RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 RSBN1LQ6PCB5 846 aaPredicted RBP14.53□□□□□ -0.08
LINC00539-204ENST00000608957 ANKRD44Q8N8A2 993 aa14.53□□□□□ -0.08
LINC00539-204ENST00000608957 MXD3Q9BW11 206 aa14.53□□□□□ -0.08
LINC00539-204ENST00000608957 GLIS2Q9BZE0 524 aaPredicted RBP14.53□□□□□ -0.08
LINC00539-204ENST00000608957 USP44Q9H0E7 712 aa14.53□□□□□ -0.08
LINC00539-204ENST00000608957 BICC1Q9H694 974 aaKnown RBP14.53□□□□□ -0.08
LINC00539-204ENST00000608957 ASTN2O75129 1339 aaPredicted RBP14.52□□□□□ -0.08
LINC00539-204ENST00000608957 G3V3G9 751 aa14.52□□□□□ -0.09
LINC00539-204ENST00000608957 H7C1D1 291 aa14.52□□□□□ -0.09
LINC00539-204ENST00000608957 BRPF1P55201 1214 aaPredicted RBP14.52□□□□□ -0.09
LINC00539-204ENST00000608957 RABL6Q3YEC7 729 aaPredicted RBP14.52□□□□□ -0.09
LINC00539-204ENST00000608957 DCAF8Q5TAQ9 597 aa14.52□□□□□ -0.09
LINC00539-204ENST00000608957 DLK2Q6UY11 383 aa14.52□□□□□ -0.09
LINC00539-204ENST00000608957 PODNQ7Z5L7 613 aa14.52□□□□□ -0.09
LINC00539-204ENST00000608957 PUS3Q9BZE2 481 aaKnown RBP14.52□□□□□ -0.09
LINC00539-204ENST00000608957 ANKRD2Q9GZV1 360 aa14.52□□□□□ -0.09
LINC00539-204ENST00000608957 NOB1Q9ULX3 412 aaKnown RBP14.52□□□□□ -0.09
LINC00539-204ENST00000608957 THSD7BQ9C0I4 1608 aa14.52□□□□□ -0.09
LINC00539-204ENST00000608957 ECM29Q5VYK3 1845 aa14.51□□□□□ -0.09
LINC00539-204ENST00000608957 USP17L3A6NCW0 530 aa14.51□□□□□ -0.09
LINC00539-204ENST00000608957 USP17L4A6NCW7 530 aa14.51□□□□□ -0.09
LINC00539-204ENST00000608957 RARSP54136 660 aaKnown RBP14.51□□□□□ -0.09
LINC00539-204ENST00000608957 IRX6P78412 446 aaPredicted RBP14.51□□□□□ -0.09
LINC00539-204ENST00000608957 USP17L1Q7RTZ2 530 aa14.51□□□□□ -0.09
LINC00539-204ENST00000608957 ZC3H15Q8WU90 426 aaKnown RBP14.51□□□□□ -0.09
LINC00539-204ENST00000608957 PCNTO95613 3336 aa14.51□□□□□ -0.09
LINC00539-204ENST00000608957 ARAP2Q8WZ64 1704 aa14.5□□□□□ -0.09
LINC00539-204ENST00000608957 ZNF280AP59817 542 aaPredicted RBP14.5□□□□□ -0.09
LINC00539-204ENST00000608957 CCDC57Q2TAC2 916 aa14.5□□□□□ -0.09
LINC00539-204ENST00000608957 DACT2Q5SW24 774 aa14.5□□□□□ -0.09
LINC00539-204ENST00000608957 RBM26Q5T8P6 1007 aaKnown RBP14.5□□□□□ -0.09
LINC00539-204ENST00000608957 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.5□□□□□ -0.09
LINC00539-204ENST00000608957 AGBL3Q8NEM8 1001 aa14.5□□□□□ -0.09
LINC00539-204ENST00000608957 COA1Q9GZY4 146 aa14.5□□□□□ -0.09
LINC00539-204ENST00000608957 RASSF10A6NK89 507 aa14.49□□□□□ -0.09
LINC00539-204ENST00000608957 VEGFBP49765 207 aa14.49□□□□□ -0.09
LINC00539-204ENST00000608957 KIF4BQ2VIQ3 1234 aa14.49□□□□□ -0.09
LINC00539-204ENST00000608957 LDHAL6AQ6ZMR3 332 aa14.49□□□□□ -0.09
LINC00539-204ENST00000608957 C15orf52Q6ZUT6 534 aaKnown RBP14.49□□□□□ -0.09
LINC00539-204ENST00000608957 TNNQ9UQP3 1299 aa14.49□□□□□ -0.09
LINC00539-204ENST00000608957 MYH13Q9UKX3 1938 aa14.49□□□□□ -0.09
LINC00539-204ENST00000608957 PLIN1O60240 522 aa14.48□□□□□ -0.09
LINC00539-204ENST00000608957 BCAR3O75815 825 aa14.48□□□□□ -0.09
LINC00539-204ENST00000608957 LRRC24Q50LG9 513 aa14.48□□□□□ -0.09
LINC00539-204ENST00000608957 TAF7LQ5H9L4 462 aa14.48□□□□□ -0.09
LINC00539-204ENST00000608957 USP48Q86UV5 1035 aa14.48□□□□□ -0.09
LINC00539-204ENST00000608957 CD209Q9NNX6 404 aa14.48□□□□□ -0.09
LINC00539-204ENST00000608957 CNNM1Q9NRU3 951 aa14.48□□□□□ -0.09
LINC00539-204ENST00000608957 RIPOR2Q9Y4F9 1068 aa14.48□□□□□ -0.09
LINC00539-204ENST00000608957 ADM5C9JUS6 153 aa14.47□□□□□ -0.09
LINC00539-204ENST00000608957 CELF2O95319 508 aaKnown RBP14.47□□□□□ -0.09
LINC00539-204ENST00000608957 HSPA1AP0DMV8 641 aaKnown RBP14.47□□□□□ -0.09
LINC00539-204ENST00000608957 HSPA1BP0DMV9 641 aaKnown RBP14.47□□□□□ -0.09
LINC00539-204ENST00000608957 KCNJ4P48050 445 aa14.47□□□□□ -0.09
LINC00539-204ENST00000608957 STRIP1Q5VSL9 837 aa14.47□□□□□ -0.09
LINC00539-204ENST00000608957 ERICH6BQ5W0A0 696 aa14.47□□□□□ -0.09
LINC00539-204ENST00000608957 KLHDC4Q8TBB5 520 aa14.47□□□□□ -0.09
LINC00539-204ENST00000608957 FBXW7Q969H0 707 aa14.47□□□□□ -0.09
LINC00539-204ENST00000608957 GGA3Q9NZ52 723 aa14.47□□□□□ -0.09
LINC00539-204ENST00000608957 TLL2Q9Y6L7 1015 aa14.47□□□□□ -0.09
LINC00539-204ENST00000608957 USP17L8P0C7I0 530 aa14.46□□□□□ -0.09
LINC00539-204ENST00000608957 RFX5P48382 616 aaPredicted RBP14.46□□□□□ -0.09
LINC00539-204ENST00000608957 GTF2IP78347 998 aa14.46□□□□□ -0.09
LINC00539-204ENST00000608957 DEFB115Q30KQ5 88 aa14.46□□□□□ -0.09
LINC00539-204ENST00000608957 CDC37L1Q7L3B6 337 aa14.46□□□□□ -0.09
LINC00539-204ENST00000608957 CERS5Q8N5B7 392 aa14.46□□□□□ -0.09
LINC00539-204ENST00000608957 MYOZ2Q9NPC6 264 aa14.46□□□□□ -0.09
LINC00539-204ENST00000608957 ABT1Q9ULW3 272 aaKnown RBP14.46□□□□□ -0.09
LINC00539-204ENST00000608957 IL1R1P14778 569 aa14.45□□□□□ -0.1
LINC00539-204ENST00000608957 SCARF1Q14162 830 aa14.45□□□□□ -0.1
LINC00539-204ENST00000608957 TTLL5Q6EMB2 1281 aa14.45□□□□□ -0.1
LINC00539-204ENST00000608957 KRT26Q7Z3Y9 468 aa14.45□□□□□ -0.1
LINC00539-204ENST00000608957 VGLL2Q8N8G2 317 aa14.45□□□□□ -0.1
LINC00539-204ENST00000608957 API5Q9BZZ5 524 aaKnown RBP14.45□□□□□ -0.1
LINC00539-204ENST00000608957 ZNF408Q9H9D4 720 aa14.45□□□□□ -0.1
LINC00539-204ENST00000608957 KIF16BQ96L93 1317 aa14.44□□□□□ -0.1
LINC00539-204ENST00000608957 CYP4F22Q6NT55 531 aa14.44□□□□□ -0.1
LINC00539-204ENST00000608957 MEIS3Q99687 375 aa14.44□□□□□ -0.1
LINC00539-204ENST00000608957 SCAF8Q9UPN6 1271 aaKnown RBP14.44□□□□□ -0.1
LINC00539-204ENST00000608957 WDR33Q9C0J8 1336 aaKnown RBP14.43□□□□□ -0.1
LINC00539-204ENST00000608957 GYG1P46976 350 aa14.43□□□□□ -0.1
LINC00539-204ENST00000608957 UBE4AQ14139 1066 aa14.43□□□□□ -0.1
LINC00539-204ENST00000608957 NBPF9Q3BBW0 867 aa14.43□□□□□ -0.1
LINC00539-204ENST00000608957 ANGEL2Q5VTE6 544 aaKnown RBP14.43□□□□□ -0.1
LINC00539-204ENST00000608957 SAPCD2Q86UD0 394 aa14.43□□□□□ -0.1
LINC00539-204ENST00000608957 ARHGAP45Q92619 1136 aa14.43□□□□□ -0.1
LINC00539-204ENST00000608957 DCPSQ96C86 337 aaKnown RBP14.43□□□□□ -0.1
LINC00539-204ENST00000608957 FAM84BQ96KN1 310 aaPredicted RBP14.43□□□□□ -0.1
LINC00539-204ENST00000608957 JAG2Q9Y219 1238 aa14.43□□□□□ -0.1
LINC00539-204ENST00000608957 MYO3BQ8WXR4 1341 aa14.42□□□□□ -0.1
LINC00539-204ENST00000608957 UBTFL1P0CB47 393 aaPredicted RBP14.42□□□□□ -0.1
LINC00539-204ENST00000608957 TRIM27P14373 513 aa14.42□□□□□ -0.1
LINC00539-204ENST00000608957 PTPN12Q05209 780 aaKnown RBP14.42□□□□□ -0.1
LINC00539-204ENST00000608957 INTS3Q68E01 1043 aaKnown RBP14.42□□□□□ -0.1
LINC00539-204ENST00000608957 ZNF804AQ7Z570 1209 aa14.42□□□□□ -0.1
LINC00539-204ENST00000608957 KIAA0825Q8IV33 1275 aa14.42□□□□□ -0.1
LINC00539-204ENST00000608957 FRAT1Q92837 279 aaPredicted RBP14.42□□□□□ -0.1
LINC00539-204ENST00000608957 ZBED3Q96IU2 234 aaPredicted RBP14.42□□□□□ -0.1
LINC00539-204ENST00000608957 PCDHAC2Q9Y5I4 1007 aa14.42□□□□□ -0.1
LINC00539-204ENST00000608957 LRRFIP2Q9Y608 721 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms