RNA–Protein interactions for RNA: ENST00000610485.1

SNX20-205, Transcript of sorting nexin 20, humanhuman

TSL 5 BASIC

Gene SNX20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-205ENST00000610485 VEGFBP49765 207 aa16.27■□□□□ 0.2
SNX20-205ENST00000610485 KIF4BQ2VIQ3 1234 aa16.27■□□□□ 0.2
SNX20-205ENST00000610485 DEFB115Q30KQ5 88 aa16.27■□□□□ 0.2
SNX20-205ENST00000610485 ABT1Q9ULW3 272 aaKnown RBP16.27■□□□□ 0.2
SNX20-205ENST00000610485 KCNJ4P48050 445 aa16.26■□□□□ 0.19
SNX20-205ENST00000610485 RABL6Q3YEC7 729 aaPredicted RBP16.26■□□□□ 0.19
SNX20-205ENST00000610485 DACT2Q5SW24 774 aa16.26■□□□□ 0.19
SNX20-205ENST00000610485 C15orf52Q6ZUT6 534 aaKnown RBP16.26■□□□□ 0.19
SNX20-205ENST00000610485 ZNF594Q96JF6 807 aaPredicted RBP16.26■□□□□ 0.19
SNX20-205ENST00000610485 ZNF646O15015 1829 aaPredicted RBP16.25■□□□□ 0.19
SNX20-205ENST00000610485 TAF5LO75529 589 aa16.25■□□□□ 0.19
SNX20-205ENST00000610485 USP17L8P0C7I0 530 aa16.25■□□□□ 0.19
SNX20-205ENST00000610485 BRPF1P55201 1214 aaPredicted RBP16.25■□□□□ 0.19
SNX20-205ENST00000610485 TAF7LQ5H9L4 462 aa16.25■□□□□ 0.19
SNX20-205ENST00000610485 RBM26Q5T8P6 1007 aaKnown RBP16.25■□□□□ 0.19
SNX20-205ENST00000610485 STRIP1Q5VSL9 837 aa16.25■□□□□ 0.19
SNX20-205ENST00000610485 DIEXFQ68CQ4 756 aaKnown RBP16.25■□□□□ 0.19
SNX20-205ENST00000610485 LDHAL6AQ6ZMR3 332 aa16.25■□□□□ 0.19
SNX20-205ENST00000610485 MIER1Q8N108 512 aa16.25■□□□□ 0.19
SNX20-205ENST00000610485 TLL2Q9Y6L7 1015 aa16.25■□□□□ 0.19
SNX20-205ENST00000610485 A0A1B0GUL6 1792 aa16.25■□□□□ 0.19
SNX20-205ENST00000610485 MYO3BQ8WXR4 1341 aa16.24■□□□□ 0.19
SNX20-205ENST00000610485 SNAP23O00161 211 aa16.24■□□□□ 0.19
SNX20-205ENST00000610485 CELF2O95319 508 aaKnown RBP16.24■□□□□ 0.19
SNX20-205ENST00000610485 USP48Q86UV5 1035 aa16.24■□□□□ 0.19
SNX20-205ENST00000610485 ANKRD44Q8N8A2 993 aa16.24■□□□□ 0.19
SNX20-205ENST00000610485 HELBQ8NG08 1087 aaPredicted RBP16.24■□□□□ 0.19
SNX20-205ENST00000610485 USP44Q9H0E7 712 aa16.24■□□□□ 0.19
SNX20-205ENST00000610485 BICC1Q9H694 974 aaKnown RBP16.24■□□□□ 0.19
SNX20-205ENST00000610485 CNNM1Q9NRU3 951 aa16.24■□□□□ 0.19
SNX20-205ENST00000610485 KRT26Q7Z3Y9 468 aa16.23■□□□□ 0.19
SNX20-205ENST00000610485 DCPSQ96C86 337 aaKnown RBP16.23■□□□□ 0.19
SNX20-205ENST00000610485 MXD3Q9BW11 206 aa16.23■□□□□ 0.19
SNX20-205ENST00000610485 CD209Q9NNX6 404 aa16.23■□□□□ 0.19
SNX20-205ENST00000610485 MYOZ2Q9NPC6 264 aa16.23■□□□□ 0.19
SNX20-205ENST00000610485 GGA3Q9NZ52 723 aa16.23■□□□□ 0.19
SNX20-205ENST00000610485 THSD7BQ9C0I4 1608 aa16.23■□□□□ 0.19
SNX20-205ENST00000610485 TRPM7Q96QT4 1865 aa16.22■□□□□ 0.19
SNX20-205ENST00000610485 ASTN2O75129 1339 aaPredicted RBP16.22■□□□□ 0.19
SNX20-205ENST00000610485 WDR33Q9C0J8 1336 aaKnown RBP16.22■□□□□ 0.19
SNX20-205ENST00000610485 PCNTO95613 3336 aa16.22■□□□□ 0.19
SNX20-205ENST00000610485 RARSP54136 660 aaKnown RBP16.22■□□□□ 0.19
SNX20-205ENST00000610485 SAPCD2Q86UD0 394 aa16.22■□□□□ 0.19
SNX20-205ENST00000610485 NOB1Q9ULX3 412 aaKnown RBP16.22■□□□□ 0.19
SNX20-205ENST00000610485 ADM5C9JUS6 153 aa16.21■□□□□ 0.19
SNX20-205ENST00000610485 MMP14P50281 582 aa16.21■□□□□ 0.19
SNX20-205ENST00000610485 SCARF1Q14162 830 aa16.21■□□□□ 0.19
SNX20-205ENST00000610485 TTLL5Q6EMB2 1281 aa16.21■□□□□ 0.19
SNX20-205ENST00000610485 DLK2Q6UY11 383 aa16.21■□□□□ 0.19
SNX20-205ENST00000610485 FBXW7Q969H0 707 aa16.21■□□□□ 0.19
SNX20-205ENST00000610485 HHIPL1Q96JK4 782 aa16.21■□□□□ 0.19
SNX20-205ENST00000610485 CAPNS2Q96L46 248 aa16.21■□□□□ 0.19
SNX20-205ENST00000610485 PUS3Q9BZE2 481 aaKnown RBP16.21■□□□□ 0.19
SNX20-205ENST00000610485 API5Q9BZZ5 524 aaKnown RBP16.21■□□□□ 0.19
SNX20-205ENST00000610485 ZNF408Q9H9D4 720 aa16.21■□□□□ 0.19
SNX20-205ENST00000610485 RIPOR2Q9Y4F9 1068 aa16.21■□□□□ 0.19
SNX20-205ENST00000610485 PITPNM2Q9BZ72 1349 aa16.2■□□□□ 0.18
SNX20-205ENST00000610485 IL1R1P14778 569 aa16.2■□□□□ 0.18
SNX20-205ENST00000610485 ECE1P42892 770 aa16.2■□□□□ 0.18
SNX20-205ENST00000610485 GTF2IP78347 998 aa16.2■□□□□ 0.18
SNX20-205ENST00000610485 UBE4AQ14139 1066 aa16.2■□□□□ 0.18
SNX20-205ENST00000610485 ANGEL2Q5VTE6 544 aaKnown RBP16.2■□□□□ 0.18
SNX20-205ENST00000610485 ZNF804AQ7Z570 1209 aa16.2■□□□□ 0.18
SNX20-205ENST00000610485 SULF1Q8IWU6 871 aa16.2■□□□□ 0.18
SNX20-205ENST00000610485 MROH5Q6ZUA9 1318 aa16.19■□□□□ 0.18
SNX20-205ENST00000610485 PLIN1O60240 522 aa16.19■□□□□ 0.18
SNX20-205ENST00000610485 CYP4F22Q6NT55 531 aa16.19■□□□□ 0.18
SNX20-205ENST00000610485 OGFOD1Q8N543 542 aa16.19■□□□□ 0.18
SNX20-205ENST00000610485 WBP1LQ9NX94 342 aa16.19■□□□□ 0.18
SNX20-205ENST00000610485 KIF16BQ96L93 1317 aa16.19■□□□□ 0.18
SNX20-205ENST00000610485 COL13A1Q5TAT6 717 aaPredicted RBP16.18■□□□□ 0.18
SNX20-205ENST00000610485 IFFO2Q5TF58 517 aa16.18■□□□□ 0.18
SNX20-205ENST00000610485 PAXIP1Q6ZW49 1069 aaPredicted RBP16.18■□□□□ 0.18
SNX20-205ENST00000610485 ARHGAP45Q92619 1136 aa16.18■□□□□ 0.18
SNX20-205ENST00000610485 WNT10BO00744 389 aa16.17■□□□□ 0.18
SNX20-205ENST00000610485 FOXN1O15353 648 aa16.17■□□□□ 0.18
SNX20-205ENST00000610485 FKBP1AP62942 108 aaKnown RBP16.17■□□□□ 0.18
SNX20-205ENST00000610485 NBPF9Q3BBW0 867 aa16.17■□□□□ 0.18
SNX20-205ENST00000610485 LRRC24Q50LG9 513 aa16.17■□□□□ 0.18
SNX20-205ENST00000610485 KIAA0825Q8IV33 1275 aa16.17■□□□□ 0.18
SNX20-205ENST00000610485 CERS5Q8N5B7 392 aa16.17■□□□□ 0.18
SNX20-205ENST00000610485 VGLL2Q8N8G2 317 aa16.17■□□□□ 0.18
SNX20-205ENST00000610485 CDCA5Q96FF9 252 aa16.17■□□□□ 0.18
SNX20-205ENST00000610485 HDAC9Q9UKV0 1011 aa16.17■□□□□ 0.18
SNX20-205ENST00000610485 UBTFL1P0CB47 393 aaPredicted RBP16.16■□□□□ 0.18
SNX20-205ENST00000610485 RFX5P48382 616 aaPredicted RBP16.16■□□□□ 0.18
SNX20-205ENST00000610485 MAP2K1Q02750 393 aaPredicted RBP16.16■□□□□ 0.18
SNX20-205ENST00000610485 KLHDC4Q8TBB5 520 aa16.16■□□□□ 0.18
SNX20-205ENST00000610485 AIDAQ96BJ3 306 aa16.16■□□□□ 0.18
SNX20-205ENST00000610485 ZBED3Q96IU2 234 aaPredicted RBP16.16■□□□□ 0.18
SNX20-205ENST00000610485 GBA2Q9HCG7 927 aaPredicted RBP16.16■□□□□ 0.18
SNX20-205ENST00000610485 SASH1O94885 1247 aa16.15■□□□□ 0.18
SNX20-205ENST00000610485 MAP2K2P36507 400 aa16.15■□□□□ 0.18
SNX20-205ENST00000610485 HUNKP57058 714 aa16.15■□□□□ 0.18
SNX20-205ENST00000610485 HNRNPUQ00839 825 aaKnown RBP eCLIP16.15■□□□□ 0.18
SNX20-205ENST00000610485 GRM1Q13255 1194 aa16.15■□□□□ 0.18
SNX20-205ENST00000610485 METTL24Q5JXM2 366 aa16.15■□□□□ 0.18
SNX20-205ENST00000610485 INTS3Q68E01 1043 aaKnown RBP16.15■□□□□ 0.18
SNX20-205ENST00000610485 C2orf69Q8N8R5 385 aa16.15■□□□□ 0.18
SNX20-205ENST00000610485 TDRD7Q8NHU6 1098 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms