RNA–Protein interactions for RNA: ENST00000612199.4

SRGAP2B-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRGAP2B, Length 7,120 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-204ENST00000612199 CFAP36Q96G28 342 aa10.8□□□□□ -0.68
SRGAP2B-204ENST00000612199 SLC26A6Q9BXS9 759 aa10.8□□□□□ -0.68
SRGAP2B-204ENST00000612199 STX8Q9UNK0 236 aa10.79□□□□□ -0.68
SRGAP2B-204ENST00000612199 CEP135Q66GS9 1140 aa10.79□□□□□ -0.68
SRGAP2B-204ENST00000612199 LINS1Q8NG48 757 aa10.79□□□□□ -0.68
SRGAP2B-204ENST00000612199 IL2RBP14784 551 aa10.79□□□□□ -0.68
SRGAP2B-204ENST00000612199 UVSSAQ2YD98 709 aa10.79□□□□□ -0.68
SRGAP2B-204ENST00000612199 F8W031 263 aaPredicted RBP10.79□□□□□ -0.68
SRGAP2B-204ENST00000612199 METAP2P50579 478 aaKnown RBP eCLIP10.79□□□□□ -0.68
SRGAP2B-204ENST00000612199 KIF18AQ8NI77 898 aa10.79□□□□□ -0.68
SRGAP2B-204ENST00000612199 KLF18A0A0U1RQI7 1052 aa10.79□□□□□ -0.68
SRGAP2B-204ENST00000612199 CETN2P41208 172 aa10.79□□□□□ -0.68
SRGAP2B-204ENST00000612199 UBE2HP62256 183 aa10.79□□□□□ -0.68
SRGAP2B-204ENST00000612199 EAPPQ56P03 285 aaPredicted RBP10.79□□□□□ -0.68
SRGAP2B-204ENST00000612199 CNNM3Q8NE01 707 aa10.79□□□□□ -0.68
SRGAP2B-204ENST00000612199 NCOA7Q8NI08 942 aa10.79□□□□□ -0.68
SRGAP2B-204ENST00000612199 SNX21Q969T3 373 aa10.79□□□□□ -0.68
SRGAP2B-204ENST00000612199 CCDC194A0A1B0GVG4 234 aa10.79□□□□□ -0.68
SRGAP2B-204ENST00000612199 GPR162Q16538 588 aa10.79□□□□□ -0.68
SRGAP2B-204ENST00000612199 CCDC152Q4G0S7 254 aa10.79□□□□□ -0.68
SRGAP2B-204ENST00000612199 SMC1BQ8NDV3 1235 aa10.79□□□□□ -0.68
SRGAP2B-204ENST00000612199 LRRC45Q96CN5 670 aa10.79□□□□□ -0.68
SRGAP2B-204ENST00000612199 ABCC2Q92887 1545 aa10.78□□□□□ -0.68
SRGAP2B-204ENST00000612199 SLC9C2Q5TAH2 1124 aa10.78□□□□□ -0.68
SRGAP2B-204ENST00000612199 GBP3Q9H0R5 595 aa10.78□□□□□ -0.68
SRGAP2B-204ENST00000612199 MAP3K5Q99683 1374 aa10.78□□□□□ -0.68
SRGAP2B-204ENST00000612199 PPP1R14CQ8TAE6 165 aa10.78□□□□□ -0.68
SRGAP2B-204ENST00000612199 OTUD7AQ8TE49 926 aaPredicted RBP10.78□□□□□ -0.68
SRGAP2B-204ENST00000612199 DCTPP1Q9H773 170 aa10.78□□□□□ -0.68
SRGAP2B-204ENST00000612199 JAKMIP3Q5VZ66 844 aa10.78□□□□□ -0.68
SRGAP2B-204ENST00000612199 JAG2Q9Y219 1238 aa10.78□□□□□ -0.68
SRGAP2B-204ENST00000612199 NMIQ13287 307 aaPredicted RBP10.78□□□□□ -0.68
SRGAP2B-204ENST00000612199 SMC5Q8IY18 1101 aa10.78□□□□□ -0.68
SRGAP2B-204ENST00000612199 RBM46Q8TBY0 533 aaKnown RBP10.78□□□□□ -0.68
SRGAP2B-204ENST00000612199 RAB34Q9BZG1 259 aa10.78□□□□□ -0.68
SRGAP2B-204ENST00000612199 TOP1P11387 765 aaKnown RBP10.78□□□□□ -0.68
SRGAP2B-204ENST00000612199 C4orf50Q6ZRC1 276 aa10.78□□□□□ -0.68
SRGAP2B-204ENST00000612199 MPHOSPH6Q99547 160 aaKnown RBP10.78□□□□□ -0.68
SRGAP2B-204ENST00000612199 LGR6Q9HBX8 967 aa10.78□□□□□ -0.68
SRGAP2B-204ENST00000612199 CLIP2Q9UDT6 1046 aa10.78□□□□□ -0.68
SRGAP2B-204ENST00000612199 CYP7A1P22680 504 aa10.77□□□□□ -0.68
SRGAP2B-204ENST00000612199 KLHDC4Q8TBB5 520 aa10.77□□□□□ -0.68
SRGAP2B-204ENST00000612199 ZSCAN16Q9H4T2 348 aaPredicted RBP10.77□□□□□ -0.68
SRGAP2B-204ENST00000612199 PRKAG2Q9UGJ0 569 aa10.77□□□□□ -0.68
SRGAP2B-204ENST00000612199 GSDMDP57764 484 aa10.77□□□□□ -0.68
SRGAP2B-204ENST00000612199 DZIP3Q86Y13 1208 aaKnown RBP10.77□□□□□ -0.68
SRGAP2B-204ENST00000612199 ZNF397Q8NF99 534 aaPredicted RBP10.77□□□□□ -0.68
SRGAP2B-204ENST00000612199 GJA3Q9Y6H8 435 aa10.77□□□□□ -0.68
SRGAP2B-204ENST00000612199 DNMT1P26358 1616 aaKnown RBP10.77□□□□□ -0.69
SRGAP2B-204ENST00000612199 GIMAP6Q6P9H5 292 aa10.77□□□□□ -0.69
SRGAP2B-204ENST00000612199 SETDB2Q96T68 719 aa10.77□□□□□ -0.69
SRGAP2B-204ENST00000612199 CLSTN2Q9H4D0 955 aa10.77□□□□□ -0.69
SRGAP2B-204ENST00000612199 BICC1Q9H694 974 aaKnown RBP10.77□□□□□ -0.69
SRGAP2B-204ENST00000612199 CCDC160A6NGH7 325 aa10.77□□□□□ -0.69
SRGAP2B-204ENST00000612199 RNMTO43148 476 aaKnown RBP10.77□□□□□ -0.69
SRGAP2B-204ENST00000612199 ZFYP08048 801 aaPredicted RBP10.77□□□□□ -0.69
SRGAP2B-204ENST00000612199 ZNF165P49910 485 aa10.77□□□□□ -0.69
SRGAP2B-204ENST00000612199 IP6K1Q92551 441 aa10.77□□□□□ -0.69
SRGAP2B-204ENST00000612199 SHANK2Q9UPX8 1470 aa10.77□□□□□ -0.69
SRGAP2B-204ENST00000612199 SBNO2Q9Y2G9 1366 aa10.77□□□□□ -0.69
SRGAP2B-204ENST00000612199 GOLGA6L9A6NEM1 432 aa10.77□□□□□ -0.69
SRGAP2B-204ENST00000612199 TFCP2Q12800 502 aa10.77□□□□□ -0.69
SRGAP2B-204ENST00000612199 PLEKHM2Q8IWE5 1019 aa10.77□□□□□ -0.69
SRGAP2B-204ENST00000612199 SRRTQ9BXP5 876 aaKnown RBP10.77□□□□□ -0.69
SRGAP2B-204ENST00000612199 EIF2AK4Q9P2K8 1649 aaKnown RBP10.77□□□□□ -0.69
SRGAP2B-204ENST00000612199 COL17A1Q9UMD9 1497 aaPredicted RBP10.77□□□□□ -0.69
SRGAP2B-204ENST00000612199 IL13P35225 146 aa10.77□□□□□ -0.69
SRGAP2B-204ENST00000612199 TAF4BQ92750 862 aa10.77□□□□□ -0.69
SRGAP2B-204ENST00000612199 PPP1R12BO60237 982 aaPredicted RBP10.76□□□□□ -0.69
SRGAP2B-204ENST00000612199 CHMP6Q96FZ7 201 aa10.76□□□□□ -0.69
SRGAP2B-204ENST00000612199 CNPY2Q9Y2B0 182 aa10.76□□□□□ -0.69
SRGAP2B-204ENST00000612199 UQCRFS1P1P0C7P4 283 aa10.76□□□□□ -0.69
SRGAP2B-204ENST00000612199 MCMDC2Q4G0Z9 681 aa10.76□□□□□ -0.69
SRGAP2B-204ENST00000612199 FAM180AQ6UWF9 173 aa10.76□□□□□ -0.69
SRGAP2B-204ENST00000612199 IL15P40933 162 aaPredicted RBP10.76□□□□□ -0.69
SRGAP2B-204ENST00000612199 SEMA3FQ13275 785 aa10.76□□□□□ -0.69
SRGAP2B-204ENST00000612199 TMCO3Q6UWJ1 677 aa10.76□□□□□ -0.69
SRGAP2B-204ENST00000612199 Q6ZUG5 572 aa10.76□□□□□ -0.69
SRGAP2B-204ENST00000612199 KIAA1328Q86T90 577 aa10.76□□□□□ -0.69
SRGAP2B-204ENST00000612199 PARD3BQ8TEW8 1205 aa10.76□□□□□ -0.69
SRGAP2B-204ENST00000612199 TRMT1Q9NXH9 659 aaKnown RBP10.76□□□□□ -0.69
SRGAP2B-204ENST00000612199 BTG4Q9NY30 223 aa10.76□□□□□ -0.69
SRGAP2B-204ENST00000612199 TRIM35Q9UPQ4 493 aa10.76□□□□□ -0.69
SRGAP2B-204ENST00000612199 SLC4A4Q9Y6R1 1079 aa10.76□□□□□ -0.69
SRGAP2B-204ENST00000612199 HCLS1P14317 486 aaPredicted RBP10.76□□□□□ -0.69
SRGAP2B-204ENST00000612199 CPA1P15085 419 aa10.76□□□□□ -0.69
SRGAP2B-204ENST00000612199 STX1AQ16623 288 aa10.76□□□□□ -0.69
SRGAP2B-204ENST00000612199 GEN1Q17RS7 908 aa10.76□□□□□ -0.69
SRGAP2B-204ENST00000612199 FKBP15Q5T1M5 1219 aa10.76□□□□□ -0.69
SRGAP2B-204ENST00000612199 ANO3Q9BYT9 981 aa10.76□□□□□ -0.69
SRGAP2B-204ENST00000612199 TBX22Q9Y458 520 aa10.76□□□□□ -0.69
SRGAP2B-204ENST00000612199 ZBTB7BO15156 539 aaPredicted RBP10.76□□□□□ -0.69
SRGAP2B-204ENST00000612199 DTNBO60941 627 aa10.76□□□□□ -0.69
SRGAP2B-204ENST00000612199 LDHCP07864 332 aa10.76□□□□□ -0.69
SRGAP2B-204ENST00000612199 ZSCAN22P10073 491 aaPredicted RBP10.76□□□□□ -0.69
SRGAP2B-204ENST00000612199 TSTA3Q13630 321 aaPredicted RBP10.76□□□□□ -0.69
SRGAP2B-204ENST00000612199 CCDC148Q8NFR7 591 aa10.76□□□□□ -0.69
SRGAP2B-204ENST00000612199 FAM89AQ96GI7 184 aa10.76□□□□□ -0.69
SRGAP2B-204ENST00000612199 FERMT1Q9BQL6 677 aa10.76□□□□□ -0.69
SRGAP2B-204ENST00000612199 CDCA7Q9BWT1 371 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms