RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 LMBR1LQ6UX01 489 aa13.09□□□□□ -0.31
LINC01001-203ENST00000607448 DZIP1LQ8IYY4 767 aaKnown RBP13.09□□□□□ -0.31
LINC01001-203ENST00000607448 TRPM4Q8TD43 1214 aa13.09□□□□□ -0.31
LINC01001-203ENST00000607448 KLRG1Q96E93 195 aa13.09□□□□□ -0.31
LINC01001-203ENST00000607448 ZNF594Q96JF6 807 aaPredicted RBP13.09□□□□□ -0.31
LINC01001-203ENST00000607448 SMC4Q9NTJ3 1288 aa13.09□□□□□ -0.31
LINC01001-203ENST00000607448 C9orf78Q9NZ63 289 aaPredicted RBP13.09□□□□□ -0.31
LINC01001-203ENST00000607448 CHMP3Q9Y3E7 222 aa13.09□□□□□ -0.31
LINC01001-203ENST00000607448 PTPRCP08575 1304 aa13.09□□□□□ -0.31
LINC01001-203ENST00000607448 TNIP1Q15025 636 aa13.08□□□□□ -0.32
LINC01001-203ENST00000607448 ALDH1L2Q3SY69 923 aa13.08□□□□□ -0.32
LINC01001-203ENST00000607448 CNTROBQ8N137 903 aa13.08□□□□□ -0.32
LINC01001-203ENST00000607448 ADARB2Q9NS39 739 aaKnown RBP13.08□□□□□ -0.32
LINC01001-203ENST00000607448 UTYO14607 1347 aa13.08□□□□□ -0.32
LINC01001-203ENST00000607448 MED23Q9ULK4 1368 aa13.08□□□□□ -0.32
LINC01001-203ENST00000607448 ANKRD18BA2A2Z9 1011 aa13.07□□□□□ -0.32
LINC01001-203ENST00000607448 RLBP1P12271 317 aa13.07□□□□□ -0.32
LINC01001-203ENST00000607448 ATP2B4P23634 1241 aa13.07□□□□□ -0.32
LINC01001-203ENST00000607448 CHRNDQ07001 517 aa13.07□□□□□ -0.32
LINC01001-203ENST00000607448 USP50Q70EL3 339 aaPredicted RBP13.07□□□□□ -0.32
LINC01001-203ENST00000607448 MICALL2Q8IY33 904 aa13.07□□□□□ -0.32
LINC01001-203ENST00000607448 FTSJ3Q8IY81 847 aaKnown RBP13.07□□□□□ -0.32
LINC01001-203ENST00000607448 BCL11AQ9H165 835 aa13.07□□□□□ -0.32
LINC01001-203ENST00000607448 CNOT7Q9UIV1 285 aaKnown RBP13.07□□□□□ -0.32
LINC01001-203ENST00000607448 TAF5LO75529 589 aa13.07□□□□□ -0.32
LINC01001-203ENST00000607448 SAMD7Q7Z3H4 446 aa13.07□□□□□ -0.32
LINC01001-203ENST00000607448 HELBQ8NG08 1087 aaPredicted RBP13.07□□□□□ -0.32
LINC01001-203ENST00000607448 MPHOSPH8Q99549 860 aa13.07□□□□□ -0.32
LINC01001-203ENST00000607448 DDX19BQ9UMR2 479 aa13.07□□□□□ -0.32
LINC01001-203ENST00000607448 KIF16BQ96L93 1317 aa13.06□□□□□ -0.32
LINC01001-203ENST00000607448 TRAF5O00463 557 aa13.06□□□□□ -0.32
LINC01001-203ENST00000607448 IPO8O15397 1037 aaKnown RBP13.06□□□□□ -0.32
LINC01001-203ENST00000607448 IFIT5Q13325 482 aaKnown RBP13.06□□□□□ -0.32
LINC01001-203ENST00000607448 BICC1Q9H694 974 aaKnown RBP13.06□□□□□ -0.32
LINC01001-203ENST00000607448 CREBZFQ9NS37 354 aa13.06□□□□□ -0.32
LINC01001-203ENST00000607448 NOB1Q9ULX3 412 aaKnown RBP13.06□□□□□ -0.32
LINC01001-203ENST00000607448 PCDHB15Q9Y5E8 787 aa13.06□□□□□ -0.32
LINC01001-203ENST00000607448 ZNF804BA4D1E1 1349 aa13.06□□□□□ -0.32
LINC01001-203ENST00000607448 IRS2Q9Y4H2 1338 aa13.06□□□□□ -0.32
LINC01001-203ENST00000607448 VIL1P09327 827 aaKnown RBP13.05□□□□□ -0.32
LINC01001-203ENST00000607448 BRPF1P55201 1214 aaPredicted RBP13.05□□□□□ -0.32
LINC01001-203ENST00000607448 DLK2Q6UY11 383 aa13.05□□□□□ -0.32
LINC01001-203ENST00000607448 ANKRD44Q8N8A2 993 aa13.05□□□□□ -0.32
LINC01001-203ENST00000607448 DPF2Q92785 391 aa13.05□□□□□ -0.32
LINC01001-203ENST00000607448 MXD3Q9BW11 206 aa13.05□□□□□ -0.32
LINC01001-203ENST00000607448 USP44Q9H0E7 712 aa13.05□□□□□ -0.32
LINC01001-203ENST00000607448 MKRN1Q9UHC7 482 aaKnown RBP13.05□□□□□ -0.32
LINC01001-203ENST00000607448 G3V3G9 751 aa13.04□□□□□ -0.32
LINC01001-203ENST00000607448 HDAC1Q13547 482 aaPredicted RBP13.04□□□□□ -0.32
LINC01001-203ENST00000607448 TBC1D10BQ4KMP7 808 aaPredicted RBP13.04□□□□□ -0.32
LINC01001-203ENST00000607448 DCAF8Q5TAQ9 597 aa13.04□□□□□ -0.32
LINC01001-203ENST00000607448 ATF7IPQ6VMQ6 1270 aa13.04□□□□□ -0.32
LINC01001-203ENST00000607448 JMYQ8N9B5 988 aa13.04□□□□□ -0.32
LINC01001-203ENST00000607448 GLIS2Q9BZE0 524 aaPredicted RBP13.04□□□□□ -0.32
LINC01001-203ENST00000607448 PUS3Q9BZE2 481 aaKnown RBP13.04□□□□□ -0.32
LINC01001-203ENST00000607448 UPF2Q9HAU5 1272 aaKnown RBP13.04□□□□□ -0.32
LINC01001-203ENST00000607448 LEMD3Q9Y2U8 911 aa13.04□□□□□ -0.32
LINC01001-203ENST00000607448 ZNF609O15014 1411 aa13.04□□□□□ -0.32
LINC01001-203ENST00000607448 TMEM88BA6NKF7 163 aa13.03□□□□□ -0.32
LINC01001-203ENST00000607448 BECN1Q14457 450 aa13.03□□□□□ -0.32
LINC01001-203ENST00000607448 CCDC57Q2TAC2 916 aa13.03□□□□□ -0.32
LINC01001-203ENST00000607448 RBM26Q5T8P6 1007 aaKnown RBP13.03□□□□□ -0.32
LINC01001-203ENST00000607448 CHMP4BQ9H444 224 aaKnown RBP13.03□□□□□ -0.32
LINC01001-203ENST00000607448 TNNQ9UQP3 1299 aa13.03□□□□□ -0.32
LINC01001-203ENST00000607448 ASTN2O75129 1339 aaPredicted RBP13.03□□□□□ -0.32
LINC01001-203ENST00000607448 ARAP2Q8WZ64 1704 aa13.03□□□□□ -0.32
LINC01001-203ENST00000607448 H7C1D1 291 aa13.03□□□□□ -0.32
LINC01001-203ENST00000607448 RPS12P25398 132 aaKnown RBP13.03□□□□□ -0.32
LINC01001-203ENST00000607448 RABL6Q3YEC7 729 aaPredicted RBP13.03□□□□□ -0.32
LINC01001-203ENST00000607448 CST9Q5W186 159 aa13.03□□□□□ -0.32
LINC01001-203ENST00000607448 RSBN1LQ6PCB5 846 aaPredicted RBP13.03□□□□□ -0.32
LINC01001-203ENST00000607448 LDHAL6AQ6ZMR3 332 aa13.03□□□□□ -0.32
LINC01001-203ENST00000607448 PODNQ7Z5L7 613 aa13.03□□□□□ -0.32
LINC01001-203ENST00000607448 KLHDC4Q8TBB5 520 aa13.03□□□□□ -0.32
LINC01001-203ENST00000607448 ANKRD2Q9GZV1 360 aa13.03□□□□□ -0.32
LINC01001-203ENST00000607448 PGAP2Q9UHJ9 254 aa13.03□□□□□ -0.32
LINC01001-203ENST00000607448 ECM29Q5VYK3 1845 aa13.02□□□□□ -0.32
LINC01001-203ENST00000607448 MYH13Q9UKX3 1938 aa13.02□□□□□ -0.33
LINC01001-203ENST00000607448 GMLQ99445 158 aa13.02□□□□□ -0.33
LINC01001-203ENST00000607448 CNTNAP1P78357 1384 aa13.02□□□□□ -0.33
LINC01001-203ENST00000607448 USP17L3A6NCW0 530 aa13.01□□□□□ -0.33
LINC01001-203ENST00000607448 USP17L4A6NCW7 530 aa13.01□□□□□ -0.33
LINC01001-203ENST00000607448 TRIM27P14373 513 aa13.01□□□□□ -0.33
LINC01001-203ENST00000607448 KCNJ4P48050 445 aa13.01□□□□□ -0.33
LINC01001-203ENST00000607448 LRRC24Q50LG9 513 aa13.01□□□□□ -0.33
LINC01001-203ENST00000607448 TAF7LQ5H9L4 462 aa13.01□□□□□ -0.33
LINC01001-203ENST00000607448 DACT2Q5SW24 774 aa13.01□□□□□ -0.33
LINC01001-203ENST00000607448 USP17L1Q7RTZ2 530 aa13.01□□□□□ -0.33
LINC01001-203ENST00000607448 FBXW7Q969H0 707 aa13.01□□□□□ -0.33
LINC01001-203ENST00000607448 COA1Q9GZY4 146 aa13.01□□□□□ -0.33
LINC01001-203ENST00000607448 CNNM1Q9NRU3 951 aa13.01□□□□□ -0.33
LINC01001-203ENST00000607448 THSD7BQ9C0I4 1608 aa13.01□□□□□ -0.33
LINC01001-203ENST00000607448 KIF4BQ2VIQ3 1234 aa13□□□□□ -0.33
LINC01001-203ENST00000607448 AGBL3Q8NEM8 1001 aa13□□□□□ -0.33
LINC01001-203ENST00000607448 ZNF280AP59817 542 aaPredicted RBP12.99□□□□□ -0.33
LINC01001-203ENST00000607448 ZC3H15Q8WU90 426 aaKnown RBP12.99□□□□□ -0.33
LINC01001-203ENST00000607448 CD209Q9NNX6 404 aa12.99□□□□□ -0.33
LINC01001-203ENST00000607448 SCAF8Q9UPN6 1271 aaKnown RBP12.99□□□□□ -0.33
LINC01001-203ENST00000607448 RIPOR2Q9Y4F9 1068 aa12.99□□□□□ -0.33
LINC01001-203ENST00000607448 ADM5C9JUS6 153 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms