RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 CHMP4BP1P59074 171 aa11.23□□□□□ -0.61
TNFRSF9-204ENST00000615230 PLA2R1Q13018 1463 aa11.23□□□□□ -0.61
TNFRSF9-204ENST00000615230 RTN1Q16799 776 aa11.22□□□□□ -0.61
TNFRSF9-204ENST00000615230 BMP2KLQ5H9B9 411 aa11.22□□□□□ -0.61
TNFRSF9-204ENST00000615230 SPATA31A3Q5VYP0 1347 aa11.22□□□□□ -0.61
TNFRSF9-204ENST00000615230 CLTCQ00610 1675 aaKnown RBP11.22□□□□□ -0.61
TNFRSF9-204ENST00000615230 SMARCA5O60264 1052 aaPredicted RBP11.22□□□□□ -0.61
TNFRSF9-204ENST00000615230 GCKRQ14397 625 aa11.22□□□□□ -0.61
TNFRSF9-204ENST00000615230 PLS1Q14651 629 aa11.22□□□□□ -0.61
TNFRSF9-204ENST00000615230 SEPT12Q8IYM1 358 aa11.22□□□□□ -0.61
TNFRSF9-204ENST00000615230 RTKN2Q8IZC4 609 aa11.22□□□□□ -0.61
TNFRSF9-204ENST00000615230 SPHKAPQ2M3C7 1700 aa11.22□□□□□ -0.61
TNFRSF9-204ENST00000615230 PIBF1Q8WXW3 757 aa11.22□□□□□ -0.61
TNFRSF9-204ENST00000615230 MCM9Q9NXL9 1143 aa11.22□□□□□ -0.61
TNFRSF9-204ENST00000615230 AFF2P51816 1311 aa11.22□□□□□ -0.61
TNFRSF9-204ENST00000615230 ADRA2BP18089 450 aa11.22□□□□□ -0.61
TNFRSF9-204ENST00000615230 IL6STP40189 918 aaPredicted RBP11.22□□□□□ -0.61
TNFRSF9-204ENST00000615230 FERMT1Q9BQL6 677 aa11.22□□□□□ -0.61
TNFRSF9-204ENST00000615230 RNF17Q9BXT8 1623 aaKnown RBP11.22□□□□□ -0.61
TNFRSF9-204ENST00000615230 SEMA3EO15041 775 aa11.22□□□□□ -0.61
TNFRSF9-204ENST00000615230 ZBTB43O43298 467 aa11.22□□□□□ -0.61
TNFRSF9-204ENST00000615230 PRKCSHP14314 528 aaPredicted RBP11.21□□□□□ -0.61
TNFRSF9-204ENST00000615230 ANAPC15P60006 121 aa11.21□□□□□ -0.61
TNFRSF9-204ENST00000615230 MAGEB6Q8N7X4 407 aa11.21□□□□□ -0.61
TNFRSF9-204ENST00000615230 ATP10DQ9P241 1426 aa11.21□□□□□ -0.61
TNFRSF9-204ENST00000615230 SPC25Q9HBM1 224 aa11.21□□□□□ -0.61
TNFRSF9-204ENST00000615230 KCNG1Q9UIX4 513 aa11.21□□□□□ -0.61
TNFRSF9-204ENST00000615230 PRDM15P57071 1507 aaPredicted RBP11.21□□□□□ -0.61
TNFRSF9-204ENST00000615230 PARP1P09874 1014 aaKnown RBP11.21□□□□□ -0.62
TNFRSF9-204ENST00000615230 SSFA2P28290 1259 aa11.21□□□□□ -0.62
TNFRSF9-204ENST00000615230 MNS1Q8NEH6 495 aa11.21□□□□□ -0.62
TNFRSF9-204ENST00000615230 STX8Q9UNK0 236 aa11.21□□□□□ -0.62
TNFRSF9-204ENST00000615230 USP16Q9Y5T5 823 aa11.21□□□□□ -0.62
TNFRSF9-204ENST00000615230 FIBPO43427 364 aa11.21□□□□□ -0.62
TNFRSF9-204ENST00000615230 CKAP2LQ8IYA6 745 aa11.21□□□□□ -0.62
TNFRSF9-204ENST00000615230 ZSCAN16Q9H4T2 348 aaPredicted RBP11.21□□□□□ -0.62
TNFRSF9-204ENST00000615230 KDRP35968 1356 aa11.21□□□□□ -0.62
TNFRSF9-204ENST00000615230 RNF123Q5XPI4 1314 aa11.21□□□□□ -0.62
TNFRSF9-204ENST00000615230 ANKRD62A6NC57 917 aa11.21□□□□□ -0.62
TNFRSF9-204ENST00000615230 PPP2R5BQ15173 497 aa11.21□□□□□ -0.62
TNFRSF9-204ENST00000615230 GPHNQ9NQX3 736 aaPredicted RBP11.21□□□□□ -0.62
TNFRSF9-204ENST00000615230 PPEF1O14829 653 aaPredicted RBP11.2□□□□□ -0.62
TNFRSF9-204ENST00000615230 LPXNO60711 386 aa11.2□□□□□ -0.62
TNFRSF9-204ENST00000615230 TMED8Q6PL24 325 aaPredicted RBP11.2□□□□□ -0.62
TNFRSF9-204ENST00000615230 BRINP3Q76B58 766 aa11.2□□□□□ -0.62
TNFRSF9-204ENST00000615230 ARHGEF25Q86VW2 580 aa11.2□□□□□ -0.62
TNFRSF9-204ENST00000615230 NUP62CLQ9H1M0 184 aa11.2□□□□□ -0.62
TNFRSF9-204ENST00000615230 TULP4Q9NRJ4 1543 aa11.2□□□□□ -0.62
TNFRSF9-204ENST00000615230 CCDC93Q567U6 631 aa11.2□□□□□ -0.62
TNFRSF9-204ENST00000615230 SNRKQ9NRH2 765 aa11.2□□□□□ -0.62
TNFRSF9-204ENST00000615230 CEBPZQ03701 1054 aaKnown RBP11.2□□□□□ -0.62
TNFRSF9-204ENST00000615230 SULF1Q8IWU6 871 aa11.2□□□□□ -0.62
TNFRSF9-204ENST00000615230 TRIM5Q9C035 493 aa11.2□□□□□ -0.62
TNFRSF9-204ENST00000615230 LEMD3Q9Y2U8 911 aa11.2□□□□□ -0.62
TNFRSF9-204ENST00000615230 PTCH1Q13635 1447 aa11.2□□□□□ -0.62
TNFRSF9-204ENST00000615230 LOC102724428A0A0B4J2F2 783 aa11.2□□□□□ -0.62
TNFRSF9-204ENST00000615230 NAPAP54920 295 aa11.2□□□□□ -0.62
TNFRSF9-204ENST00000615230 SIK1P57059 783 aa11.2□□□□□ -0.62
TNFRSF9-204ENST00000615230 ZRSR2Q15696 482 aaKnown RBP11.2□□□□□ -0.62
TNFRSF9-204ENST00000615230 EAPPQ56P03 285 aaPredicted RBP11.2□□□□□ -0.62
TNFRSF9-204ENST00000615230 NOM1Q5C9Z4 860 aaKnown RBP11.2□□□□□ -0.62
TNFRSF9-204ENST00000615230 DALRD3Q5D0E6 543 aaKnown RBP11.2□□□□□ -0.62
TNFRSF9-204ENST00000615230 CCDC174Q6PII3 467 aa11.2□□□□□ -0.62
TNFRSF9-204ENST00000615230 C8orf58Q8NAV2 365 aa11.2□□□□□ -0.62
TNFRSF9-204ENST00000615230 ROBO2Q9HCK4 1378 aa11.2□□□□□ -0.62
TNFRSF9-204ENST00000615230 DNAJC10Q8IXB1 793 aa11.19□□□□□ -0.62
TNFRSF9-204ENST00000615230 VSIG10Q8N0Z9 540 aa11.19□□□□□ -0.62
TNFRSF9-204ENST00000615230 TEKT1Q969V4 418 aa11.19□□□□□ -0.62
TNFRSF9-204ENST00000615230 BICD1Q96G01 975 aa11.19□□□□□ -0.62
TNFRSF9-204ENST00000615230 MAP3K15Q6ZN16 1313 aa11.19□□□□□ -0.62
TNFRSF9-204ENST00000615230 ARMC9Q7Z3E5 817 aa11.19□□□□□ -0.62
TNFRSF9-204ENST00000615230 CTSWP56202 376 aa11.19□□□□□ -0.62
TNFRSF9-204ENST00000615230 NUCB1Q02818 461 aa11.19□□□□□ -0.62
TNFRSF9-204ENST00000615230 SYCP3Q8IZU3 236 aa11.19□□□□□ -0.62
TNFRSF9-204ENST00000615230 PLEKHG2Q9H7P9 1386 aa11.19□□□□□ -0.62
TNFRSF9-204ENST00000615230 CDK12Q9NYV4 1490 aaPredicted RBP11.19□□□□□ -0.62
TNFRSF9-204ENST00000615230 EIF5P55010 431 aaKnown RBP11.19□□□□□ -0.62
TNFRSF9-204ENST00000615230 FMNL3Q8IVF7 1028 aa11.19□□□□□ -0.62
TNFRSF9-204ENST00000615230 BICC1Q9H694 974 aaKnown RBP11.19□□□□□ -0.62
TNFRSF9-204ENST00000615230 BBOX1O75936 387 aa11.18□□□□□ -0.62
TNFRSF9-204ENST00000615230 TRIM37O94972 964 aa11.18□□□□□ -0.62
TNFRSF9-204ENST00000615230 IRX3P78415 501 aaPredicted RBP11.18□□□□□ -0.62
TNFRSF9-204ENST00000615230 VAT1LQ9HCJ6 419 aa11.18□□□□□ -0.62
TNFRSF9-204ENST00000615230 SEPT11Q9NVA2 429 aaKnown RBP11.18□□□□□ -0.62
TNFRSF9-204ENST00000615230 SPATA31E1Q6ZUB1 1445 aa11.18□□□□□ -0.62
TNFRSF9-204ENST00000615230 ERVV-1B6SEH8 477 aa11.18□□□□□ -0.62
TNFRSF9-204ENST00000615230 CHL1O00533 1208 aa11.18□□□□□ -0.62
TNFRSF9-204ENST00000615230 RBM25P49756 843 aaKnown RBP11.18□□□□□ -0.62
TNFRSF9-204ENST00000615230 TFCP2Q12800 502 aa11.18□□□□□ -0.62
TNFRSF9-204ENST00000615230 PCCAP05165 728 aaPredicted RBP11.18□□□□□ -0.62
TNFRSF9-204ENST00000615230 VAMP4O75379 141 aa11.18□□□□□ -0.62
TNFRSF9-204ENST00000615230 RPS8P62241 208 aaKnown RBP11.18□□□□□ -0.62
TNFRSF9-204ENST00000615230 MAP3K9P80192 1104 aa11.18□□□□□ -0.62
TNFRSF9-204ENST00000615230 CARD14Q9BXL6 1004 aa11.18□□□□□ -0.62
TNFRSF9-204ENST00000615230 SLC26A6Q9BXS9 759 aa11.18□□□□□ -0.62
TNFRSF9-204ENST00000615230 XDHP47989 1333 aa11.18□□□□□ -0.62
TNFRSF9-204ENST00000615230 OSBPP22059 807 aa11.18□□□□□ -0.62
TNFRSF9-204ENST00000615230 NT5C2P49902 561 aa11.18□□□□□ -0.62
TNFRSF9-204ENST00000615230 BMS1Q14692 1282 aaKnown RBP11.18□□□□□ -0.62
TNFRSF9-204ENST00000615230 SUPT20HL1Q3ZLR7 823 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms