RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 ECM29Q5VYK3 1845 aa22.27■■□□□ 1.15
CSNK1E-215ENST00000612795 CDC5LQ99459 802 aaKnown RBP22.26■■□□□ 1.15
CSNK1E-215ENST00000612795 PHAXQ9H814 394 aaKnown RBP22.26■■□□□ 1.15
CSNK1E-215ENST00000612795 MYO3BQ8WXR4 1341 aa22.26■■□□□ 1.15
CSNK1E-215ENST00000612795 LAMB1P07942 1786 aa22.25■■□□□ 1.15
CSNK1E-215ENST00000612795 WDR43Q15061 677 aaKnown RBP eCLIP22.25■■□□□ 1.15
CSNK1E-215ENST00000612795 ARMC9Q7Z3E5 817 aa22.25■■□□□ 1.15
CSNK1E-215ENST00000612795 RBBP6Q7Z6E9 1792 aaKnown RBP22.25■■□□□ 1.15
CSNK1E-215ENST00000612795 WNT10BO00744 389 aa22.24■■□□□ 1.15
CSNK1E-215ENST00000612795 SASH1O94885 1247 aa22.24■■□□□ 1.15
CSNK1E-215ENST00000612795 PRKG1Q13976 671 aa22.24■■□□□ 1.15
CSNK1E-215ENST00000612795 DACT2Q5SW24 774 aa22.24■■□□□ 1.15
CSNK1E-215ENST00000612795 MXD3Q9BW11 206 aa22.24■■□□□ 1.15
CSNK1E-215ENST00000612795 MBIPQ9NS73 344 aa22.24■■□□□ 1.15
CSNK1E-215ENST00000612795 CTSWP56202 376 aa22.22■■□□□ 1.15
CSNK1E-215ENST00000612795 PTPN12Q05209 780 aaKnown RBP22.22■■□□□ 1.15
CSNK1E-215ENST00000612795 APOBEC3FQ8IUX4 373 aaKnown RBP22.22■■□□□ 1.15
CSNK1E-215ENST00000612795 CFHR5Q9BXR6 569 aa22.22■■□□□ 1.15
CSNK1E-215ENST00000612795 DDX58O95786 925 aaKnown RBP22.21■■□□□ 1.15
CSNK1E-215ENST00000612795 STRIP1Q5VSL9 837 aa22.21■■□□□ 1.15
CSNK1E-215ENST00000612795 WTIPA6NIX2 430 aaPredicted RBP22.2■■□□□ 1.14
CSNK1E-215ENST00000612795 ELL2O00472 640 aaPredicted RBP22.2■■□□□ 1.14
CSNK1E-215ENST00000612795 ALDH1A1P00352 501 aa22.2■■□□□ 1.14
CSNK1E-215ENST00000612795 CCT4P50991 539 aaKnown RBP22.2■■□□□ 1.14
CSNK1E-215ENST00000612795 METTL22Q9BUU2 404 aaPredicted RBP22.2■■□□□ 1.14
CSNK1E-215ENST00000612795 COA1Q9GZY4 146 aa22.2■■□□□ 1.14
CSNK1E-215ENST00000612795 R3HDMLQ9H3Y0 253 aa22.2■■□□□ 1.14
CSNK1E-215ENST00000612795 ANGEL1Q9UNK9 670 aaKnown RBP22.2■■□□□ 1.14
CSNK1E-215ENST00000612795 MINPP1Q9UNW1 487 aa22.2■■□□□ 1.14
CSNK1E-215ENST00000612795 MYBBP1AQ9BQG0 1328 aaKnown RBP22.2■■□□□ 1.14
CSNK1E-215ENST00000612795 COL1A1P02452 1464 aaPredicted RBP22.2■■□□□ 1.14
CSNK1E-215ENST00000612795 SPRYD7Q5W111 196 aa22.19■■□□□ 1.14
CSNK1E-215ENST00000612795 BSDC1Q9NW68 430 aaPredicted RBP22.19■■□□□ 1.14
CSNK1E-215ENST00000612795 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.19■■□□□ 1.14
CSNK1E-215ENST00000612795 TRIM17Q9Y577 477 aa22.19■■□□□ 1.14
CSNK1E-215ENST00000612795 MMP14P50281 582 aa22.18■■□□□ 1.14
CSNK1E-215ENST00000612795 KIAA0825Q8IV33 1275 aa22.18■■□□□ 1.14
CSNK1E-215ENST00000612795 MANSC4A6NHS7 340 aaPredicted RBP22.17■■□□□ 1.14
CSNK1E-215ENST00000612795 GREM2Q9H772 168 aa22.17■■□□□ 1.14
CSNK1E-215ENST00000612795 MAP3K2Q9Y2U5 619 aa22.17■■□□□ 1.14
CSNK1E-215ENST00000612795 TTLL5Q6EMB2 1281 aa22.16■■□□□ 1.14
CSNK1E-215ENST00000612795 TTLL11Q8NHH1 800 aa22.16■■□□□ 1.14
CSNK1E-215ENST00000612795 IGHMBP2P38935 993 aaKnown RBP22.15■■□□□ 1.14
CSNK1E-215ENST00000612795 GNAI1P63096 354 aa22.15■■□□□ 1.14
CSNK1E-215ENST00000612795 LDLRAD1Q5T700 205 aa22.15■■□□□ 1.14
CSNK1E-215ENST00000612795 INTS3Q68E01 1043 aaKnown RBP22.15■■□□□ 1.14
CSNK1E-215ENST00000612795 IFT57Q9NWB7 429 aa22.15■■□□□ 1.14
CSNK1E-215ENST00000612795 FZD1Q9UP38 647 aa22.15■■□□□ 1.14
CSNK1E-215ENST00000612795 LEMD3Q9Y2U8 911 aa22.15■■□□□ 1.14
CSNK1E-215ENST00000612795 A0A1B0GUL6 1792 aa22.15■■□□□ 1.14
CSNK1E-215ENST00000612795 KIAA0100Q14667 2235 aaKnown RBP22.14■■□□□ 1.14
CSNK1E-215ENST00000612795 ZNF853P0CG23 659 aa22.14■■□□□ 1.13
CSNK1E-215ENST00000612795 INHBEP58166 350 aa22.14■■□□□ 1.13
CSNK1E-215ENST00000612795 CALD1Q05682 793 aaKnown RBP22.14■■□□□ 1.13
CSNK1E-215ENST00000612795 HABP4Q5JVS0 413 aaKnown RBP22.14■■□□□ 1.13
CSNK1E-215ENST00000612795 OTOP1Q7RTM1 612 aa22.14■■□□□ 1.13
CSNK1E-215ENST00000612795 TXNRD3Q86VQ6 643 aa22.14■■□□□ 1.13
CSNK1E-215ENST00000612795 IFNL1Q8IU54 200 aa22.14■■□□□ 1.13
CSNK1E-215ENST00000612795 SLC10A4Q96EP9 437 aa22.14■■□□□ 1.13
CSNK1E-215ENST00000612795 ADAMTS8Q9UP79 889 aa22.14■■□□□ 1.13
CSNK1E-215ENST00000612795 OTOFQ9HC10 1997 aa22.13■■□□□ 1.13
CSNK1E-215ENST00000612795 POTEFA5A3E0 1075 aa22.13■■□□□ 1.13
CSNK1E-215ENST00000612795 NEXNQ0ZGT2 675 aa22.13■■□□□ 1.13
CSNK1E-215ENST00000612795 CCDC30Q5VVM6 783 aa22.13■■□□□ 1.13
CSNK1E-215ENST00000612795 CHMP4AQ9BY43 222 aa22.13■■□□□ 1.13
CSNK1E-215ENST00000612795 ZNF804BA4D1E1 1349 aa22.12■■□□□ 1.13
CSNK1E-215ENST00000612795 ZBTB48P10074 688 aaPredicted RBP22.12■■□□□ 1.13
CSNK1E-215ENST00000612795 GTF2IP78347 998 aa22.12■■□□□ 1.13
CSNK1E-215ENST00000612795 ERO1AQ96HE7 468 aa22.12■■□□□ 1.13
CSNK1E-215ENST00000612795 DEFB129Q9H1M3 183 aa22.12■■□□□ 1.13
CSNK1E-215ENST00000612795 SSC5DA1L4H1 1573 aa22.12■■□□□ 1.13
CSNK1E-215ENST00000612795 HTTP42858 3142 aa22.11■■□□□ 1.13
CSNK1E-215ENST00000612795 PPP1R12BO60237 982 aaPredicted RBP22.11■■□□□ 1.13
CSNK1E-215ENST00000612795 KLRK1P26718 216 aa22.11■■□□□ 1.13
CSNK1E-215ENST00000612795 KCNJ4P48050 445 aa22.11■■□□□ 1.13
CSNK1E-215ENST00000612795 DLGAP5Q15398 846 aa22.11■■□□□ 1.13
CSNK1E-215ENST00000612795 ZBED3Q96IU2 234 aaPredicted RBP22.11■■□□□ 1.13
CSNK1E-215ENST00000612795 WNK4Q96J92 1243 aa22.11■■□□□ 1.13
CSNK1E-215ENST00000612795 ANKRD2Q9GZV1 360 aa22.11■■□□□ 1.13
CSNK1E-215ENST00000612795 MKI67P46013 3256 aaKnown RBP22.1■■□□□ 1.13
CSNK1E-215ENST00000612795 PI4KAP2A4QPH2 592 aa22.1■■□□□ 1.13
CSNK1E-215ENST00000612795 IGKV5-2P06315 115 aa22.1■■□□□ 1.13
CSNK1E-215ENST00000612795 KSR2Q6VAB6 950 aa22.1■■□□□ 1.13
CSNK1E-215ENST00000612795 PI4KAP1Q8N8J0 262 aa22.1■■□□□ 1.13
CSNK1E-215ENST00000612795 C8orf58Q8NAV2 365 aa22.1■■□□□ 1.13
CSNK1E-215ENST00000612795 CLMNQ96JQ2 1002 aa22.1■■□□□ 1.13
CSNK1E-215ENST00000612795 MPHOSPH8Q99549 860 aa22.1■■□□□ 1.13
CSNK1E-215ENST00000612795 CENPFP49454 3210 aa22.09■■□□□ 1.13
CSNK1E-215ENST00000612795 IGF2BP3O00425 579 aaKnown RBP eCLIP22.09■■□□□ 1.13
CSNK1E-215ENST00000612795 CWF19L2Q2TBE0 894 aaKnown RBP22.09■■□□□ 1.13
CSNK1E-215ENST00000612795 UBE3BQ7Z3V4 1068 aa22.09■■□□□ 1.13
CSNK1E-215ENST00000612795 PPP2R3BQ9Y5P8 575 aa22.09■■□□□ 1.13
CSNK1E-215ENST00000612795 MYO1BO43795 1136 aa22.08■■□□□ 1.13
CSNK1E-215ENST00000612795 MAP3K11Q16584 847 aa22.08■■□□□ 1.13
CSNK1E-215ENST00000612795 OTUD7BQ6GQQ9 843 aa22.08■■□□□ 1.13
CSNK1E-215ENST00000612795 CD99L2Q8TCZ2 262 aa22.08■■□□□ 1.13
CSNK1E-215ENST00000612795 PTPN22Q9Y2R2 807 aa22.08■■□□□ 1.13
CSNK1E-215ENST00000612795 ITGA6P23229 1130 aa22.07■■□□□ 1.12
CSNK1E-215ENST00000612795 NEURL1BA8MQ27 555 aa22.06■■□□□ 1.12
CSNK1E-215ENST00000612795 CRHR2Q13324 411 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms