RNA–Protein interactions for RNA: ENST00000607559.1

TPM2-208, Transcript of tropomyosin 2, human

TSL 2

Gene TPM2, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM2-208	ENST00000607559	AGBL3	Q8NEM8	1001 aa		13.62	□□□□□ -0.23
TPM2-208	ENST00000607559	MED23	Q9ULK4	1368 aa		13.61	□□□□□ -0.23
TPM2-208	ENST00000607559	GRM8	O00222	908 aa		13.61	□□□□□ -0.23
TPM2-208	ENST00000607559	VEGFB	P49765	207 aa		13.61	□□□□□ -0.23
TPM2-208	ENST00000607559	MMP14	P50281	582 aa		13.61	□□□□□ -0.23
TPM2-208	ENST00000607559	CCT4	P50991	539 aa	Known RBP	13.61	□□□□□ -0.23
TPM2-208	ENST00000607559	DOK7	Q18PE1	504 aa		13.61	□□□□□ -0.23
TPM2-208	ENST00000607559	DEFB115	Q30KQ5	88 aa		13.61	□□□□□ -0.23
TPM2-208	ENST00000607559	ALDH1L2	Q3SY69	923 aa		13.61	□□□□□ -0.23
TPM2-208	ENST00000607559	CST9	Q5W186	159 aa		13.61	□□□□□ -0.23
TPM2-208	ENST00000607559	C15orf52	Q6ZUT6	534 aa	Known RBP	13.61	□□□□□ -0.23
TPM2-208	ENST00000607559	AIDA	Q96BJ3	306 aa		13.61	□□□□□ -0.23
TPM2-208	ENST00000607559	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.61	□□□□□ -0.23
TPM2-208	ENST00000607559	BCL2L13	Q9BXK5	485 aa		13.61	□□□□□ -0.23
TPM2-208	ENST00000607559	ANKRD2	Q9GZV1	360 aa		13.61	□□□□□ -0.23
TPM2-208	ENST00000607559	PTPRC	P08575	1304 aa		13.61	□□□□□ -0.23
TPM2-208	ENST00000607559	WTIP	A6NIX2	430 aa	Predicted RBP	13.6	□□□□□ -0.23
TPM2-208	ENST00000607559	IGHMBP2	P38935	993 aa	Known RBP	13.6	□□□□□ -0.23
TPM2-208	ENST00000607559	ZNF280A	P59817	542 aa	Predicted RBP	13.6	□□□□□ -0.23
TPM2-208	ENST00000607559	MICALL2	Q8IY33	904 aa		13.6	□□□□□ -0.23
TPM2-208	ENST00000607559	SPOCK2	Q92563	424 aa		13.6	□□□□□ -0.23
TPM2-208	ENST00000607559	SRCIN1	Q9C0H9	1055 aa		13.6	□□□□□ -0.23
TPM2-208	ENST00000607559	FAM161A	Q3B820	660 aa		13.59	□□□□□ -0.23
TPM2-208	ENST00000607559	DCAF8	Q5TAQ9	597 aa		13.59	□□□□□ -0.23
TPM2-208	ENST00000607559	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.59	□□□□□ -0.23
TPM2-208	ENST00000607559	CDC37L1	Q7L3B6	337 aa		13.59	□□□□□ -0.23
TPM2-208	ENST00000607559	TRPM4	Q8TD43	1214 aa		13.59	□□□□□ -0.23
TPM2-208	ENST00000607559	SSH1	Q8WYL5	1049 aa		13.59	□□□□□ -0.23
TPM2-208	ENST00000607559	KAZALD1	Q96I82	304 aa		13.59	□□□□□ -0.23
TPM2-208	ENST00000607559	HHIPL1	Q96JK4	782 aa		13.59	□□□□□ -0.23
TPM2-208	ENST00000607559	GPR101	Q96P66	508 aa	Predicted RBP	13.59	□□□□□ -0.23
TPM2-208	ENST00000607559	PRDM10	Q9NQV6	1147 aa		13.59	□□□□□ -0.23
TPM2-208	ENST00000607559	ABT1	Q9ULW3	272 aa	Known RBP	13.59	□□□□□ -0.23
TPM2-208	ENST00000607559	IRS2	Q9Y4H2	1338 aa		13.59	□□□□□ -0.23
TPM2-208	ENST00000607559	ANKRD18B	A2A2Z9	1011 aa		13.58	□□□□□ -0.24
TPM2-208	ENST00000607559	USP17L3	A6NCW0	530 aa		13.58	□□□□□ -0.24
TPM2-208	ENST00000607559	USP17L4	A6NCW7	530 aa		13.58	□□□□□ -0.24
TPM2-208	ENST00000607559	CTCF	P49711	727 aa	Predicted RBP	13.58	□□□□□ -0.24
TPM2-208	ENST00000607559	EPHA10	Q5JZY3	1008 aa		13.58	□□□□□ -0.24
TPM2-208	ENST00000607559	USP17L1	Q7RTZ2	530 aa		13.58	□□□□□ -0.24
TPM2-208	ENST00000607559	MPHOSPH8	Q99549	860 aa		13.58	□□□□□ -0.24
TPM2-208	ENST00000607559	COA1	Q9GZY4	146 aa		13.58	□□□□□ -0.24
TPM2-208	ENST00000607559	SHTN1	A0MZ66	631 aa		13.57	□□□□□ -0.24
TPM2-208	ENST00000607559	FOXN1	O15353	648 aa		13.57	□□□□□ -0.24
TPM2-208	ENST00000607559	MAP2K1	Q02750	393 aa	Predicted RBP	13.57	□□□□□ -0.24
TPM2-208	ENST00000607559	CHRND	Q07001	517 aa		13.57	□□□□□ -0.24
TPM2-208	ENST00000607559	IFIT5	Q13325	482 aa	Known RBP	13.57	□□□□□ -0.24
TPM2-208	ENST00000607559	RABL6	Q3YEC7	729 aa	Predicted RBP	13.57	□□□□□ -0.24
TPM2-208	ENST00000607559	STRIP1	Q5VSL9	837 aa		13.57	□□□□□ -0.24
TPM2-208	ENST00000607559	LMBR1L	Q6UX01	489 aa		13.57	□□□□□ -0.24
TPM2-208	ENST00000607559	TXNRD3	Q86VQ6	643 aa		13.57	□□□□□ -0.24
TPM2-208	ENST00000607559	ZNF579	Q8NAF0	562 aa	Known RBP	13.57	□□□□□ -0.24
TPM2-208	ENST00000607559	FAM212A	Q96EL1	285 aa		13.57	□□□□□ -0.24
TPM2-208	ENST00000607559	CDCA7L	Q96GN5	454 aa		13.57	□□□□□ -0.24
TPM2-208	ENST00000607559	PHF12	Q96QT6	1004 aa		13.57	□□□□□ -0.24
TPM2-208	ENST00000607559	WBP1L	Q9NX94	342 aa		13.57	□□□□□ -0.24
TPM2-208	ENST00000607559	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.57	□□□□□ -0.24
TPM2-208	ENST00000607559	TLL2	Q9Y6L7	1015 aa		13.57	□□□□□ -0.24
TPM2-208	ENST00000607559	ZNF804B	A4D1E1	1349 aa		13.57	□□□□□ -0.24
TPM2-208	ENST00000607559	TRAF5	O00463	557 aa		13.56	□□□□□ -0.24
TPM2-208	ENST00000607559	EGFR	P00533	1210 aa		13.56	□□□□□ -0.24
TPM2-208	ENST00000607559	ECE1	P42892	770 aa		13.56	□□□□□ -0.24
TPM2-208	ENST00000607559	FMR1	Q06787	632 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
TPM2-208	ENST00000607559	DACT2	Q5SW24	774 aa		13.56	□□□□□ -0.24
TPM2-208	ENST00000607559	SAMD7	Q7Z3H4	446 aa		13.56	□□□□□ -0.24
TPM2-208	ENST00000607559	WDR33	Q9C0J8	1336 aa	Known RBP	13.56	□□□□□ -0.24
TPM2-208	ENST00000607559	TRPM7	Q96QT4	1865 aa		13.55	□□□□□ -0.24
TPM2-208	ENST00000607559	MYH3	P11055	1940 aa		13.55	□□□□□ -0.24
TPM2-208	ENST00000607559		G3V3G9	751 aa		13.55	□□□□□ -0.24
TPM2-208	ENST00000607559	GABBR2	O75899	941 aa		13.55	□□□□□ -0.24
TPM2-208	ENST00000607559	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.55	□□□□□ -0.24
TPM2-208	ENST00000607559	SAPCD2	Q86UD0	394 aa		13.55	□□□□□ -0.24
TPM2-208	ENST00000607559	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.55	□□□□□ -0.24
TPM2-208	ENST00000607559	USP44	Q9H0E7	712 aa		13.55	□□□□□ -0.24
TPM2-208	ENST00000607559	MYO3B	Q8WXR4	1341 aa		13.55	□□□□□ -0.24
TPM2-208	ENST00000607559	USP17L8	P0C7I0	530 aa		13.54	□□□□□ -0.24
TPM2-208	ENST00000607559	CCDC57	Q2TAC2	916 aa		13.54	□□□□□ -0.24
TPM2-208	ENST00000607559	SLC4A10	Q6U841	1118 aa		13.54	□□□□□ -0.24
TPM2-208	ENST00000607559	SCN9A	Q15858	1988 aa		13.54	□□□□□ -0.24
TPM2-208	ENST00000607559	IL1R1	P14778	569 aa		13.53	□□□□□ -0.24
TPM2-208	ENST00000607559	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.53	□□□□□ -0.24
TPM2-208	ENST00000607559	LDHAL6A	Q6ZMR3	332 aa		13.53	□□□□□ -0.24
TPM2-208	ENST00000607559	SUCLG2	Q96I99	432 aa		13.53	□□□□□ -0.24
TPM2-208	ENST00000607559	CAPNS2	Q96L46	248 aa		13.53	□□□□□ -0.24
TPM2-208	ENST00000607559	RIPOR2	Q9Y4F9	1068 aa		13.53	□□□□□ -0.24
TPM2-208	ENST00000607559	PITPNM2	Q9BZ72	1349 aa		13.53	□□□□□ -0.24
TPM2-208	ENST00000607559	CELF2	O95319	508 aa	Known RBP	13.52	□□□□□ -0.25
TPM2-208	ENST00000607559	MAP2K2	P36507	400 aa		13.52	□□□□□ -0.25
TPM2-208	ENST00000607559	FKBP1A	P62942	108 aa	Known RBP	13.52	□□□□□ -0.25
TPM2-208	ENST00000607559	UBE4A	Q14139	1066 aa		13.52	□□□□□ -0.25
TPM2-208	ENST00000607559	KIF4B	Q2VIQ3	1234 aa		13.52	□□□□□ -0.25
TPM2-208	ENST00000607559	TTLL5	Q6EMB2	1281 aa		13.52	□□□□□ -0.25
TPM2-208	ENST00000607559	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.52	□□□□□ -0.25
TPM2-208	ENST00000607559	KRT26	Q7Z3Y9	468 aa		13.52	□□□□□ -0.25
TPM2-208	ENST00000607559	USP48	Q86UV5	1035 aa		13.52	□□□□□ -0.25
TPM2-208	ENST00000607559	ARHGAP45	Q92619	1136 aa		13.52	□□□□□ -0.25
TPM2-208	ENST00000607559	DCPS	Q96C86	337 aa	Known RBP	13.52	□□□□□ -0.25
TPM2-208	ENST00000607559	ZBED3	Q96IU2	234 aa	Predicted RBP	13.52	□□□□□ -0.25
TPM2-208	ENST00000607559	BEGAIN	Q9BUH8	593 aa		13.52	□□□□□ -0.25
TPM2-208	ENST00000607559	CD209	Q9NNX6	404 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms