RNA–Protein interactions for RNA: ENST00000615520.1

LHX9-208, Transcript of LIM homeobox 9, humanhuman

Gene LHX9, Length 1,051 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX9-208ENST00000615520 CHD4Q14839 1912 aa22.41■■□□□ 1.18
LHX9-208ENST00000615520 KLRK1P26718 216 aa22.41■■□□□ 1.18
LHX9-208ENST00000615520 RNF181Q9P0P0 153 aa22.41■■□□□ 1.18
LHX9-208ENST00000615520 ZNF609O15014 1411 aa22.4■■□□□ 1.18
LHX9-208ENST00000615520 MED23Q9ULK4 1368 aa22.4■■□□□ 1.18
LHX9-208ENST00000615520 MYH13Q9UKX3 1938 aa22.4■■□□□ 1.18
LHX9-208ENST00000615520 LMNB1P20700 586 aa22.4■■□□□ 1.18
LHX9-208ENST00000615520 LPIN2Q92539 896 aa22.4■■□□□ 1.18
LHX9-208ENST00000615520 GCC1Q96CN9 775 aa22.4■■□□□ 1.18
LHX9-208ENST00000615520 CCDC136Q96JN2 1154 aa22.4■■□□□ 1.18
LHX9-208ENST00000615520 LRRCC1Q9C099 1032 aa22.4■■□□□ 1.18
LHX9-208ENST00000615520 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.4■■□□□ 1.18
LHX9-208ENST00000615520 A0A1B0GUL7 405 aa22.39■■□□□ 1.17
LHX9-208ENST00000615520 SMARCA5O60264 1052 aaPredicted RBP22.39■■□□□ 1.17
LHX9-208ENST00000615520 DOK7Q18PE1 504 aa22.39■■□□□ 1.17
LHX9-208ENST00000615520 VPS37DQ86XT2 251 aa22.39■■□□□ 1.17
LHX9-208ENST00000615520 TIMM10P62072 90 aa22.38■■□□□ 1.17
LHX9-208ENST00000615520 KIAA2012Q0VF49 1180 aa22.38■■□□□ 1.17
LHX9-208ENST00000615520 TNNI3KQ59H18 835 aa22.38■■□□□ 1.17
LHX9-208ENST00000615520 GORABQ5T7V8 394 aa22.38■■□□□ 1.17
LHX9-208ENST00000615520 C9orf131Q5VYM1 1079 aa22.38■■□□□ 1.17
LHX9-208ENST00000615520 B4GALNT3Q6L9W6 998 aa22.38■■□□□ 1.17
LHX9-208ENST00000615520 AACSQ86V21 672 aa22.38■■□□□ 1.17
LHX9-208ENST00000615520 NIM1KQ8IY84 436 aa22.38■■□□□ 1.17
LHX9-208ENST00000615520 CLASRPQ8N2M8 674 aaKnown RBP22.38■■□□□ 1.17
LHX9-208ENST00000615520 JDP2Q8WYK2 163 aa22.38■■□□□ 1.17
LHX9-208ENST00000615520 FPGT-TNNI3KV9GXZ4 949 aa22.38■■□□□ 1.17
LHX9-208ENST00000615520 FGFR2P21802 821 aa22.37■■□□□ 1.17
LHX9-208ENST00000615520 GYG1P46976 350 aa22.37■■□□□ 1.17
LHX9-208ENST00000615520 PRELPP51888 382 aa22.37■■□□□ 1.17
LHX9-208ENST00000615520 CAVIN4Q5BKX8 364 aa22.37■■□□□ 1.17
LHX9-208ENST00000615520 ANKRD45Q5TZF3 282 aa22.37■■□□□ 1.17
LHX9-208ENST00000615520 ERICH6BQ5W0A0 696 aa22.37■■□□□ 1.17
LHX9-208ENST00000615520 ZNF804AQ7Z570 1209 aa22.37■■□□□ 1.17
LHX9-208ENST00000615520 TXNRD3Q86VQ6 643 aa22.37■■□□□ 1.17
LHX9-208ENST00000615520 DBNDD1Q9H9R9 158 aa22.37■■□□□ 1.17
LHX9-208ENST00000615520 CCDC8Q9H0W5 538 aaPredicted RBP22.36■■□□□ 1.17
LHX9-208ENST00000615520 VPS33BQ9H267 617 aa22.36■■□□□ 1.17
LHX9-208ENST00000615520 IFIT2P09913 472 aaKnown RBP22.35■■□□□ 1.17
LHX9-208ENST00000615520 ADORA1P30542 326 aa22.35■■□□□ 1.17
LHX9-208ENST00000615520 GPR108Q9NPR9 543 aa22.35■■□□□ 1.17
LHX9-208ENST00000615520 COL4A5P29400 1685 aa22.35■■□□□ 1.17
LHX9-208ENST00000615520 ECE2O60344 883 aa22.34■■□□□ 1.17
LHX9-208ENST00000615520 FRAT2O75474 233 aaPredicted RBP22.34■■□□□ 1.17
LHX9-208ENST00000615520 HIBADHP31937 336 aaKnown RBP22.34■■□□□ 1.17
LHX9-208ENST00000615520 FBXW7Q969H0 707 aa22.34■■□□□ 1.17
LHX9-208ENST00000615520 XAGE2Q96GT9 111 aa22.34■■□□□ 1.17
LHX9-208ENST00000615520 PPP4R2Q9NY27 417 aa22.34■■□□□ 1.17
LHX9-208ENST00000615520 BCAMP50895 628 aa22.33■■□□□ 1.17
LHX9-208ENST00000615520 C15orf52Q6ZUT6 534 aaKnown RBP22.33■■□□□ 1.17
LHX9-208ENST00000615520 EAF2Q96CJ1 260 aaPredicted RBP22.33■■□□□ 1.17
LHX9-208ENST00000615520 COA1Q9GZY4 146 aa22.33■■□□□ 1.17
LHX9-208ENST00000615520 GOLGB1Q14789 3259 aaKnown RBP22.33■■□□□ 1.16
LHX9-208ENST00000615520 SMC5Q8IY18 1101 aa22.32■■□□□ 1.16
LHX9-208ENST00000615520 FAM84BQ96KN1 310 aaPredicted RBP22.32■■□□□ 1.16
LHX9-208ENST00000615520 DBNDD2Q9BQY9 259 aa22.32■■□□□ 1.16
LHX9-208ENST00000615520 TLR7Q9NYK1 1049 aaKnown RBP22.32■■□□□ 1.16
LHX9-208ENST00000615520 IQSEC3Q9UPP2 1182 aaPredicted RBP22.32■■□□□ 1.16
LHX9-208ENST00000615520 IRS2Q9Y4H2 1338 aa22.31■■□□□ 1.16
LHX9-208ENST00000615520 TTC39AQ5SRH9 613 aa22.31■■□□□ 1.16
LHX9-208ENST00000615520 GNL3LQ9NVN8 582 aaKnown RBP22.31■■□□□ 1.16
LHX9-208ENST00000615520 ZNRF3Q9ULT6 936 aa22.31■■□□□ 1.16
LHX9-208ENST00000615520 PHKA1P46020 1223 aa22.3■■□□□ 1.16
LHX9-208ENST00000615520 EIF6P56537 245 aaKnown RBP22.3■■□□□ 1.16
LHX9-208ENST00000615520 CCDC158Q5M9N0 1113 aa22.3■■□□□ 1.16
LHX9-208ENST00000615520 LNPKQ9C0E8 428 aa22.3■■□□□ 1.16
LHX9-208ENST00000615520 CD209Q9NNX6 404 aa22.3■■□□□ 1.16
LHX9-208ENST00000615520 DBNLQ9UJU6 430 aaKnown RBP22.3■■□□□ 1.16
LHX9-208ENST00000615520 SCN9AQ15858 1988 aa22.3■■□□□ 1.16
LHX9-208ENST00000615520 PSME4Q14997 1843 aa22.29■■□□□ 1.16
LHX9-208ENST00000615520 CCDC102BQ68D86 513 aa22.29■■□□□ 1.16
LHX9-208ENST00000615520 CENPQQ7L2Z9 268 aaPredicted RBP22.29■■□□□ 1.16
LHX9-208ENST00000615520 RAD17O75943 681 aa22.28■■□□□ 1.16
LHX9-208ENST00000615520 CHAF1AQ13111 956 aaPredicted RBP22.28■■□□□ 1.16
LHX9-208ENST00000615520 FBXO33Q7Z6M2 555 aa22.28■■□□□ 1.16
LHX9-208ENST00000615520 JAG2Q9Y219 1238 aa22.28■■□□□ 1.16
LHX9-208ENST00000615520 YDJCA8MPS7 323 aa22.27■■□□□ 1.16
LHX9-208ENST00000615520 PODNQ7Z5L7 613 aa22.27■■□□□ 1.16
LHX9-208ENST00000615520 CHD1LQ86WJ1 897 aa22.27■■□□□ 1.16
LHX9-208ENST00000615520 GPATCH3Q96I76 525 aa22.27■■□□□ 1.16
LHX9-208ENST00000615520 GJA3Q9Y6H8 435 aa22.27■■□□□ 1.16
LHX9-208ENST00000615520 NUCB1Q02818 461 aa22.26■■□□□ 1.15
LHX9-208ENST00000615520 C16orf71Q8IYS4 520 aaPredicted RBP22.26■■□□□ 1.15
LHX9-208ENST00000615520 KCNQ5Q9NR82 932 aa22.26■■□□□ 1.15
LHX9-208ENST00000615520 ZNF541Q9H0D2 1346 aa22.26■■□□□ 1.15
LHX9-208ENST00000615520 UQCRFS1P1P0C7P4 283 aa22.25■■□□□ 1.15
LHX9-208ENST00000615520 IL1R1P14778 569 aa22.25■■□□□ 1.15
LHX9-208ENST00000615520 GTF2IP78347 998 aa22.25■■□□□ 1.15
LHX9-208ENST00000615520 CIAPIN1Q6FI81 312 aa22.25■■□□□ 1.15
LHX9-208ENST00000615520 TDRD7Q8NHU6 1098 aaKnown RBP22.25■■□□□ 1.15
LHX9-208ENST00000615520 KDM2BQ8NHM5 1336 aa22.25■■□□□ 1.15
LHX9-208ENST00000615520 USP17L3A6NCW0 530 aa22.24■■□□□ 1.15
LHX9-208ENST00000615520 USP17L4A6NCW7 530 aa22.24■■□□□ 1.15
LHX9-208ENST00000615520 FZD9O00144 591 aa22.24■■□□□ 1.15
LHX9-208ENST00000615520 CXCL9Q07325 125 aa22.24■■□□□ 1.15
LHX9-208ENST00000615520 USP17L1Q7RTZ2 530 aa22.24■■□□□ 1.15
LHX9-208ENST00000615520 ZNF646O15015 1829 aaPredicted RBP22.23■■□□□ 1.15
LHX9-208ENST00000615520 TNIP1Q15025 636 aa22.23■■□□□ 1.15
LHX9-208ENST00000615520 TTLL5Q6EMB2 1281 aa22.23■■□□□ 1.15
LHX9-208ENST00000615520 OTUD7AQ8TE49 926 aaPredicted RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 904 ms