RNA–Protein interactions for RNA: ENST00000614293.4

ABCA2-223, Transcript of ATP binding cassette subfamily A member 2, human

TSL 5 BASIC

Gene ABCA2, Length 8,146 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-223	ENST00000614293	CCT6A	P40227	531 aa	Known RBP	13.79	□□□□□ -0.2
ABCA2-223	ENST00000614293	ELMSAN1	Q6PJG2	1045 aa		13.79	□□□□□ -0.2
ABCA2-223	ENST00000614293	FRMD4B	Q9Y2L6	1034 aa		13.79	□□□□□ -0.2
ABCA2-223	ENST00000614293	HEATR3	Q7Z4Q2	680 aa		13.79	□□□□□ -0.2
ABCA2-223	ENST00000614293	GPATCH11	Q8N954	259 aa		13.79	□□□□□ -0.2
ABCA2-223	ENST00000614293	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.79	□□□□□ -0.2
ABCA2-223	ENST00000614293	PDZRN3	Q9UPQ7	1066 aa		13.79	□□□□□ -0.2
ABCA2-223	ENST00000614293	TRO	Q12816	1431 aa	Predicted RBP	13.78	□□□□□ -0.2
ABCA2-223	ENST00000614293	PEG3	Q9GZU2	1588 aa		13.78	□□□□□ -0.2
ABCA2-223	ENST00000614293	GOLGA6C	A6NDK9	693 aa		13.78	□□□□□ -0.2
ABCA2-223	ENST00000614293	GOLGA6B	A6NDN3	693 aa		13.78	□□□□□ -0.2
ABCA2-223	ENST00000614293	GOLGA6D	P0CG33	693 aa		13.78	□□□□□ -0.2
ABCA2-223	ENST00000614293	AFAP1	Q8N556	730 aa		13.78	□□□□□ -0.2
ABCA2-223	ENST00000614293	GOLGA6A	Q9NYA3	693 aa		13.78	□□□□□ -0.2
ABCA2-223	ENST00000614293	TTC21B	Q7Z4L5	1316 aa		13.78	□□□□□ -0.2
ABCA2-223	ENST00000614293	PDE6B	P35913	854 aa		13.78	□□□□□ -0.2
ABCA2-223	ENST00000614293	PICALM	Q13492	652 aa		13.78	□□□□□ -0.2
ABCA2-223	ENST00000614293	CCDC183	Q5T5S1	534 aa		13.78	□□□□□ -0.2
ABCA2-223	ENST00000614293	TPTE2	Q6XPS3	522 aa		13.78	□□□□□ -0.2
ABCA2-223	ENST00000614293	VPS52	Q8N1B4	723 aa		13.78	□□□□□ -0.2
ABCA2-223	ENST00000614293	GTF3C6	Q969F1	213 aa		13.78	□□□□□ -0.2
ABCA2-223	ENST00000614293	NBPF3	Q9H094	633 aa		13.78	□□□□□ -0.2
ABCA2-223	ENST00000614293	AGTPBP1	Q9UPW5	1226 aa		13.78	□□□□□ -0.2
ABCA2-223	ENST00000614293	PPP2R1A	P30153	589 aa		13.78	□□□□□ -0.2
ABCA2-223	ENST00000614293	BACH2	Q9BYV9	841 aa		13.78	□□□□□ -0.2
ABCA2-223	ENST00000614293	ZNF408	Q9H9D4	720 aa		13.78	□□□□□ -0.2
ABCA2-223	ENST00000614293	AKNA	Q7Z591	1439 aa		13.78	□□□□□ -0.2
ABCA2-223	ENST00000614293	IFT74	Q96LB3	600 aa		13.78	□□□□□ -0.2
ABCA2-223	ENST00000614293	RIOK1	Q9BRS2	568 aa	Known RBP	13.78	□□□□□ -0.2
ABCA2-223	ENST00000614293	IL1RAPL2	Q9NP60	686 aa		13.78	□□□□□ -0.2
ABCA2-223	ENST00000614293	EIF2AK4	Q9P2K8	1649 aa	Known RBP	13.78	□□□□□ -0.2
ABCA2-223	ENST00000614293	ZFY	P08048	801 aa	Predicted RBP	13.77	□□□□□ -0.2
ABCA2-223	ENST00000614293	GNAT2	P19087	354 aa		13.77	□□□□□ -0.2
ABCA2-223	ENST00000614293	TUBB4B	P68371	445 aa		13.77	□□□□□ -0.2
ABCA2-223	ENST00000614293	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	13.77	□□□□□ -0.2
ABCA2-223	ENST00000614293	WDR7	Q9Y4E6	1490 aa		13.77	□□□□□ -0.2
ABCA2-223	ENST00000614293	CYLC1	P35663	651 aa	Predicted RBP	13.77	□□□□□ -0.2
ABCA2-223	ENST00000614293	PLCB3	Q01970	1234 aa		13.77	□□□□□ -0.2
ABCA2-223	ENST00000614293	HMG20B	Q9P0W2	317 aa		13.77	□□□□□ -0.2
ABCA2-223	ENST00000614293		F8W031	263 aa	Predicted RBP	13.77	□□□□□ -0.2
ABCA2-223	ENST00000614293	ADAMTS8	Q9UP79	889 aa		13.77	□□□□□ -0.2
ABCA2-223	ENST00000614293	PTPRC	P08575	1304 aa		13.77	□□□□□ -0.2
ABCA2-223	ENST00000614293	SETSIP	P0DME0	302 aa		13.77	□□□□□ -0.21
ABCA2-223	ENST00000614293	MX1	P20591	662 aa		13.77	□□□□□ -0.21
ABCA2-223	ENST00000614293	NAPA	P54920	295 aa		13.77	□□□□□ -0.21
ABCA2-223	ENST00000614293	ANKRD2	Q9GZV1	360 aa		13.77	□□□□□ -0.21
ABCA2-223	ENST00000614293	STX1A	Q16623	288 aa		13.77	□□□□□ -0.21
ABCA2-223	ENST00000614293	PPFIBP2	Q8ND30	876 aa		13.77	□□□□□ -0.21
ABCA2-223	ENST00000614293	ATP5J2-PTCD1	G3V325	749 aa		13.77	□□□□□ -0.21
ABCA2-223	ENST00000614293	TACC3	Q9Y6A5	838 aa		13.77	□□□□□ -0.21
ABCA2-223	ENST00000614293	TTC36	A6NLP5	189 aa		13.76	□□□□□ -0.21
ABCA2-223	ENST00000614293	FNBP1	Q96RU3	617 aa		13.76	□□□□□ -0.21
ABCA2-223	ENST00000614293	RTL9	Q8NET4	1388 aa		13.76	□□□□□ -0.21
ABCA2-223	ENST00000614293	NAA16	Q6N069	864 aa	Predicted RBP	13.76	□□□□□ -0.21
ABCA2-223	ENST00000614293	DPY19L2	Q6NUT2	758 aa		13.76	□□□□□ -0.21
ABCA2-223	ENST00000614293	CERS3	Q8IU89	383 aa		13.76	□□□□□ -0.21
ABCA2-223	ENST00000614293	RPUSD2	Q8IZ73	545 aa	Known RBP	13.76	□□□□□ -0.21
ABCA2-223	ENST00000614293	MCM4	P33991	863 aa		13.76	□□□□□ -0.21
ABCA2-223	ENST00000614293	DNM2	P50570	870 aa		13.76	□□□□□ -0.21
ABCA2-223	ENST00000614293	PHF8	Q9UPP1	1060 aa		13.76	□□□□□ -0.21
ABCA2-223	ENST00000614293	RAB11FIP4	Q86YS3	637 aa		13.76	□□□□□ -0.21
ABCA2-223	ENST00000614293	STRN3	Q13033	797 aa		13.76	□□□□□ -0.21
ABCA2-223	ENST00000614293	SUPT20H	Q8NEM7	779 aa		13.75	□□□□□ -0.21
ABCA2-223	ENST00000614293	BICDL2	A1A5D9	508 aa		13.75	□□□□□ -0.21
ABCA2-223	ENST00000614293	GNA11	P29992	359 aa		13.75	□□□□□ -0.21
ABCA2-223	ENST00000614293	SEPT6	Q14141	434 aa		13.75	□□□□□ -0.21
ABCA2-223	ENST00000614293	RASA3	Q14644	834 aa		13.75	□□□□□ -0.21
ABCA2-223	ENST00000614293	TSR2	Q969E8	191 aa	Known RBP	13.75	□□□□□ -0.21
ABCA2-223	ENST00000614293	NOX5	Q96PH1	765 aa		13.75	□□□□□ -0.21
ABCA2-223	ENST00000614293	INF2	Q27J81	1249 aa		13.75	□□□□□ -0.21
ABCA2-223	ENST00000614293	SNRPA1	P09661	255 aa	Known RBP	13.75	□□□□□ -0.21
ABCA2-223	ENST00000614293	DDB1	Q16531	1140 aa		13.75	□□□□□ -0.21
ABCA2-223	ENST00000614293	SLC4A8	Q2Y0W8	1093 aa		13.75	□□□□□ -0.21
ABCA2-223	ENST00000614293	NUTM1	Q86Y26	1132 aa		13.75	□□□□□ -0.21
ABCA2-223	ENST00000614293	ZNF830	Q96NB3	372 aa	Predicted RBP	13.75	□□□□□ -0.21
ABCA2-223	ENST00000614293	SLC26A6	Q9BXS9	759 aa		13.75	□□□□□ -0.21
ABCA2-223	ENST00000614293	RBM28	Q9NW13	759 aa	Known RBP	13.75	□□□□□ -0.21
ABCA2-223	ENST00000614293	CCDC160	A6NGH7	325 aa		13.75	□□□□□ -0.21
ABCA2-223	ENST00000614293	OTUD7B	Q6GQQ9	843 aa		13.75	□□□□□ -0.21
ABCA2-223	ENST00000614293	PAXBP1	Q9Y5B6	917 aa		13.75	□□□□□ -0.21
ABCA2-223	ENST00000614293	EIF4G3	O43432	1585 aa	Known RBP	13.75	□□□□□ -0.21
ABCA2-223	ENST00000614293	CAVIN2	O95810	425 aa		13.74	□□□□□ -0.21
ABCA2-223	ENST00000614293	IPO4	Q8TEX9	1081 aa	Known RBP	13.74	□□□□□ -0.21
ABCA2-223	ENST00000614293	CARD10	Q9BWT7	1032 aa		13.74	□□□□□ -0.21
ABCA2-223	ENST00000614293	TRPC3	Q13507	836 aa		13.74	□□□□□ -0.21
ABCA2-223	ENST00000614293	CAMK4	Q16566	473 aa		13.74	□□□□□ -0.21
ABCA2-223	ENST00000614293	MSL1	Q68DK7	614 aa		13.74	□□□□□ -0.21
ABCA2-223	ENST00000614293	MAST3	O60307	1309 aa		13.74	□□□□□ -0.21
ABCA2-223	ENST00000614293	ECM2	O94769	699 aa	Predicted RBP	13.74	□□□□□ -0.21
ABCA2-223	ENST00000614293	PSPC1	Q8WXF1	523 aa	Known RBP	13.74	□□□□□ -0.21
ABCA2-223	ENST00000614293	ATP6V0A2	Q9Y487	856 aa		13.74	□□□□□ -0.21
ABCA2-223	ENST00000614293	PALM3	A6NDB9	673 aa	Predicted RBP	13.74	□□□□□ -0.21
ABCA2-223	ENST00000614293	URI1	O94763	535 aa	Predicted RBP	13.74	□□□□□ -0.21
ABCA2-223	ENST00000614293	CYP7A1	P22680	504 aa		13.74	□□□□□ -0.21
ABCA2-223	ENST00000614293	C11orf95	C9JLR9	678 aa	Predicted RBP	13.74	□□□□□ -0.21
ABCA2-223	ENST00000614293	CLCN1	P35523	988 aa		13.74	□□□□□ -0.21
ABCA2-223	ENST00000614293	CCDC102B	Q68D86	513 aa		13.74	□□□□□ -0.21
ABCA2-223	ENST00000614293	PSMA7	O14818	248 aa		13.73	□□□□□ -0.21
ABCA2-223	ENST00000614293	RPL13	P26373	211 aa	Known RBP	13.73	□□□□□ -0.21
ABCA2-223	ENST00000614293	CCDC65	Q8IXS2	484 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms