RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 ZNF804AQ7Z570 1209 aa16.76■□□□□ 0.27
SENP3-209ENST00000610454 AGBL3Q8NEM8 1001 aa16.76■□□□□ 0.27
SENP3-209ENST00000610454 GNAI3P08754 354 aa16.75■□□□□ 0.27
SENP3-209ENST00000610454 TRIM27P14373 513 aa16.75■□□□□ 0.27
SENP3-209ENST00000610454 INTS3Q68E01 1043 aaKnown RBP16.75■□□□□ 0.27
SENP3-209ENST00000610454 ZC3H15Q8WU90 426 aaKnown RBP16.75■□□□□ 0.27
SENP3-209ENST00000610454 CREBZFQ9NS37 354 aa16.75■□□□□ 0.27
SENP3-209ENST00000610454 MYO3BQ8WXR4 1341 aa16.74■□□□□ 0.27
SENP3-209ENST00000610454 PASKQ96RG2 1323 aa16.74■□□□□ 0.27
SENP3-209ENST00000610454 ZNF609O15014 1411 aa16.74■□□□□ 0.27
SENP3-209ENST00000610454 SHTN1A0MZ66 631 aa16.74■□□□□ 0.27
SENP3-209ENST00000610454 ITGBL1O95965 494 aaPredicted RBP16.74■□□□□ 0.27
SENP3-209ENST00000610454 KLRK1P26718 216 aa16.74■□□□□ 0.27
SENP3-209ENST00000610454 TBC1D10BQ4KMP7 808 aaPredicted RBP16.74■□□□□ 0.27
SENP3-209ENST00000610454 METTL24Q5JXM2 366 aa16.74■□□□□ 0.27
SENP3-209ENST00000610454 RBM26Q5T8P6 1007 aaKnown RBP16.74■□□□□ 0.27
SENP3-209ENST00000610454 SAMD7Q7Z3H4 446 aa16.74■□□□□ 0.27
SENP3-209ENST00000610454 TXNRD3Q86VQ6 643 aa16.74■□□□□ 0.27
SENP3-209ENST00000610454 FTSJ3Q8IY81 847 aaKnown RBP16.74■□□□□ 0.27
SENP3-209ENST00000610454 TRPM4Q8TD43 1214 aa16.74■□□□□ 0.27
SENP3-209ENST00000610454 CLUAP1Q96AJ1 413 aa16.74■□□□□ 0.27
SENP3-209ENST00000610454 TMEM88BA6NKF7 163 aa16.73■□□□□ 0.27
SENP3-209ENST00000610454 SNAP23O00161 211 aa16.73■□□□□ 0.27
SENP3-209ENST00000610454 UBE4AQ14139 1066 aa16.73■□□□□ 0.27
SENP3-209ENST00000610454 KIF4BQ2VIQ3 1234 aa16.73■□□□□ 0.27
SENP3-209ENST00000610454 STRIP1Q5VSL9 837 aa16.73■□□□□ 0.27
SENP3-209ENST00000610454 TTLL5Q6EMB2 1281 aa16.73■□□□□ 0.27
SENP3-209ENST00000610454 C15orf52Q6ZUT6 534 aaKnown RBP16.73■□□□□ 0.27
SENP3-209ENST00000610454 OGFOD1Q8N543 542 aa16.73■□□□□ 0.27
SENP3-209ENST00000610454 KLRG1Q96E93 195 aa16.73■□□□□ 0.27
SENP3-209ENST00000610454 MEIS3Q99687 375 aa16.73■□□□□ 0.27
SENP3-209ENST00000610454 PUS3Q9BZE2 481 aaKnown RBP16.73■□□□□ 0.27
SENP3-209ENST00000610454 CD209Q9NNX6 404 aa16.73■□□□□ 0.27
SENP3-209ENST00000610454 LRRFIP2Q9Y608 721 aaKnown RBP16.73■□□□□ 0.27
SENP3-209ENST00000610454 USP17L8P0C7I0 530 aa16.72■□□□□ 0.27
SENP3-209ENST00000610454 RIPOR2Q9Y4F9 1068 aa16.72■□□□□ 0.27
SENP3-209ENST00000610454 TRPM7Q96QT4 1865 aa16.71■□□□□ 0.27
SENP3-209ENST00000610454 GTF2IP78347 998 aa16.71■□□□□ 0.27
SENP3-209ENST00000610454 LRRC24Q50LG9 513 aa16.71■□□□□ 0.27
SENP3-209ENST00000610454 DACT2Q5SW24 774 aa16.71■□□□□ 0.27
SENP3-209ENST00000610454 VPS37DQ86XT2 251 aa16.71■□□□□ 0.27
SENP3-209ENST00000610454 DNAJC5GQ8N7S2 189 aa16.71■□□□□ 0.27
SENP3-209ENST00000610454 KLHDC4Q8TBB5 520 aa16.71■□□□□ 0.27
SENP3-209ENST00000610454 DCPSQ96C86 337 aaKnown RBP16.71■□□□□ 0.27
SENP3-209ENST00000610454 HIRAP54198 1017 aaPredicted RBP16.7■□□□□ 0.26
SENP3-209ENST00000610454 CDC37L1Q7L3B6 337 aa16.7■□□□□ 0.26
SENP3-209ENST00000610454 PGAP2Q9UHJ9 254 aa16.7■□□□□ 0.26
SENP3-209ENST00000610454 HDAC9Q9UKV0 1011 aa16.7■□□□□ 0.26
SENP3-209ENST00000610454 ABT1Q9ULW3 272 aaKnown RBP16.7■□□□□ 0.26
SENP3-209ENST00000610454 EYA2O00167 538 aa16.69■□□□□ 0.26
SENP3-209ENST00000610454 PDE8BO95263 885 aa16.69■□□□□ 0.26
SENP3-209ENST00000610454 HIBADHP31937 336 aaKnown RBP16.69■□□□□ 0.26
SENP3-209ENST00000610454 ZNF280AP59817 542 aaPredicted RBP16.69■□□□□ 0.26
SENP3-209ENST00000610454 CAVIN4Q5BKX8 364 aa16.69■□□□□ 0.26
SENP3-209ENST00000610454 GMLQ99445 158 aa16.69■□□□□ 0.26
SENP3-209ENST00000610454 GLIS2Q9BZE0 524 aaPredicted RBP16.69■□□□□ 0.26
SENP3-209ENST00000610454 SIL1Q9H173 461 aa16.69■□□□□ 0.26
SENP3-209ENST00000610454 MYOZ2Q9NPC6 264 aa16.69■□□□□ 0.26
SENP3-209ENST00000610454 ZNF646O15015 1829 aaPredicted RBP16.68■□□□□ 0.26
SENP3-209ENST00000610454 TRAF5O00463 557 aa16.68■□□□□ 0.26
SENP3-209ENST00000610454 FRAT2O75474 233 aaPredicted RBP16.68■□□□□ 0.26
SENP3-209ENST00000610454 EGFRP00533 1210 aa16.68■□□□□ 0.26
SENP3-209ENST00000610454 GNAI2P04899 355 aa16.68■□□□□ 0.26
SENP3-209ENST00000610454 IFIT1P09914 478 aaKnown RBP16.68■□□□□ 0.26
SENP3-209ENST00000610454 IL1R1P14778 569 aa16.68■□□□□ 0.26
SENP3-209ENST00000610454 MMP14P50281 582 aa16.68■□□□□ 0.26
SENP3-209ENST00000610454 PTPN12Q05209 780 aaKnown RBP16.68■□□□□ 0.26
SENP3-209ENST00000610454 PUM3Q15397 648 aaKnown RBP16.68■□□□□ 0.26
SENP3-209ENST00000610454 KRT26Q7Z3Y9 468 aa16.68■□□□□ 0.26
SENP3-209ENST00000610454 SULF1Q8IWU6 871 aa16.68■□□□□ 0.26
SENP3-209ENST00000610454 DZIP1LQ8IYY4 767 aaKnown RBP16.68■□□□□ 0.26
SENP3-209ENST00000610454 TMEM57Q8N5G2 664 aa16.68■□□□□ 0.26
SENP3-209ENST00000610454 MXD3Q9BW11 206 aa16.68■□□□□ 0.26
SENP3-209ENST00000610454 ZNF408Q9H9D4 720 aa16.68■□□□□ 0.26
SENP3-209ENST00000610454 MKRN1Q9UHC7 482 aaKnown RBP16.68■□□□□ 0.26
SENP3-209ENST00000610454 FBXO3Q9UK99 471 aa16.68■□□□□ 0.26
SENP3-209ENST00000610454 TNNQ9UQP3 1299 aa16.68■□□□□ 0.26
SENP3-209ENST00000610454 IRS2Q9Y4H2 1338 aa16.68■□□□□ 0.26
SENP3-209ENST00000610454 GYG1P46976 350 aa16.67■□□□□ 0.26
SENP3-209ENST00000610454 RFX5P48382 616 aaPredicted RBP16.67■□□□□ 0.26
SENP3-209ENST00000610454 KIAA0825Q8IV33 1275 aa16.67■□□□□ 0.26
SENP3-209ENST00000610454 ITPRIPQ8IWB1 547 aa16.67■□□□□ 0.26
SENP3-209ENST00000610454 GGA3Q9NZ52 723 aa16.67■□□□□ 0.26
SENP3-209ENST00000610454 POLR2AP24928 1970 aaKnown RBP16.66■□□□□ 0.26
SENP3-209ENST00000610454 SRGAP3O43295 1099 aa16.66■□□□□ 0.26
SENP3-209ENST00000610454 CIAO1O76071 339 aa16.66■□□□□ 0.26
SENP3-209ENST00000610454 CELF2O95319 508 aaKnown RBP16.66■□□□□ 0.26
SENP3-209ENST00000610454 SLC5A1P13866 664 aa16.66■□□□□ 0.26
SENP3-209ENST00000610454 USP48Q86UV5 1035 aa16.66■□□□□ 0.26
SENP3-209ENST00000610454 CEP126Q9P2H0 1117 aa16.66■□□□□ 0.26
SENP3-209ENST00000610454 CNTNAP1P78357 1384 aa16.65■□□□□ 0.26
SENP3-209ENST00000610454 SASH1O94885 1247 aa16.65■□□□□ 0.26
SENP3-209ENST00000610454 MS4A1P11836 297 aa16.65■□□□□ 0.26
SENP3-209ENST00000610454 FMR1Q06787 632 aaKnown RBP eCLIP16.65■□□□□ 0.26
SENP3-209ENST00000610454 SCARF1Q14162 830 aa16.65■□□□□ 0.26
SENP3-209ENST00000610454 PAXIP1Q6ZW49 1069 aaPredicted RBP16.65■□□□□ 0.26
SENP3-209ENST00000610454 VGLL2Q8N8G2 317 aa16.65■□□□□ 0.26
SENP3-209ENST00000610454 FAM84BQ96KN1 310 aaPredicted RBP16.65■□□□□ 0.26
SENP3-209ENST00000610454 JAG2Q9Y219 1238 aa16.65■□□□□ 0.26
SENP3-209ENST00000610454 IL15P40933 162 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms