RNA–Protein interactions for RNA: ENST00000613462.1

SRGAP2C-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 484 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-204ENST00000613462 AOC3Q16853 763 aa16.04■□□□□ 0.16
SRGAP2C-204ENST00000613462 NIM1KQ8IY84 436 aa16.04■□□□□ 0.16
SRGAP2C-204ENST00000613462 HELBQ8NG08 1087 aaPredicted RBP16.04■□□□□ 0.16
SRGAP2C-204ENST00000613462 COL4A5P29400 1685 aa16.04■□□□□ 0.16
SRGAP2C-204ENST00000613462 ZNF646O15015 1829 aaPredicted RBP16.03■□□□□ 0.16
SRGAP2C-204ENST00000613462 IFIT1P09914 478 aaKnown RBP16.03■□□□□ 0.16
SRGAP2C-204ENST00000613462 SLC5A1P13866 664 aa16.03■□□□□ 0.16
SRGAP2C-204ENST00000613462 IRX6P78412 446 aaPredicted RBP16.03■□□□□ 0.16
SRGAP2C-204ENST00000613462 LPIN2Q92539 896 aa16.03■□□□□ 0.16
SRGAP2C-204ENST00000613462 PCDHB15Q9Y5E8 787 aa16.03■□□□□ 0.16
SRGAP2C-204ENST00000613462 ZNF609O15014 1411 aa16.02■□□□□ 0.16
SRGAP2C-204ENST00000613462 G3V3G9 751 aa16.02■□□□□ 0.16
SRGAP2C-204ENST00000613462 RAB11FIP3O75154 756 aa16.02■□□□□ 0.16
SRGAP2C-204ENST00000613462 APLP1P51693 650 aa16.02■□□□□ 0.16
SRGAP2C-204ENST00000613462 HDAC1Q13547 482 aaPredicted RBP16.02■□□□□ 0.16
SRGAP2C-204ENST00000613462 ATP2B3Q16720 1220 aa16.02■□□□□ 0.16
SRGAP2C-204ENST00000613462 DCAF8Q5TAQ9 597 aa16.02■□□□□ 0.16
SRGAP2C-204ENST00000613462 ZNF804AQ7Z570 1209 aa16.02■□□□□ 0.16
SRGAP2C-204ENST00000613462 IRS2Q9Y4H2 1338 aa16.01■□□□□ 0.15
SRGAP2C-204ENST00000613462 RIMBP2O15034 1052 aa16.01■□□□□ 0.15
SRGAP2C-204ENST00000613462 FGFR2P21802 821 aa16.01■□□□□ 0.15
SRGAP2C-204ENST00000613462 TFCP2Q12800 502 aa16.01■□□□□ 0.15
SRGAP2C-204ENST00000613462 COA1Q9GZY4 146 aa16.01■□□□□ 0.15
SRGAP2C-204ENST00000613462 GPR108Q9NPR9 543 aa16.01■□□□□ 0.15
SRGAP2C-204ENST00000613462 ZNRF3Q9ULT6 936 aa16.01■□□□□ 0.15
SRGAP2C-204ENST00000613462 EXOC6BQ9Y2D4 811 aa16.01■□□□□ 0.15
SRGAP2C-204ENST00000613462 SCN4AP35499 1836 aa16.01■□□□□ 0.15
SRGAP2C-204ENST00000613462 FZD9O00144 591 aa16■□□□□ 0.15
SRGAP2C-204ENST00000613462 SASH1O94885 1247 aa16■□□□□ 0.15
SRGAP2C-204ENST00000613462 CAVIN4Q5BKX8 364 aa16■□□□□ 0.15
SRGAP2C-204ENST00000613462 PODNQ7Z5L7 613 aa16■□□□□ 0.15
SRGAP2C-204ENST00000613462 KIF1BPQ96EK5 621 aa16■□□□□ 0.15
SRGAP2C-204ENST00000613462 GPR101Q96P66 508 aaPredicted RBP16■□□□□ 0.15
SRGAP2C-204ENST00000613462 RWDD1Q9H446 243 aaPredicted RBP16■□□□□ 0.15
SRGAP2C-204ENST00000613462 DCTPP1Q9H773 170 aa16■□□□□ 0.15
SRGAP2C-204ENST00000613462 ECE2O60344 883 aa15.99■□□□□ 0.15
SRGAP2C-204ENST00000613462 EIF6P56537 245 aaKnown RBP15.99■□□□□ 0.15
SRGAP2C-204ENST00000613462 COL13A1Q5TAT6 717 aaPredicted RBP15.99■□□□□ 0.15
SRGAP2C-204ENST00000613462 VPS37DQ86XT2 251 aa15.99■□□□□ 0.15
SRGAP2C-204ENST00000613462 DBNDD1Q9H9R9 158 aa15.99■□□□□ 0.15
SRGAP2C-204ENST00000613462 A0A1B0GUL7 405 aa15.98■□□□□ 0.15
SRGAP2C-204ENST00000613462 WTIPA6NIX2 430 aaPredicted RBP15.98■□□□□ 0.15
SRGAP2C-204ENST00000613462 SNAP23O00161 211 aa15.98■□□□□ 0.15
SRGAP2C-204ENST00000613462 KLRK1P26718 216 aa15.98■□□□□ 0.15
SRGAP2C-204ENST00000613462 HIBADHP31937 336 aaKnown RBP15.98■□□□□ 0.15
SRGAP2C-204ENST00000613462 DPY19L2Q6NUT2 758 aa15.98■□□□□ 0.15
SRGAP2C-204ENST00000613462 TXNRD3Q86VQ6 643 aa15.98■□□□□ 0.15
SRGAP2C-204ENST00000613462 RHPN1Q8TCX5 695 aa15.98■□□□□ 0.15
SRGAP2C-204ENST00000613462 GCC1Q96CN9 775 aa15.98■□□□□ 0.15
SRGAP2C-204ENST00000613462 TOMM70O94826 608 aa15.97■□□□□ 0.15
SRGAP2C-204ENST00000613462 IL1R1P14778 569 aa15.97■□□□□ 0.15
SRGAP2C-204ENST00000613462 TNIP1Q15025 636 aa15.97■□□□□ 0.15
SRGAP2C-204ENST00000613462 DOK7Q18PE1 504 aa15.97■□□□□ 0.15
SRGAP2C-204ENST00000613462 LRRCC1Q9C099 1032 aa15.97■□□□□ 0.15
SRGAP2C-204ENST00000613462 GNL3LQ9NVN8 582 aaKnown RBP15.97■□□□□ 0.15
SRGAP2C-204ENST00000613462 KDM2BQ8NHM5 1336 aa15.96■□□□□ 0.15
SRGAP2C-204ENST00000613462 ZBTB22O15209 634 aa15.96■□□□□ 0.15
SRGAP2C-204ENST00000613462 TNNI3KQ59H18 835 aa15.96■□□□□ 0.15
SRGAP2C-204ENST00000613462 FBXO33Q7Z6M2 555 aa15.96■□□□□ 0.15
SRGAP2C-204ENST00000613462 GPC2Q8N158 579 aa15.96■□□□□ 0.15
SRGAP2C-204ENST00000613462 CLASRPQ8N2M8 674 aaKnown RBP15.96■□□□□ 0.15
SRGAP2C-204ENST00000613462 JMYQ8N9B5 988 aa15.96■□□□□ 0.15
SRGAP2C-204ENST00000613462 FAM84BQ96KN1 310 aaPredicted RBP15.96■□□□□ 0.15
SRGAP2C-204ENST00000613462 CD209Q9NNX6 404 aa15.96■□□□□ 0.15
SRGAP2C-204ENST00000613462 FPGT-TNNI3KV9GXZ4 949 aa15.96■□□□□ 0.15
SRGAP2C-204ENST00000613462 AKAP11Q9UKA4 1901 aa15.96■□□□□ 0.14
SRGAP2C-204ENST00000613462 GLTPD2A6NH11 291 aa15.95■□□□□ 0.14
SRGAP2C-204ENST00000613462 YDJCA8MPS7 323 aa15.95■□□□□ 0.14
SRGAP2C-204ENST00000613462 GYG1P46976 350 aa15.95■□□□□ 0.14
SRGAP2C-204ENST00000613462 ERICH6BQ5W0A0 696 aa15.95■□□□□ 0.14
SRGAP2C-204ENST00000613462 CIAPIN1Q6FI81 312 aa15.95■□□□□ 0.14
SRGAP2C-204ENST00000613462 XAGE2Q96GT9 111 aa15.95■□□□□ 0.14
SRGAP2C-204ENST00000613462 NEUROD6Q96NK8 337 aa15.95■□□□□ 0.14
SRGAP2C-204ENST00000613462 ZBTB47Q9UFB7 747 aaPredicted RBP15.95■□□□□ 0.14
SRGAP2C-204ENST00000613462 ZNF541Q9H0D2 1346 aa15.94■□□□□ 0.14
SRGAP2C-204ENST00000613462 SEMA3EO15041 775 aa15.94■□□□□ 0.14
SRGAP2C-204ENST00000613462 TIMM10P62072 90 aa15.94■□□□□ 0.14
SRGAP2C-204ENST00000613462 HTRA3P83110 453 aa15.94■□□□□ 0.14
SRGAP2C-204ENST00000613462 CXCL9Q07325 125 aa15.94■□□□□ 0.14
SRGAP2C-204ENST00000613462 GORABQ5T7V8 394 aa15.94■□□□□ 0.14
SRGAP2C-204ENST00000613462 TDRD7Q8NHU6 1098 aaKnown RBP15.94■□□□□ 0.14
SRGAP2C-204ENST00000613462 GTF3C3Q9Y5Q9 886 aa15.94■□□□□ 0.14
SRGAP2C-204ENST00000613462 MYO3BQ8WXR4 1341 aa15.94■□□□□ 0.14
SRGAP2C-204ENST00000613462 USP17L3A6NCW0 530 aa15.93■□□□□ 0.14
SRGAP2C-204ENST00000613462 USP17L4A6NCW7 530 aa15.93■□□□□ 0.14
SRGAP2C-204ENST00000613462 APBB1O00213 710 aa15.93■□□□□ 0.14
SRGAP2C-204ENST00000613462 RPS12P25398 132 aaKnown RBP15.93■□□□□ 0.14
SRGAP2C-204ENST00000613462 STRIP1Q5VSL9 837 aa15.93■□□□□ 0.14
SRGAP2C-204ENST00000613462 USP17L1Q7RTZ2 530 aa15.93■□□□□ 0.14
SRGAP2C-204ENST00000613462 AACSQ86V21 672 aa15.93■□□□□ 0.14
SRGAP2C-204ENST00000613462 NMRK2Q9NPI5 230 aa15.93■□□□□ 0.14
SRGAP2C-204ENST00000613462 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.93■□□□□ 0.14
SRGAP2C-204ENST00000613462 PDS5AQ29RF7 1337 aaKnown RBP15.93■□□□□ 0.14
SRGAP2C-204ENST00000613462 FRAT2O75474 233 aaPredicted RBP15.92■□□□□ 0.14
SRGAP2C-204ENST00000613462 RAD17O75943 681 aa15.92■□□□□ 0.14
SRGAP2C-204ENST00000613462 IFIT2P09913 472 aaKnown RBP15.92■□□□□ 0.14
SRGAP2C-204ENST00000613462 UQCRFS1P1P0C7P4 283 aa15.92■□□□□ 0.14
SRGAP2C-204ENST00000613462 ADORA1P30542 326 aa15.92■□□□□ 0.14
SRGAP2C-204ENST00000613462 BCAMP50895 628 aa15.92■□□□□ 0.14
SRGAP2C-204ENST00000613462 CCDC158Q5M9N0 1113 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms