RNA–Protein interactions for RNA: ENST00000611646.4

RNF38-210, Transcript of ring finger protein 38, humanhuman

TSL 5 BASIC

Gene RNF38, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-210ENST00000611646 B4E1Z4 1266 aa4.37□□□□□ -1.71
RNF38-210ENST00000611646 NR1I2O75469 434 aa4.37□□□□□ -1.71
RNF38-210ENST00000611646 ALDH1L1O75891 902 aa4.37□□□□□ -1.71
RNF38-210ENST00000611646 HSPA4P34932 840 aa4.37□□□□□ -1.71
RNF38-210ENST00000611646 TNNI3KQ59H18 835 aa4.37□□□□□ -1.71
RNF38-210ENST00000611646 RRAGBQ5VZM2 374 aa4.37□□□□□ -1.71
RNF38-210ENST00000611646 CAPZA3Q96KX2 299 aa4.37□□□□□ -1.71
RNF38-210ENST00000611646 FTOQ9C0B1 505 aaKnown RBP eCLIP4.37□□□□□ -1.71
RNF38-210ENST00000611646 PODXL2Q9NZ53 605 aa4.37□□□□□ -1.71
RNF38-210ENST00000611646 STX8Q9UNK0 236 aa4.37□□□□□ -1.71
RNF38-210ENST00000611646 FPGT-TNNI3KV9GXZ4 949 aa4.37□□□□□ -1.71
RNF38-210ENST00000611646 TTC21AQ8NDW8 1320 aa4.37□□□□□ -1.71
RNF38-210ENST00000611646 RAD50Q92878 1312 aa4.37□□□□□ -1.71
RNF38-210ENST00000611646 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.37□□□□□ -1.71
RNF38-210ENST00000611646 N4BP3O15049 544 aa4.37□□□□□ -1.71
RNF38-210ENST00000611646 RNF113AO15541 343 aaKnown RBP4.37□□□□□ -1.71
RNF38-210ENST00000611646 CYP7A1P22680 504 aa4.37□□□□□ -1.71
RNF38-210ENST00000611646 GSDMDP57764 484 aa4.37□□□□□ -1.71
RNF38-210ENST00000611646 WTAPQ15007 396 aa4.37□□□□□ -1.71
RNF38-210ENST00000611646 TDRD12Q587J7 1177 aaKnown RBP4.37□□□□□ -1.71
RNF38-210ENST00000611646 DHX32Q7L7V1 743 aaKnown RBP4.37□□□□□ -1.71
RNF38-210ENST00000611646 CATIPQ7Z7H3 387 aa4.37□□□□□ -1.71
RNF38-210ENST00000611646 IQCA1Q86XH1 822 aa4.37□□□□□ -1.71
RNF38-210ENST00000611646 LEO1Q8WVC0 666 aaPredicted RBP4.37□□□□□ -1.71
RNF38-210ENST00000611646 MMRN2Q9H8L6 949 aa4.37□□□□□ -1.71
RNF38-210ENST00000611646 BCCIPQ9P287 314 aaKnown RBP eCLIP4.37□□□□□ -1.71
RNF38-210ENST00000611646 NRBP1Q9UHY1 535 aa4.37□□□□□ -1.71
RNF38-210ENST00000611646 WWC3Q9ULE0 1092 aa4.37□□□□□ -1.71
RNF38-210ENST00000611646 SAMD9LQ8IVG5 1584 aa4.37□□□□□ -1.71
RNF38-210ENST00000611646 KDM5AP29375 1690 aaKnown RBP4.37□□□□□ -1.71
RNF38-210ENST00000611646 ADGBQ8N7X0 1667 aa4.37□□□□□ -1.71
RNF38-210ENST00000611646 A0A1B0GUL7 405 aa4.37□□□□□ -1.71
RNF38-210ENST00000611646 CCDC194A0A1B0GVG4 234 aa4.37□□□□□ -1.71
RNF38-210ENST00000611646 F8W031 263 aaPredicted RBP4.37□□□□□ -1.71
RNF38-210ENST00000611646 TAF5LO75529 589 aa4.37□□□□□ -1.71
RNF38-210ENST00000611646 PRDM1O75626 825 aa4.37□□□□□ -1.71
RNF38-210ENST00000611646 EIF3JO75822 258 aaKnown RBP4.37□□□□□ -1.71
RNF38-210ENST00000611646 LARGE1O95461 756 aa4.37□□□□□ -1.71
RNF38-210ENST00000611646 RHOXF2BP0C7M4 288 aa4.37□□□□□ -1.71
RNF38-210ENST00000611646 SLFNL1Q499Z3 407 aa4.37□□□□□ -1.71
RNF38-210ENST00000611646 STAMQ92783 540 aa4.37□□□□□ -1.71
RNF38-210ENST00000611646 RHOXF2Q9BQY4 288 aa4.37□□□□□ -1.71
RNF38-210ENST00000611646 CCDC94Q9BW85 323 aaPredicted RBP4.37□□□□□ -1.71
RNF38-210ENST00000611646 FAM107BQ9H098 131 aa4.37□□□□□ -1.71
RNF38-210ENST00000611646 JADE2Q9NQC1 790 aa4.37□□□□□ -1.71
RNF38-210ENST00000611646 PAXBP1Q9Y5B6 917 aa4.37□□□□□ -1.71
RNF38-210ENST00000611646 MYO1BO43795 1136 aa4.36□□□□□ -1.71
RNF38-210ENST00000611646 COBLO75128 1261 aa4.36□□□□□ -1.71
RNF38-210ENST00000611646 CCT6AP40227 531 aaKnown RBP4.36□□□□□ -1.71
RNF38-210ENST00000611646 MTIF2P46199 727 aaKnown RBP4.36□□□□□ -1.71
RNF38-210ENST00000611646 ZNF790Q6PG37 636 aa4.36□□□□□ -1.71
RNF38-210ENST00000611646 CCDC148Q8NFR7 591 aa4.36□□□□□ -1.71
RNF38-210ENST00000611646 ZCRB1Q8TBF4 217 aaKnown RBP4.36□□□□□ -1.71
RNF38-210ENST00000611646 EAF2Q96CJ1 260 aaPredicted RBP4.36□□□□□ -1.71
RNF38-210ENST00000611646 PLCD4Q9BRC7 762 aa4.36□□□□□ -1.71
RNF38-210ENST00000611646 ZMYM3Q14202 1370 aa4.36□□□□□ -1.71
RNF38-210ENST00000611646 FSD2A1L4K1 749 aa4.36□□□□□ -1.71
RNF38-210ENST00000611646 MCM7P33993 719 aa4.36□□□□□ -1.71
RNF38-210ENST00000611646 CTDSPL2Q05D32 466 aa4.36□□□□□ -1.71
RNF38-210ENST00000611646 GOLGA8FQ08AF8 430 aa4.36□□□□□ -1.71
RNF38-210ENST00000611646 GOLGA8DPQ0D2H9 430 aa4.36□□□□□ -1.71
RNF38-210ENST00000611646 ELF2Q15723 593 aa4.36□□□□□ -1.71
RNF38-210ENST00000611646 CACNA2D4Q7Z3S7 1137 aa4.36□□□□□ -1.71
RNF38-210ENST00000611646 CRACR2AQ9BSW2 395 aa4.36□□□□□ -1.71
RNF38-210ENST00000611646 PYCARDQ9ULZ3 195 aa4.36□□□□□ -1.71
RNF38-210ENST00000611646 POGZQ7Z3K3 1410 aa4.36□□□□□ -1.71
RNF38-210ENST00000611646 NPHP3Q7Z494 1330 aa4.36□□□□□ -1.71
RNF38-210ENST00000611646 ABCC2Q92887 1545 aa4.36□□□□□ -1.71
RNF38-210ENST00000611646 LTKP29376 864 aa4.36□□□□□ -1.71
RNF38-210ENST00000611646 ZNF76P36508 570 aa4.36□□□□□ -1.71
RNF38-210ENST00000611646 TERF1P54274 439 aa4.36□□□□□ -1.71
RNF38-210ENST00000611646 EIF4A1P60842 406 aaKnown RBP4.36□□□□□ -1.71
RNF38-210ENST00000611646 ARID5AQ03989 594 aa4.36□□□□□ -1.71
RNF38-210ENST00000611646 SPA17Q15506 151 aa4.36□□□□□ -1.71
RNF38-210ENST00000611646 RTN1Q16799 776 aa4.36□□□□□ -1.71
RNF38-210ENST00000611646 CCDC178Q5BJE1 867 aa4.36□□□□□ -1.71
RNF38-210ENST00000611646 TRMT44Q8IYL2 757 aaKnown RBP4.36□□□□□ -1.71
RNF38-210ENST00000611646 ZNF444Q8N0Y2 327 aaPredicted RBP4.36□□□□□ -1.71
RNF38-210ENST00000611646 KCNG4Q8TDN1 519 aa4.36□□□□□ -1.71
RNF38-210ENST00000611646 CCDC113Q9H0I3 377 aa4.36□□□□□ -1.71
RNF38-210ENST00000611646 RABEP2Q9H5N1 569 aa4.36□□□□□ -1.71
RNF38-210ENST00000611646 CABP5Q9NP86 173 aa4.36□□□□□ -1.71
RNF38-210ENST00000611646 SEC63Q9UGP8 760 aaKnown RBP4.36□□□□□ -1.71
RNF38-210ENST00000611646 EDC4Q6P2E9 1401 aaKnown RBP4.36□□□□□ -1.71
RNF38-210ENST00000611646 CCDC196A0A1B0GTZ2 297 aa4.36□□□□□ -1.71
RNF38-210ENST00000611646 IL15P40933 162 aaPredicted RBP4.36□□□□□ -1.71
RNF38-210ENST00000611646 CCDC96Q2M329 555 aa4.36□□□□□ -1.71
RNF38-210ENST00000611646 DNAJC21Q5F1R6 531 aaKnown RBP4.36□□□□□ -1.71
RNF38-210ENST00000611646 IFIT1BQ5T764 474 aaKnown RBP4.36□□□□□ -1.71
RNF38-210ENST00000611646 HEATR3Q7Z4Q2 680 aa4.36□□□□□ -1.71
RNF38-210ENST00000611646 ZNF496Q96IT1 587 aaPredicted RBP4.36□□□□□ -1.71
RNF38-210ENST00000611646 ARMT1Q9H993 441 aa4.36□□□□□ -1.71
RNF38-210ENST00000611646 KCNJ14Q9UNX9 436 aa4.36□□□□□ -1.71
RNF38-210ENST00000611646 TRPM2O94759 1503 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 GOLGA6L10A6NI86 522 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 KIF2AO00139 706 aaPredicted RBP4.35□□□□□ -1.71
RNF38-210ENST00000611646 PDIA4P13667 645 aaKnown RBP4.35□□□□□ -1.71
RNF38-210ENST00000611646 ZNF75DP51815 510 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 HSPA2P54652 639 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 ZNF174Q15697 407 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms