eCLIP16.37■□□□□ 0.21
CACNA1C-231ENST00000616390 NUP62CLQ9H1M0 184 aa16.37■□□□□ 0.21
CACNA1C-231ENST00000616390 IFIT5Q13325 482 aaKnown RBP16.37■□□□□ 0.21
CACNA1C-231ENST00000616390 C17orf53Q8N3J3 647 aaPredicted RBP16.37■□□□□ 0.21
CACNA1C-231ENST00000616390 XIRP1Q702N8 1843 aaKnown RBP16.37■□□□□ 0.21
CACNA1C-231ENST00000616390 PARP4Q9UKK3 1724 aaKnown RBP16.37■□□□□ 0.21
CACNA1C-231ENST00000616390 KCPQ6ZWJ8 1503 aa16.37■□□□□ 0.21
CACNA1C-231ENST00000616390 ZAP70P43403 619 aa16.37■□□□□ 0.21
CACNA1C-231ENST00000616390 NKX1-1Q15270 411 aaPredicted RBP16.37■□□□□ 0.21
CACNA1C-231ENST00000616390 ALDH8A1Q9H2A2 487 aaPredicted RBP16.37■□□□□ 0.21
CACNA1C-231ENST00000616390 TNMDQ9H2S6 317 aa16.37■□□□□ 0.21
CACNA1C-231ENST00000616390 LAMA4Q16363 1823 aa16.36■□□□□ 0.21
CACNA1C-231ENST00000616390 SOS2Q07890 1332 aaPredicted RBP16.36■□□□□ 0.21
CACNA1C-231ENST00000616390 DNTTIP2Q5QJE6 756 aaKnown RBP16.36■□□□□ 0.21
CACNA1C-231ENST00000616390 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.36■□□□□ 0.21
CACNA1C-231ENST00000616390 ISCA1Q9BUE6 129 aa16.36■□□□□ 0.21
CACNA1C-231ENST00000616390 SCAND2PQ9GZW5 306 aaPredicted RBP16.36■□□□□ 0.21
CACNA1C-231ENST00000616390 DNAJC5Q9H3Z4 198 aa16.36■□□□□ 0.21
CACNA1C-231ENST00000616390 CCDC192P0DO97 292 aa16.36■□□□□ 0.21
CACNA1C-231ENST00000616390 AP5Z1O43299 807 aa16.35■□□□□ 0.21
CACNA1C-231ENST00000616390 KDM4AO75164 1064 aa16.35■□□□□ 0.21
CACNA1C-231ENST00000616390 NR1I2O75469 434 aa16.35■□□□□ 0.21
CACNA1C-231ENST00000616390 MAP3K11Q16584 847 aa16.35■□□□□ 0.21
CACNA1C-231ENST00000616390 METTL24Q5JXM2 366 aa16.35■□□□□ 0.21
CACNA1C-231ENST00000616390 LDHAL6AQ6ZMR3 332 aa16.35■□□□□ 0.21
CACNA1C-231ENST00000616390 TBC1D2BQ9UPU7 963 aa16.35■□□□□ 0.21
CACNA1C-231ENST00000616390 PTPDC1A2A3K4 754 aa16.35■□□□□ 0.21
CACNA1C-231ENST00000616390 UVSSAQ2YD98 709 aa16.35■□□□□ 0.21
CACNA1C-231ENST00000616390 PGBD1Q96JS3 809 aa16.35■□□□□ 0.21
CACNA1C-231ENST00000616390 FUCA2Q9BTY2 467 aa16.35■□□□□ 0.21
CACNA1C-231ENST00000616390 DSCC1Q9BVC3 393 aa16.35■□□□□ 0.21
CACNA1C-231ENST00000616390 GPR108Q9NPR9 543 aa16.35■□□□□ 0.21
CACNA1C-231ENST00000616390 CNNM1Q9NRU3 951 aa16.35■□□□□ 0.21
CACNA1C-231ENST00000616390 ATG3Q9NT62 314 aa16.35■□□□□ 0.21
CACNA1C-231ENST00000616390 PALLDQ8WX93 1383 aa16.35■□□□□ 0.21
CACNA1C-231ENST00000616390 TJP1Q07157 1748 aa16.35■□□□□ 0.21
CACNA1C-231ENST00000616390 ZNF500O60304 480 aaPredicted RBP16.34■□□□□ 0.21
CACNA1C-231ENST00000616390 STARD3NLO95772 234 aa16.34■□□□□ 0.21
CACNA1C-231ENST00000616390 NUP188Q5SRE5 1749 aa16.34■□□□□ 0.21
CACNA1C-231ENST00000616390 LUZP1Q86V48 1076 aa16.34■□□□□ 0.21
CACNA1C-231ENST00000616390 GREM2Q9H772 168 aa16.34■□□□□ 0.21
CACNA1C-231ENST00000616390 NSUN7Q8NE18 718 aaKnown RBP16.34■□□□□ 0.21
CACNA1C-231ENST00000616390 PUS7LQ9H0K6 701 aaKnown RBP16.34■□□□□ 0.21
CACNA1C-231ENST00000616390 CTDNEP1O95476 244 aa16.33■□□□□ 0.21
CACNA1C-231ENST00000616390 ITGA6P23229 1130 aa16.33■□□□□ 0.21
CACNA1C-231ENST00000616390 RESTQ13127 1097 aa16.33■□□□□ 0.21
CACNA1C-231ENST00000616390 HELBQ8NG08 1087 aaPredicted RBP16.33■□□□□ 0.21
CACNA1C-231ENST00000616390 CIAO1O76071 339 aa16.33■□□□□ 0.2
CACNA1C-231ENST00000616390 HMGB1P09429 215 aaKnown RBP16.33■□□□□ 0.2
CACNA1C-231ENST00000616390 OTUD7BQ6GQQ9 843 aa16.33■□□□□ 0.2
CACNA1C-231ENST00000616390 AKAP2Q9Y2D5 859 aa16.33■□□□□ 0.2
CACNA1C-231ENST00000616390 PFKFB2O60825 505 aa16.32■□□□□ 0.2
CACNA1C-231ENST00000616390 TYRO3Q06418 890 aa16.32■□□□□ 0.2
CACNA1C-231ENST00000616390 TRMT112Q9UI30 125 aaKnown RBP16.32■□□□□ 0.2
CACNA1C-231ENST00000616390 ZBTB38Q8NAP3 1195 aaPredicted RBP16.32■□□□□ 0.2
CACNA1C-231ENST00000616390 FBXW7Q969H0 707 aa16.32■□□□□ 0.2
CACNA1C-231ENST00000616390 ABCC6O95255 1503 aa16.32■□□□□ 0.2
CACNA1C-231ENST00000616390 UBR2Q8IWV8 1755 aa16.32■□□□□ 0.2
CACNA1C-231ENST00000616390 RFX7Q2KHR2 1363 aa16.32■□□□□ 0.2
CACNA1C-231ENST00000616390 FGAP02671 866 aa16.32■□□□□ 0.2
CACNA1C-231ENST00000616390 PCCAP05165 728 aaPredicted RBP16.32■□□□□ 0.2
CACNA1C-231ENST00000616390 EXOSC10Q01780 885 aaKnown RBP16.32■□□□□ 0.2
CACNA1C-231ENST00000616390 KIAA2012Q0VF49 1180 aa16.32■□□□□ 0.2
CACNA1C-231ENST00000616390 ATP2B3Q16720 1220 aa16.32■□□□□ 0.2
CACNA1C-231ENST00000616390 ANO6Q4KMQ2 910 aa16.32■□□□□ 0.2
CACNA1C-231ENST00000616390 ZNF592Q92610 1267 aa16.32■□□□□ 0.2
CACNA1C-231ENST00000616390 APPP05067 770 aa16.31■□□□□ 0.2
CACNA1C-231ENST00000616390 PDIA3P30101 505 aaKnown RBP16.31■□□□□ 0.2
CACNA1C-231ENST00000616390 ZBTB1Q9Y2K1 713 aa16.31■□□□□ 0.2
CACNA1C-231ENST00000616390 MRVI1Q9Y6F6 885 aa16.31■□□□□ 0.2
CACNA1C-231ENST00000616390 ELP1O95163 1332 aa16.31■□□□□ 0.2
CACNA1C-231ENST00000616390 A0A087WWV3 80 aa16.31■□□□□ 0.2
CACNA1C-231ENST00000616390 IDH1O75874 414 aaKnown RBP16.31■□□□□ 0.2
CACNA1C-231ENST00000616390 TMED8Q6PL24 325 aaPredicted RBP16.31■□□□□ 0.2
CACNA1C-231ENST00000616390 SNAP23O00161 211 aa16.3■□□□□ 0.2
CACNA1C-231ENST00000616390 GIGYF2Q6Y7W6 1299 aaKnown RBP16.3■□□□□ 0.2
CACNA1C-231ENST00000616390 SLC4A9Q96Q91 983 aa16.3■□□□□ 0.2
CACNA1C-231ENST00000616390 GJB4Q9NTQ9 266 aa16.3■□□□□ 0.2
CACNA1C-231ENST00000616390 MAP3K15Q6ZN16 1313 aa16.3■□□□□ 0.2
CACNA1C-231ENST00000616390 IRS4O14654 1257 aaPredicted RBP16.3■□□□□ 0.2
CACNA1C-231ENST00000616390 IMMTQ16891 758 aaKnown RBP16.3■□□□□ 0.2
CACNA1C-231ENST00000616390 NLRP10Q86W26 655 aa16.3■□□□□ 0.2
CACNA1C-231ENST00000616390 DENND2AQ9ULE3 1009 aa16.3■□□□□ 0.2
CACNA1C-231ENST00000616390 MCAMP43121 646 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms