RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 SALL2Q9Y467 1007 aaPredicted RBP22.71■■□□□ 1.23
SSBP1-215ENST00000612337 ZNF316A6NFI3 1004 aaPredicted RBP22.7■■□□□ 1.22
SSBP1-215ENST00000612337 USP17L8P0C7I0 530 aa22.7■■□□□ 1.22
SSBP1-215ENST00000612337 LINS1Q8NG48 757 aa22.7■■□□□ 1.22
SSBP1-215ENST00000612337 ASTN2O75129 1339 aaPredicted RBP22.7■■□□□ 1.22
SSBP1-215ENST00000612337 ITGA6P23229 1130 aa22.69■■□□□ 1.22
SSBP1-215ENST00000612337 EXOSC9Q06265 439 aaKnown RBP22.69■■□□□ 1.22
SSBP1-215ENST00000612337 SCARF1Q14162 830 aa22.69■■□□□ 1.22
SSBP1-215ENST00000612337 MYOZ2Q9NPC6 264 aa22.69■■□□□ 1.22
SSBP1-215ENST00000612337 TSKSQ9UJT2 592 aa22.69■■□□□ 1.22
SSBP1-215ENST00000612337 LEMD3Q9Y2U8 911 aa22.69■■□□□ 1.22
SSBP1-215ENST00000612337 CSF1RP07333 972 aa22.68■■□□□ 1.22
SSBP1-215ENST00000612337 RGMBQ6NW40 437 aa22.68■■□□□ 1.22
SSBP1-215ENST00000612337 FAM161AQ3B820 660 aa22.67■■□□□ 1.22
SSBP1-215ENST00000612337 ANGEL2Q5VTE6 544 aaKnown RBP22.67■■□□□ 1.22
SSBP1-215ENST00000612337 ZIC5Q96T25 663 aa22.67■■□□□ 1.22
SSBP1-215ENST00000612337 ANKRD2Q9GZV1 360 aa22.67■■□□□ 1.22
SSBP1-215ENST00000612337 PITPNM2Q9BZ72 1349 aa22.66■■□□□ 1.22
SSBP1-215ENST00000612337 FAM155AB1AL88 458 aaPredicted RBP22.66■■□□□ 1.22
SSBP1-215ENST00000612337 DACT2Q5SW24 774 aa22.66■■□□□ 1.22
SSBP1-215ENST00000612337 PIAS4Q8N2W9 510 aaPredicted RBP22.66■■□□□ 1.22
SSBP1-215ENST00000612337 CCDC102AQ96A19 550 aa22.66■■□□□ 1.22
SSBP1-215ENST00000612337 CDCA5Q96FF9 252 aa22.66■■□□□ 1.22
SSBP1-215ENST00000612337 ABHD8Q96I13 439 aa22.66■■□□□ 1.22
SSBP1-215ENST00000612337 MPHOSPH8Q99549 860 aa22.66■■□□□ 1.22
SSBP1-215ENST00000612337 COA1Q9GZY4 146 aa22.66■■□□□ 1.22
SSBP1-215ENST00000612337 ZNF804BA4D1E1 1349 aa22.65■■□□□ 1.22
SSBP1-215ENST00000612337 STRIP1Q5VSL9 837 aa22.65■■□□□ 1.22
SSBP1-215ENST00000612337 TXNRD3Q86VQ6 643 aa22.65■■□□□ 1.22
SSBP1-215ENST00000612337 ZNF646O15015 1829 aaPredicted RBP22.65■■□□□ 1.22
SSBP1-215ENST00000612337 MYO3BQ8WXR4 1341 aa22.64■■□□□ 1.22
SSBP1-215ENST00000612337 ZNF157P51786 506 aaPredicted RBP22.64■■□□□ 1.21
SSBP1-215ENST00000612337 SPINK5Q9NQ38 1064 aaPredicted RBP22.64■■□□□ 1.21
SSBP1-215ENST00000612337 MXD3Q9BW11 206 aa22.63■■□□□ 1.21
SSBP1-215ENST00000612337 ANKRD18BA2A2Z9 1011 aa22.62■■□□□ 1.21
SSBP1-215ENST00000612337 F6X3S4 739 aa22.62■■□□□ 1.21
SSBP1-215ENST00000612337 MMP14P50281 582 aa22.62■■□□□ 1.21
SSBP1-215ENST00000612337 BEND3Q5T5X7 828 aa22.62■■□□□ 1.21
SSBP1-215ENST00000612337 OGFOD1Q8N543 542 aa22.62■■□□□ 1.21
SSBP1-215ENST00000612337 FBXW7Q969H0 707 aa22.62■■□□□ 1.21
SSBP1-215ENST00000612337 CASP8AP2Q9UKL3 1982 aa22.61■■□□□ 1.21
SSBP1-215ENST00000612337 KLRK1P26718 216 aa22.61■■□□□ 1.21
SSBP1-215ENST00000612337 FKBP1BP68106 108 aa22.61■■□□□ 1.21
SSBP1-215ENST00000612337 CHRNDQ07001 517 aa22.61■■□□□ 1.21
SSBP1-215ENST00000612337 NBPF9Q3BBW0 867 aa22.61■■□□□ 1.21
SSBP1-215ENST00000612337 SLC10A3P09131 477 aa22.6■■□□□ 1.21
SSBP1-215ENST00000612337 KCNJ4P48050 445 aa22.6■■□□□ 1.21
SSBP1-215ENST00000612337 FOXO4P98177 505 aa22.6■■□□□ 1.21
SSBP1-215ENST00000612337 KIF23Q02241 960 aaPredicted RBP22.6■■□□□ 1.21
SSBP1-215ENST00000612337 TTLL5Q6EMB2 1281 aa22.6■■□□□ 1.21
SSBP1-215ENST00000612337 PAPPA2Q9BXP8 1791 aa22.59■■□□□ 1.21
SSBP1-215ENST00000612337 WNT10BO00744 389 aa22.59■■□□□ 1.21
SSBP1-215ENST00000612337 IFIT5Q13325 482 aaKnown RBP22.59■■□□□ 1.21
SSBP1-215ENST00000612337 FAM9BQ8IZU0 186 aa22.59■■□□□ 1.21
SSBP1-215ENST00000612337 SAGE1Q9NXZ1 904 aa22.58■■□□□ 1.21
SSBP1-215ENST00000612337 SCAF8Q9UPN6 1271 aaKnown RBP22.57■■□□□ 1.2
SSBP1-215ENST00000612337 CHMP3Q9Y3E7 222 aa22.57■■□□□ 1.2
SSBP1-215ENST00000612337 IRS2Q9Y4H2 1338 aa22.57■■□□□ 1.2
SSBP1-215ENST00000612337 GRM8O00222 908 aa22.56■■□□□ 1.2
SSBP1-215ENST00000612337 GTF2IP78347 998 aa22.56■■□□□ 1.2
SSBP1-215ENST00000612337 C15orf52Q6ZUT6 534 aaKnown RBP22.56■■□□□ 1.2
SSBP1-215ENST00000612337 RASAL3Q86YV0 1011 aa22.56■■□□□ 1.2
SSBP1-215ENST00000612337 CD209Q9NNX6 404 aa22.56■■□□□ 1.2
SSBP1-215ENST00000612337 HDAC9Q9UKV0 1011 aa22.56■■□□□ 1.2
SSBP1-215ENST00000612337 A0A1B0GUL6 1792 aa22.55■■□□□ 1.2
SSBP1-215ENST00000612337 AKAP11Q9UKA4 1901 aa22.55■■□□□ 1.2
SSBP1-215ENST00000612337 TAF5LO75529 589 aa22.55■■□□□ 1.2
SSBP1-215ENST00000612337 LMBR1LQ6UX01 489 aa22.55■■□□□ 1.2
SSBP1-215ENST00000612337 KIAA0825Q8IV33 1275 aa22.55■■□□□ 1.2
SSBP1-215ENST00000612337 REM2Q8IYK8 340 aaPredicted RBP22.55■■□□□ 1.2
SSBP1-215ENST00000612337 CSRNP1Q96S65 589 aa22.55■■□□□ 1.2
SSBP1-215ENST00000612337 MCOLN1Q9GZU1 580 aa22.55■■□□□ 1.2
SSBP1-215ENST00000612337 SNAP23O00161 211 aa22.54■■□□□ 1.2
SSBP1-215ENST00000612337 SASH1O94885 1247 aa22.54■■□□□ 1.2
SSBP1-215ENST00000612337 EPHA10Q5JZY3 1008 aa22.54■■□□□ 1.2
SSBP1-215ENST00000612337 PRAMEF18Q5VWM3 479 aa22.54■■□□□ 1.2
SSBP1-215ENST00000612337 HELBQ8NG08 1087 aaPredicted RBP22.54■■□□□ 1.2
SSBP1-215ENST00000612337 RNF186Q9NXI6 227 aa22.54■■□□□ 1.2
SSBP1-215ENST00000612337 CCDC85CA6NKD9 419 aa22.53■■□□□ 1.2
SSBP1-215ENST00000612337 ALDH1L1O75891 902 aa22.53■■□□□ 1.2
SSBP1-215ENST00000612337 CCDC57Q2TAC2 916 aa22.53■■□□□ 1.2
SSBP1-215ENST00000612337 ZBED3Q96IU2 234 aaPredicted RBP22.53■■□□□ 1.2
SSBP1-215ENST00000612337 C9orf78Q9NZ63 289 aaPredicted RBP22.53■■□□□ 1.2
SSBP1-215ENST00000612337 TRPA1O75762 1119 aa22.52■■□□□ 1.2
SSBP1-215ENST00000612337 MOB2Q70IA6 237 aa22.52■■□□□ 1.2
SSBP1-215ENST00000612337 SRCIN1Q9C0H9 1055 aa22.52■■□□□ 1.2
SSBP1-215ENST00000612337 ZNF521Q96K83 1311 aa22.52■■□□□ 1.2
SSBP1-215ENST00000612337 UBE2Q2LH0YL09 131 aa22.51■■□□□ 1.19
SSBP1-215ENST00000612337 IL1R1P14778 569 aa22.51■■□□□ 1.19
SSBP1-215ENST00000612337 NF2P35240 595 aa22.51■■□□□ 1.19
SSBP1-215ENST00000612337 DGKZQ13574 1117 aa22.51■■□□□ 1.19
SSBP1-215ENST00000612337 LDHAL6AQ6ZMR3 332 aa22.51■■□□□ 1.19
SSBP1-215ENST00000612337 ZNF804AQ7Z570 1209 aa22.51■■□□□ 1.19
SSBP1-215ENST00000612337 APOBEC3FQ8IUX4 373 aaKnown RBP22.51■■□□□ 1.19
SSBP1-215ENST00000612337 TTLL12Q14166 644 aaPredicted RBP22.5■■□□□ 1.19
SSBP1-215ENST00000612337 TAF7LQ5H9L4 462 aa22.5■■□□□ 1.19
SSBP1-215ENST00000612337 SLC4A10Q6U841 1118 aa22.5■■□□□ 1.19
SSBP1-215ENST00000612337 CERS5Q8N5B7 392 aa22.5■■□□□ 1.19
SSBP1-215ENST00000612337 ZNF594Q96JF6 807 aaPredicted RBP22.5■■□□□ 1.19
SSBP1-215ENST00000612337 CNNM1Q9NRU3 951 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms