RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 EYA3Q99504 573 aa10.94□□□□□ -0.66
SNCA-212ENST00000611107 ADARB2Q9NS39 739 aaKnown RBP10.94□□□□□ -0.66
SNCA-212ENST00000611107 MKRN1Q9UHC7 482 aaKnown RBP10.94□□□□□ -0.66
SNCA-212ENST00000611107 PCDHAC2Q9Y5I4 1007 aa10.94□□□□□ -0.66
SNCA-212ENST00000611107 ZNF804BA4D1E1 1349 aa10.93□□□□□ -0.66
SNCA-212ENST00000611107 AOX1Q06278 1338 aa10.93□□□□□ -0.66
SNCA-212ENST00000611107 PLIN1O60240 522 aa10.93□□□□□ -0.66
SNCA-212ENST00000611107 DACT2Q5SW24 774 aa10.93□□□□□ -0.66
SNCA-212ENST00000611107 USP50Q70EL3 339 aaPredicted RBP10.93□□□□□ -0.66
SNCA-212ENST00000611107 PNMA8AQ86V59 439 aaPredicted RBP10.93□□□□□ -0.66
SNCA-212ENST00000611107 CERS5Q8N5B7 392 aa10.93□□□□□ -0.66
SNCA-212ENST00000611107 MEIS3Q99687 375 aa10.93□□□□□ -0.66
SNCA-212ENST00000611107 PGAP2Q9UHJ9 254 aa10.93□□□□□ -0.66
SNCA-212ENST00000611107 RIPOR2Q9Y4F9 1068 aa10.93□□□□□ -0.66
SNCA-212ENST00000611107 RSBN1LQ6PCB5 846 aaPredicted RBP10.92□□□□□ -0.66
SNCA-212ENST00000611107 JMYQ8N9B5 988 aa10.92□□□□□ -0.66
SNCA-212ENST00000611107 DPF2Q92785 391 aa10.92□□□□□ -0.66
SNCA-212ENST00000611107 MPHOSPH8Q99549 860 aa10.92□□□□□ -0.66
SNCA-212ENST00000611107 JAG2Q9Y219 1238 aa10.92□□□□□ -0.66
SNCA-212ENST00000611107 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.92□□□□□ -0.66
SNCA-212ENST00000611107 ADM5C9JUS6 153 aa10.91□□□□□ -0.66
SNCA-212ENST00000611107 TRIM27P14373 513 aa10.91□□□□□ -0.66
SNCA-212ENST00000611107 LDHAL6AQ6ZMR3 332 aa10.91□□□□□ -0.66
SNCA-212ENST00000611107 USP48Q86UV5 1035 aa10.91□□□□□ -0.66
SNCA-212ENST00000611107 VGLL2Q8N8G2 317 aa10.91□□□□□ -0.66
SNCA-212ENST00000611107 CREBZFQ9NS37 354 aa10.91□□□□□ -0.66
SNCA-212ENST00000611107 LEMD3Q9Y2U8 911 aa10.91□□□□□ -0.66
SNCA-212ENST00000611107 ARAP2Q8WZ64 1704 aa10.91□□□□□ -0.66
SNCA-212ENST00000611107 ZNF609O15014 1411 aa10.91□□□□□ -0.66
SNCA-212ENST00000611107 USP17L3A6NCW0 530 aa10.9□□□□□ -0.66
SNCA-212ENST00000611107 USP17L4A6NCW7 530 aa10.9□□□□□ -0.66
SNCA-212ENST00000611107 RLBP1P12271 317 aa10.9□□□□□ -0.66
SNCA-212ENST00000611107 GYG1P46976 350 aa10.9□□□□□ -0.66
SNCA-212ENST00000611107 ZNF280AP59817 542 aaPredicted RBP10.9□□□□□ -0.66
SNCA-212ENST00000611107 GRIK5Q16478 980 aa10.9□□□□□ -0.66
SNCA-212ENST00000611107 CCDC57Q2TAC2 916 aa10.9□□□□□ -0.66
SNCA-212ENST00000611107 C15orf52Q6ZUT6 534 aaKnown RBP10.9□□□□□ -0.66
SNCA-212ENST00000611107 USP17L1Q7RTZ2 530 aa10.9□□□□□ -0.66
SNCA-212ENST00000611107 ARHGAP45Q92619 1136 aa10.9□□□□□ -0.66
SNCA-212ENST00000611107 ANKRD2Q9GZV1 360 aa10.9□□□□□ -0.66
SNCA-212ENST00000611107 CD209Q9NNX6 404 aa10.9□□□□□ -0.66
SNCA-212ENST00000611107 RCAN3Q9UKA8 241 aa10.9□□□□□ -0.66
SNCA-212ENST00000611107 PA2G4Q9UQ80 394 aaKnown RBP10.9□□□□□ -0.66
SNCA-212ENST00000611107 LRRFIP2Q9Y608 721 aaKnown RBP10.9□□□□□ -0.66
SNCA-212ENST00000611107 CNTNAP1P78357 1384 aa10.9□□□□□ -0.67
SNCA-212ENST00000611107 TMEM88BA6NKF7 163 aa10.89□□□□□ -0.67
SNCA-212ENST00000611107 H7C1D1 291 aa10.89□□□□□ -0.67
SNCA-212ENST00000611107 VEGFBP49765 207 aa10.89□□□□□ -0.67
SNCA-212ENST00000611107 GTF2IP78347 998 aa10.89□□□□□ -0.67
SNCA-212ENST00000611107 PTPN12Q05209 780 aaKnown RBP10.89□□□□□ -0.67
SNCA-212ENST00000611107 KIF4BQ2VIQ3 1234 aa10.89□□□□□ -0.67
SNCA-212ENST00000611107 ATF7IPQ6VMQ6 1270 aa10.89□□□□□ -0.67
SNCA-212ENST00000611107 ATG9AQ7Z3C6 839 aa10.89□□□□□ -0.67
SNCA-212ENST00000611107 PODNQ7Z5L7 613 aa10.89□□□□□ -0.67
SNCA-212ENST00000611107 FRAT1Q92837 279 aaPredicted RBP10.89□□□□□ -0.67
SNCA-212ENST00000611107 FBXW7Q969H0 707 aa10.89□□□□□ -0.67
SNCA-212ENST00000611107 CLUAP1Q96AJ1 413 aa10.89□□□□□ -0.67
SNCA-212ENST00000611107 FAM84BQ96KN1 310 aaPredicted RBP10.89□□□□□ -0.67
SNCA-212ENST00000611107 API5Q9BZZ5 524 aaKnown RBP10.89□□□□□ -0.67
SNCA-212ENST00000611107 COA1Q9GZY4 146 aa10.89□□□□□ -0.67
SNCA-212ENST00000611107 CNNM1Q9NRU3 951 aa10.89□□□□□ -0.67
SNCA-212ENST00000611107 G3V3G9 751 aa10.88□□□□□ -0.67
SNCA-212ENST00000611107 RPS12P25398 132 aaKnown RBP10.88□□□□□ -0.67
SNCA-212ENST00000611107 SCARF1Q14162 830 aa10.88□□□□□ -0.67
SNCA-212ENST00000611107 NBPF9Q3BBW0 867 aa10.88□□□□□ -0.67
SNCA-212ENST00000611107 DCAF8Q5TAQ9 597 aa10.88□□□□□ -0.67
SNCA-212ENST00000611107 PRAMEF18Q5VWM3 479 aa10.88□□□□□ -0.67
SNCA-212ENST00000611107 ZKSCAN2Q63HK3 967 aa10.88□□□□□ -0.67
SNCA-212ENST00000611107 INTS3Q68E01 1043 aaKnown RBP10.88□□□□□ -0.67
SNCA-212ENST00000611107 GGA3Q9NZ52 723 aa10.88□□□□□ -0.67
SNCA-212ENST00000611107 IQSEC3Q9UPP2 1182 aaPredicted RBP10.88□□□□□ -0.67
SNCA-212ENST00000611107 SASH1O94885 1247 aa10.87□□□□□ -0.67
SNCA-212ENST00000611107 CELF2O95319 508 aaKnown RBP10.87□□□□□ -0.67
SNCA-212ENST00000611107 IL1R1P14778 569 aa10.87□□□□□ -0.67
SNCA-212ENST00000611107 FGFR2P21802 821 aa10.87□□□□□ -0.67
SNCA-212ENST00000611107 KCNJ4P48050 445 aa10.87□□□□□ -0.67
SNCA-212ENST00000611107 TAF7LQ5H9L4 462 aa10.87□□□□□ -0.67
SNCA-212ENST00000611107 STRIP1Q5VSL9 837 aa10.87□□□□□ -0.67
SNCA-212ENST00000611107 TTLL5Q6EMB2 1281 aa10.87□□□□□ -0.67
SNCA-212ENST00000611107 KIAA0825Q8IV33 1275 aa10.87□□□□□ -0.67
SNCA-212ENST00000611107 TMEM57Q8N5G2 664 aa10.87□□□□□ -0.67
SNCA-212ENST00000611107 AGBL3Q8NEM8 1001 aa10.87□□□□□ -0.67
SNCA-212ENST00000611107 ZBED3Q96IU2 234 aaPredicted RBP10.87□□□□□ -0.67
SNCA-212ENST00000611107 ZIC5Q96T25 663 aa10.87□□□□□ -0.67
SNCA-212ENST00000611107 ZNF408Q9H9D4 720 aa10.87□□□□□ -0.67
SNCA-212ENST00000611107 MYOZ2Q9NPC6 264 aa10.87□□□□□ -0.67
SNCA-212ENST00000611107 COL1A1P02452 1464 aaPredicted RBP10.87□□□□□ -0.67
SNCA-212ENST00000611107 RASSF10A6NK89 507 aa10.86□□□□□ -0.67
SNCA-212ENST00000611107 IPO8O15397 1037 aaKnown RBP10.86□□□□□ -0.67
SNCA-212ENST00000611107 USP17L8P0C7I0 530 aa10.86□□□□□ -0.67
SNCA-212ENST00000611107 UBTFL1P0CB47 393 aaPredicted RBP10.86□□□□□ -0.67
SNCA-212ENST00000611107 ANGEL2Q5VTE6 544 aaKnown RBP10.86□□□□□ -0.67
SNCA-212ENST00000611107 CYP4F22Q6NT55 531 aa10.86□□□□□ -0.67
SNCA-212ENST00000611107 MOB2Q70IA6 237 aa10.86□□□□□ -0.67
SNCA-212ENST00000611107 TDRD7Q8NHU6 1098 aaKnown RBP10.86□□□□□ -0.67
SNCA-212ENST00000611107 ZC3H15Q8WU90 426 aaKnown RBP10.86□□□□□ -0.67
SNCA-212ENST00000611107 SIL1Q9H173 461 aa10.86□□□□□ -0.67
SNCA-212ENST00000611107 THSD7BQ9C0I4 1608 aa10.86□□□□□ -0.67
SNCA-212ENST00000611107 ECM29Q5VYK3 1845 aa10.86□□□□□ -0.67
SNCA-212ENST00000611107 PNMA6EA0A0J9YXQ4 647 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms