RNA–Protein interactions for RNA: ENST00000613296.4

ALMS1-206, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,925 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-206ENST00000613296 SLF2Q8IX21 1173 aa9.43□□□□□ -0.9
ALMS1-206ENST00000613296 CSRNP2Q9H175 543 aa9.43□□□□□ -0.9
ALMS1-206ENST00000613296 Q9H521 79 aa9.43□□□□□ -0.9
ALMS1-206ENST00000613296 GUCY1B3Q02153 619 aa9.43□□□□□ -0.9
ALMS1-206ENST00000613296 SDCCAG3Q96C92 435 aa9.43□□□□□ -0.9
ALMS1-206ENST00000613296 HNRNPCL2B2RXH8 293 aa9.43□□□□□ -0.9
ALMS1-206ENST00000613296 HNRNPCL1O60812 293 aaKnown RBP9.43□□□□□ -0.9
ALMS1-206ENST00000613296 ATXN8OSP0DMR3 200 aa9.43□□□□□ -0.9
ALMS1-206ENST00000613296 SESN3P58005 492 aa9.43□□□□□ -0.9
ALMS1-206ENST00000613296 ZRANB2O95218 330 aaKnown RBP eCLIP9.43□□□□□ -0.9
ALMS1-206ENST00000613296 KRT83P78385 493 aa9.43□□□□□ -0.9
ALMS1-206ENST00000613296 LRRC23Q53EV4 343 aaPredicted RBP9.43□□□□□ -0.9
ALMS1-206ENST00000613296 ZNF530Q6P9A1 599 aaPredicted RBP9.43□□□□□ -0.9
ALMS1-206ENST00000613296 ISM2Q6H9L7 571 aa9.43□□□□□ -0.9
ALMS1-206ENST00000613296 MICU3Q86XE3 530 aa9.43□□□□□ -0.9
ALMS1-206ENST00000613296 PDE3AQ14432 1141 aa9.43□□□□□ -0.9
ALMS1-206ENST00000613296 SCHIP1Q9P0W5 487 aaPredicted RBP9.43□□□□□ -0.9
ALMS1-206ENST00000613296 BCAP29Q9UHQ4 241 aa9.43□□□□□ -0.9
ALMS1-206ENST00000613296 KRT3P12035 628 aa9.43□□□□□ -0.9
ALMS1-206ENST00000613296 ATP2B3Q16720 1220 aa9.43□□□□□ -0.9
ALMS1-206ENST00000613296 AGTPBP1Q9UPW5 1226 aa9.43□□□□□ -0.9
ALMS1-206ENST00000613296 POLA1P09884 1462 aaPredicted RBP9.43□□□□□ -0.9
ALMS1-206ENST00000613296 TOM1L2Q6ZVM7 507 aa9.43□□□□□ -0.9
ALMS1-206ENST00000613296 MRRFQ96E11 262 aaKnown RBP9.43□□□□□ -0.9
ALMS1-206ENST00000613296 IRX4P78413 519 aa9.42□□□□□ -0.9
ALMS1-206ENST00000613296 UBXN1Q04323 297 aa9.42□□□□□ -0.9
ALMS1-206ENST00000613296 MAP3K12Q12852 859 aa9.42□□□□□ -0.9
ALMS1-206ENST00000613296 ASIC1P78348 528 aa9.42□□□□□ -0.9
ALMS1-206ENST00000613296 DBN1Q16643 649 aa9.42□□□□□ -0.9
ALMS1-206ENST00000613296 ZBTB41Q5SVQ8 909 aa9.42□□□□□ -0.9
ALMS1-206ENST00000613296 MICAL1Q8TDZ2 1067 aa9.42□□□□□ -0.9
ALMS1-206ENST00000613296 PLCB4Q15147 1175 aa9.42□□□□□ -0.9
ALMS1-206ENST00000613296 NBPF8Q3BBV2 869 aa9.42□□□□□ -0.9
ALMS1-206ENST00000613296 HSP90AA4PQ58FG1 418 aa9.42□□□□□ -0.9
ALMS1-206ENST00000613296 LUC7L3O95232 432 aaKnown RBP9.42□□□□□ -0.9
ALMS1-206ENST00000613296 GNL1P36915 607 aaPredicted RBP9.42□□□□□ -0.9
ALMS1-206ENST00000613296 EXOSC9Q06265 439 aaKnown RBP9.42□□□□□ -0.9
ALMS1-206ENST00000613296 NCBP1Q09161 790 aaKnown RBP9.42□□□□□ -0.9
ALMS1-206ENST00000613296 KANK4Q5T7N3 995 aaPredicted RBP9.42□□□□□ -0.9
ALMS1-206ENST00000613296 NUTM1Q86Y26 1132 aa9.42□□□□□ -0.9
ALMS1-206ENST00000613296 TATP17735 454 aaPredicted RBP9.42□□□□□ -0.9
ALMS1-206ENST00000613296 HDAC9Q9UKV0 1011 aa9.42□□□□□ -0.9
ALMS1-206ENST00000613296 ORC6Q9Y5N6 252 aa9.42□□□□□ -0.9
ALMS1-206ENST00000613296 SYKP43405 635 aa9.42□□□□□ -0.9
ALMS1-206ENST00000613296 SPAG1Q07617 926 aa9.42□□□□□ -0.9
ALMS1-206ENST00000613296 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.42□□□□□ -0.9
ALMS1-206ENST00000613296 FAM204AQ9H8W3 233 aa9.41□□□□□ -0.9
ALMS1-206ENST00000613296 ZNF444Q8N0Y2 327 aaPredicted RBP9.41□□□□□ -0.9
ALMS1-206ENST00000613296 GGNBP2Q9H3C7 697 aa9.41□□□□□ -0.9
ALMS1-206ENST00000613296 CCDC122Q5T0U0 273 aa9.41□□□□□ -0.9
ALMS1-206ENST00000613296 DHX57Q6P158 1386 aaKnown RBP9.41□□□□□ -0.9
ALMS1-206ENST00000613296 UBE2HP62256 183 aa9.41□□□□□ -0.9
ALMS1-206ENST00000613296 PPP2R5CQ13362 524 aa9.41□□□□□ -0.9
ALMS1-206ENST00000613296 ACTN4O43707 911 aaKnown RBP9.41□□□□□ -0.9
ALMS1-206ENST00000613296 CCT2P78371 535 aaKnown RBP9.41□□□□□ -0.9
ALMS1-206ENST00000613296 STAC3Q96MF2 364 aa9.41□□□□□ -0.9
ALMS1-206ENST00000613296 UTP11Q9Y3A2 253 aaKnown RBP9.41□□□□□ -0.9
ALMS1-206ENST00000613296 IFIT3O14879 490 aaKnown RBP9.41□□□□□ -0.9
ALMS1-206ENST00000613296 TUBB4AP04350 444 aa9.41□□□□□ -0.9
ALMS1-206ENST00000613296 LIMCH1Q9UPQ0 1083 aa9.41□□□□□ -0.9
ALMS1-206ENST00000613296 ARHGAP42A6NI28 874 aa9.41□□□□□ -0.9
ALMS1-206ENST00000613296 PDE4BQ07343 736 aa9.41□□□□□ -0.9
ALMS1-206ENST00000613296 PHLDB3Q6NSJ2 640 aa9.41□□□□□ -0.9
ALMS1-206ENST00000613296 PEX19P40855 299 aa9.41□□□□□ -0.9
ALMS1-206ENST00000613296 CCDC42Q96M95 316 aa9.41□□□□□ -0.9
ALMS1-206ENST00000613296 ANLNQ9NQW6 1124 aa9.41□□□□□ -0.9
ALMS1-206ENST00000613296 THEGQ9P2T0 379 aa9.41□□□□□ -0.9
ALMS1-206ENST00000613296 GJB2P29033 226 aa9.41□□□□□ -0.9
ALMS1-206ENST00000613296 NEK11Q8NG66 645 aa9.41□□□□□ -0.9
ALMS1-206ENST00000613296 TNPO1Q92973 898 aaKnown RBP9.41□□□□□ -0.9
ALMS1-206ENST00000613296 IL1RAPL2Q9NP60 686 aa9.41□□□□□ -0.9
ALMS1-206ENST00000613296 GOLGA6CA6NDK9 693 aa9.4□□□□□ -0.9
ALMS1-206ENST00000613296 GOLGA6DP0CG33 693 aa9.4□□□□□ -0.9
ALMS1-206ENST00000613296 HCLS1P14317 486 aaPredicted RBP9.4□□□□□ -0.9
ALMS1-206ENST00000613296 AFMP43652 599 aa9.4□□□□□ -0.9
ALMS1-206ENST00000613296 JADE1Q6IE81 842 aa9.4□□□□□ -0.9
ALMS1-206ENST00000613296 FNBP4Q8N3X1 1017 aaPredicted RBP9.4□□□□□ -0.9
ALMS1-206ENST00000613296 GOLGA6AQ9NYA3 693 aa9.4□□□□□ -0.9
ALMS1-206ENST00000613296 BAG5Q9UL15 447 aa9.4□□□□□ -0.9
ALMS1-206ENST00000613296 RFX1P22670 979 aa9.4□□□□□ -0.9
ALMS1-206ENST00000613296 VSIG1Q86XK7 387 aa9.4□□□□□ -0.9
ALMS1-206ENST00000613296 MTHFSP49914 203 aa9.4□□□□□ -0.9
ALMS1-206ENST00000613296 SPG7Q9UQ90 795 aa9.4□□□□□ -0.9
ALMS1-206ENST00000613296 PPP2R5DQ14738 602 aa9.4□□□□□ -0.9
ALMS1-206ENST00000613296 UBL4BQ8N7F7 174 aa9.4□□□□□ -0.9
ALMS1-206ENST00000613296 PSMA7O14818 248 aa9.4□□□□□ -0.9
ALMS1-206ENST00000613296 MAFGO15525 162 aa9.4□□□□□ -0.9
ALMS1-206ENST00000613296 CCDC125Q86Z20 511 aa9.4□□□□□ -0.9
ALMS1-206ENST00000613296 SPC25Q9HBM1 224 aa9.4□□□□□ -0.9
ALMS1-206ENST00000613296 ADAMTS8Q9UP79 889 aa9.4□□□□□ -0.9
ALMS1-206ENST00000613296 APOEP02649 317 aa9.4□□□□□ -0.9
ALMS1-206ENST00000613296 SLC5A1P13866 664 aa9.4□□□□□ -0.9
ALMS1-206ENST00000613296 RASEFQ8IZ41 740 aa9.4□□□□□ -0.9
ALMS1-206ENST00000613296 PNISRQ8TF01 805 aaKnown RBP9.4□□□□□ -0.9
ALMS1-206ENST00000613296 MYCBPQ99417 103 aaPredicted RBP9.4□□□□□ -0.9
ALMS1-206ENST00000613296 EIF2AQ9BY44 585 aaKnown RBP9.4□□□□□ -0.9
ALMS1-206ENST00000613296 ZNF652Q9Y2D9 606 aa9.4□□□□□ -0.9
ALMS1-206ENST00000613296 SSFA2P28290 1259 aa9.4□□□□□ -0.9
ALMS1-206ENST00000613296 ANO6Q4KMQ2 910 aa9.4□□□□□ -0.9
ALMS1-206ENST00000613296 ZNF710Q8N1W2 664 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms