RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 KCNH5Q8NCM2 988 aa23.85■■□□□ 1.41
SSBP3-216ENST00000610401 CHMP4AQ9BY43 222 aa23.85■■□□□ 1.41
SSBP3-216ENST00000610401 PAG1Q9NWQ8 432 aa23.85■■□□□ 1.41
SSBP3-216ENST00000610401 CGNQ9P2M7 1197 aaKnown RBP23.85■■□□□ 1.41
SSBP3-216ENST00000610401 DENND2AQ9ULE3 1009 aa23.85■■□□□ 1.41
SSBP3-216ENST00000610401 MAPK8IP2Q13387 824 aaPredicted RBP23.85■■□□□ 1.41
SSBP3-216ENST00000610401 HOMER1Q86YM7 354 aa23.85■■□□□ 1.41
SSBP3-216ENST00000610401 SYT10Q6XYQ8 523 aa23.84■■□□□ 1.41
SSBP3-216ENST00000610401 CEP57L1Q8IYX8 460 aa23.83■■□□□ 1.41
SSBP3-216ENST00000610401 ZSCAN16Q9H4T2 348 aaPredicted RBP23.83■■□□□ 1.41
SSBP3-216ENST00000610401 IFIT1P09914 478 aaKnown RBP23.83■■□□□ 1.4
SSBP3-216ENST00000610401 HSPD1P10809 573 aaKnown RBP23.83■■□□□ 1.4
SSBP3-216ENST00000610401 TTLL7Q6ZT98 887 aa23.83■■□□□ 1.4
SSBP3-216ENST00000610401 ARHGEF25Q86VW2 580 aa23.83■■□□□ 1.4
SSBP3-216ENST00000610401 TRERF1Q96PN7 1200 aa23.83■■□□□ 1.4
SSBP3-216ENST00000610401 XPO4Q9C0E2 1151 aaKnown RBP23.83■■□□□ 1.4
SSBP3-216ENST00000610401 CTNNA3Q9UI47 895 aa23.83■■□□□ 1.4
SSBP3-216ENST00000610401 KMT5BQ4FZB7 885 aa23.82■■□□□ 1.4
SSBP3-216ENST00000610401 ILDR1Q86SU0 546 aaPredicted RBP23.82■■□□□ 1.4
SSBP3-216ENST00000610401 NALCNQ8IZF0 1738 aa23.82■■□□□ 1.4
SSBP3-216ENST00000610401 PDIA3P30101 505 aaKnown RBP23.82■■□□□ 1.4
SSBP3-216ENST00000610401 SPECC1Q5M775 1068 aa23.82■■□□□ 1.4
SSBP3-216ENST00000610401 CPLX1O14810 134 aa23.81■■□□□ 1.4
SSBP3-216ENST00000610401 ERCC6LQ2NKX8 1250 aa23.81■■□□□ 1.4
SSBP3-216ENST00000610401 CCDC82Q8N4S0 544 aa23.81■■□□□ 1.4
SSBP3-216ENST00000610401 ANO10Q9NW15 660 aa23.81■■□□□ 1.4
SSBP3-216ENST00000610401 KBTBD3Q8NAB2 608 aa23.81■■□□□ 1.4
SSBP3-216ENST00000610401 ATP1A3P13637 1013 aa23.81■■□□□ 1.4
SSBP3-216ENST00000610401 FAM160A1Q05DH4 1040 aa23.81■■□□□ 1.4
SSBP3-216ENST00000610401 M0R2C6 588 aa23.8■■□□□ 1.4
SSBP3-216ENST00000610401 A1BGP04217 495 aa23.8■■□□□ 1.4
SSBP3-216ENST00000610401 RFX5P48382 616 aaPredicted RBP23.8■■□□□ 1.4
SSBP3-216ENST00000610401 ZBTB22O15209 634 aa23.8■■□□□ 1.4
SSBP3-216ENST00000610401 PFKFB2O60825 505 aa23.8■■□□□ 1.4
SSBP3-216ENST00000610401 HAUS7Q99871 368 aa23.8■■□□□ 1.4
SSBP3-216ENST00000610401 SLC52A2Q9HAB3 445 aa23.8■■□□□ 1.4
SSBP3-216ENST00000610401 KLF18A0A0U1RQI7 1052 aa23.79■■□□□ 1.4
SSBP3-216ENST00000610401 GOLGA8BA8MQT2 603 aa23.79■■□□□ 1.4
SSBP3-216ENST00000610401 APPP05067 770 aa23.79■■□□□ 1.4
SSBP3-216ENST00000610401 ATP2B1P20020 1258 aa23.79■■□□□ 1.4
SSBP3-216ENST00000610401 FBXO38Q6PIJ6 1188 aa23.79■■□□□ 1.4
SSBP3-216ENST00000610401 EPC1Q9H2F5 836 aa23.79■■□□□ 1.4
SSBP3-216ENST00000610401 UBR1Q8IWV7 1749 aa23.79■■□□□ 1.4
SSBP3-216ENST00000610401 RBM43Q6ZSC3 357 aaKnown RBP23.79■■□□□ 1.4
SSBP3-216ENST00000610401 C8orf76Q96K31 380 aa23.79■■□□□ 1.4
SSBP3-216ENST00000610401 ZNF396Q96N95 335 aaPredicted RBP23.79■■□□□ 1.4
SSBP3-216ENST00000610401 RCOR1Q9UKL0 485 aa23.79■■□□□ 1.4
SSBP3-216ENST00000610401 PAXBP1Q9Y5B6 917 aa23.79■■□□□ 1.4
SSBP3-216ENST00000610401 CCZ1BP86790 482 aa23.79■■□□□ 1.4
SSBP3-216ENST00000610401 CCZ1P86791 482 aaPredicted RBP23.79■■□□□ 1.4
SSBP3-216ENST00000610401 GNL2Q13823 731 aaKnown RBP23.79■■□□□ 1.4
SSBP3-216ENST00000610401 COPRSQ9NQ92 184 aa23.79■■□□□ 1.4
SSBP3-216ENST00000610401 UBE2Q2LH0YL09 131 aa23.78■■□□□ 1.4
SSBP3-216ENST00000610401 ADORA1P30542 326 aa23.78■■□□□ 1.4
SSBP3-216ENST00000610401 USPL1Q5W0Q7 1092 aa23.78■■□□□ 1.4
SSBP3-216ENST00000610401 MRPS27Q92552 414 aaKnown RBP23.78■■□□□ 1.4
SSBP3-216ENST00000610401 OSBP2Q969R2 916 aa23.78■■□□□ 1.4
SSBP3-216ENST00000610401 ORC3Q9UBD5 711 aaPredicted RBP23.78■■□□□ 1.4
SSBP3-216ENST00000610401 FDPSP14324 419 aaKnown RBP23.78■■□□□ 1.4
SSBP3-216ENST00000610401 MYL10Q9BUA6 226 aa23.77■■□□□ 1.4
SSBP3-216ENST00000610401 INCENPQ9NQS7 918 aa23.77■■□□□ 1.4
SSBP3-216ENST00000610401 TOPAZ1Q8N9V7 1692 aa23.77■■□□□ 1.4
SSBP3-216ENST00000610401 KRT28Q7Z3Y7 464 aa23.77■■□□□ 1.4
SSBP3-216ENST00000610401 CCAR2Q8N163 923 aaKnown RBP23.77■■□□□ 1.4
SSBP3-216ENST00000610401 A0A1B0GUL7 405 aa23.77■■□□□ 1.39
SSBP3-216ENST00000610401 SYNE3Q6ZMZ3 975 aa23.77■■□□□ 1.39
SSBP3-216ENST00000610401 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.77■■□□□ 1.39
SSBP3-216ENST00000610401 KIF18AQ8NI77 898 aa23.77■■□□□ 1.39
SSBP3-216ENST00000610401 OGFRQ9NZT2 677 aa23.77■■□□□ 1.39
SSBP3-216ENST00000610401 MAST3O60307 1309 aa23.76■■□□□ 1.39
SSBP3-216ENST00000610401 CABP4P57796 275 aa23.76■■□□□ 1.39
SSBP3-216ENST00000610401 PHKBQ93100 1093 aa23.76■■□□□ 1.39
SSBP3-216ENST00000610401 SMARCC2Q8TAQ2 1214 aa23.75■■□□□ 1.39
SSBP3-216ENST00000610401 TATP17735 454 aaPredicted RBP23.75■■□□□ 1.39
SSBP3-216ENST00000610401 NBPF11Q86T75 865 aa23.75■■□□□ 1.39
SSBP3-216ENST00000610401 RGPD2P0DJD1 1756 aa23.75■■□□□ 1.39
SSBP3-216ENST00000610401 KIF28PB7ZC32 967 aa23.75■■□□□ 1.39
SSBP3-216ENST00000610401 SLC3A2P08195 630 aaKnown RBP23.75■■□□□ 1.39
SSBP3-216ENST00000610401 SNRPA1P09661 255 aaKnown RBP23.75■■□□□ 1.39
SSBP3-216ENST00000610401 CLIC6Q96NY7 704 aa23.75■■□□□ 1.39
SSBP3-216ENST00000610401 DNAI1Q9UI46 699 aa23.75■■□□□ 1.39
SSBP3-216ENST00000610401 SYNE4Q8N205 404 aa23.74■■□□□ 1.39
SSBP3-216ENST00000610401 ENGASEQ8NFI3 743 aa23.74■■□□□ 1.39
SSBP3-216ENST00000610401 CARMIL3Q8ND23 1372 aa23.74■■□□□ 1.39
SSBP3-216ENST00000610401 SFPQP23246 707 aaKnown RBP eCLIP23.74■■□□□ 1.39
SSBP3-216ENST00000610401 SCARF1Q14162 830 aa23.74■■□□□ 1.39
SSBP3-216ENST00000610401 PDILTQ8N807 584 aa23.74■■□□□ 1.39
SSBP3-216ENST00000610401 PRC1O43663 620 aa23.73■■□□□ 1.39
SSBP3-216ENST00000610401 TSGA10IPQ3SY00 556 aa23.73■■□□□ 1.39
SSBP3-216ENST00000610401 ARMCX5Q6P1M9 558 aa23.73■■□□□ 1.39
SSBP3-216ENST00000610401 MRFAP1L1Q96HT8 127 aa23.73■■□□□ 1.39
SSBP3-216ENST00000610401 GTPBP4Q9BZE4 634 aaKnown RBP23.73■■□□□ 1.39
SSBP3-216ENST00000610401 SERPINC1P01008 464 aa23.73■■□□□ 1.39
SSBP3-216ENST00000610401 TAF7LQ5H9L4 462 aa23.73■■□□□ 1.39
SSBP3-216ENST00000610401 NKX2-3Q8TAU0 364 aa23.73■■□□□ 1.39
SSBP3-216ENST00000610401 NAT10Q9H0A0 1025 aaKnown RBP23.73■■□□□ 1.39
SSBP3-216ENST00000610401 LRRC37A3O60309 1634 aa23.73■■□□□ 1.39
SSBP3-216ENST00000610401 ZNF202O95125 648 aa23.73■■□□□ 1.39
SSBP3-216ENST00000610401 MICU3Q86XE3 530 aa23.73■■□□□ 1.39
SSBP3-216ENST00000610401 SPTLC2O15270 562 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms