RNA–Protein interactions for RNA: ENST00000607272.2

MSH6-212, Transcript of mutS homolog 6, humanhuman

TSL 2

Gene MSH6, Length 2,219 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-212ENST00000607272 AOPEPQ8N6M6 819 aa14.57□□□□□ -0.08
MSH6-212ENST00000607272 FSIP1Q8NA03 581 aa14.57□□□□□ -0.08
MSH6-212ENST00000607272 SLC24A3Q9HC58 644 aa14.57□□□□□ -0.08
MSH6-212ENST00000607272 LTN1O94822 1766 aa14.57□□□□□ -0.08
MSH6-212ENST00000607272 PRAMEF22A3QJZ6 481 aa14.57□□□□□ -0.08
MSH6-212ENST00000607272 PDIA6Q15084 440 aa14.57□□□□□ -0.08
MSH6-212ENST00000607272 HAUS7Q99871 368 aa14.57□□□□□ -0.08
MSH6-212ENST00000607272 AGXT2Q9BYV1 514 aa14.57□□□□□ -0.08
MSH6-212ENST00000607272 PHF8Q9UPP1 1060 aa14.57□□□□□ -0.08
MSH6-212ENST00000607272 ZNF609O15014 1411 aa14.57□□□□□ -0.08
MSH6-212ENST00000607272 CTDNEP1O95476 244 aa14.56□□□□□ -0.08
MSH6-212ENST00000607272 KCNJ6P48051 423 aa14.56□□□□□ -0.08
MSH6-212ENST00000607272 ZRSR1Q15695 479 aaKnown RBP14.56□□□□□ -0.08
MSH6-212ENST00000607272 FBXO38Q6PIJ6 1188 aa14.56□□□□□ -0.08
MSH6-212ENST00000607272 TICAM2Q86XR7 235 aa14.56□□□□□ -0.08
MSH6-212ENST00000607272 CCDC150Q8NCX0 1101 aa14.56□□□□□ -0.08
MSH6-212ENST00000607272 LRRC59Q96AG4 307 aaKnown RBP14.56□□□□□ -0.08
MSH6-212ENST00000607272 BPIFA3Q9BQP9 254 aa14.56□□□□□ -0.08
MSH6-212ENST00000607272 SDF4Q9BRK5 362 aa14.56□□□□□ -0.08
MSH6-212ENST00000607272 LRRC2Q9BYS8 371 aa14.56□□□□□ -0.08
MSH6-212ENST00000607272 FTOQ9C0B1 505 aaKnown RBP eCLIP14.56□□□□□ -0.08
MSH6-212ENST00000607272 NFAT5O94916 1531 aa14.56□□□□□ -0.08
MSH6-212ENST00000607272 NRDCO43847 1150 aa14.56□□□□□ -0.08
MSH6-212ENST00000607272 ELF2Q15723 593 aa14.56□□□□□ -0.08
MSH6-212ENST00000607272 ADALQ6DHV7 355 aa14.56□□□□□ -0.08
MSH6-212ENST00000607272 CCDC129Q6ZRS4 1044 aa14.56□□□□□ -0.08
MSH6-212ENST00000607272 FMR1NBQ8N0W7 255 aaPredicted RBP14.56□□□□□ -0.08
MSH6-212ENST00000607272 MRPS27Q92552 414 aaKnown RBP14.56□□□□□ -0.08
MSH6-212ENST00000607272 L2HGDHQ9H9P8 463 aa14.56□□□□□ -0.08
MSH6-212ENST00000607272 SH3TC1Q8TE82 1336 aa14.55□□□□□ -0.08
MSH6-212ENST00000607272 A0A1W2PQ27 194 aa14.55□□□□□ -0.08
MSH6-212ENST00000607272 A0A1W2PQ64 194 aa14.55□□□□□ -0.08
MSH6-212ENST00000607272 A0A1W2PQD8 194 aa14.55□□□□□ -0.08
MSH6-212ENST00000607272 PSDA5PKW4 1024 aaPredicted RBP14.55□□□□□ -0.08
MSH6-212ENST00000607272 EXOSC10Q01780 885 aaKnown RBP14.55□□□□□ -0.08
MSH6-212ENST00000607272 TFCP2Q12800 502 aa14.55□□□□□ -0.08
MSH6-212ENST00000607272 EPHA10Q5JZY3 1008 aa14.55□□□□□ -0.08
MSH6-212ENST00000607272 CREBRFQ8IUR6 639 aa14.55□□□□□ -0.08
MSH6-212ENST00000607272 DNAJC2Q99543 621 aaKnown RBP14.55□□□□□ -0.08
MSH6-212ENST00000607272 SALL1Q9NSC2 1324 aa14.55□□□□□ -0.08
MSH6-212ENST00000607272 STK25O00506 426 aa14.54□□□□□ -0.08
MSH6-212ENST00000607272 KCNA6P17658 529 aa14.54□□□□□ -0.08
MSH6-212ENST00000607272 PTPN12Q05209 780 aaKnown RBP14.54□□□□□ -0.08
MSH6-212ENST00000607272 STOX1Q6ZVD7 989 aa14.54□□□□□ -0.08
MSH6-212ENST00000607272 NBPF11Q86T75 865 aa14.54□□□□□ -0.08
MSH6-212ENST00000607272 KBTBD3Q8NAB2 608 aa14.54□□□□□ -0.08
MSH6-212ENST00000607272 ZNF274Q96GC6 653 aaPredicted RBP14.54□□□□□ -0.08
MSH6-212ENST00000607272 SEC62Q99442 399 aaKnown RBP14.54□□□□□ -0.08
MSH6-212ENST00000607272 METTL22Q9BUU2 404 aaPredicted RBP14.54□□□□□ -0.08
MSH6-212ENST00000607272 DSCC1Q9BVC3 393 aa14.54□□□□□ -0.08
MSH6-212ENST00000607272 RTEL1Q9NZ71 1219 aa14.54□□□□□ -0.08
MSH6-212ENST00000607272 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.54□□□□□ -0.08
MSH6-212ENST00000607272 V9GYY5 206 aaPredicted RBP14.54□□□□□ -0.08
MSH6-212ENST00000607272 CCDC66A2RUB6 948 aa14.54□□□□□ -0.08
MSH6-212ENST00000607272 APOBRQ0VD83 1088 aa14.54□□□□□ -0.08
MSH6-212ENST00000607272 THEMISQ8N1K5 641 aaPredicted RBP14.54□□□□□ -0.08
MSH6-212ENST00000607272 KIAA1468Q9P260 1216 aa14.54□□□□□ -0.08
MSH6-212ENST00000607272 PCDHA7Q9UN72 937 aa14.54□□□□□ -0.08
MSH6-212ENST00000607272 RFX5P48382 616 aaPredicted RBP14.53□□□□□ -0.08
MSH6-212ENST00000607272 TPM4P67936 248 aa14.53□□□□□ -0.08
MSH6-212ENST00000607272 HELLSQ9NRZ9 838 aa14.53□□□□□ -0.08
MSH6-212ENST00000607272 PXDNQ92626 1479 aa14.53□□□□□ -0.08
MSH6-212ENST00000607272 SFPQP23246 707 aaKnown RBP eCLIP14.53□□□□□ -0.08
MSH6-212ENST00000607272 FOSBP53539 338 aa14.53□□□□□ -0.08
MSH6-212ENST00000607272 CCT2P78371 535 aaKnown RBP14.53□□□□□ -0.08
MSH6-212ENST00000607272 BMS1Q14692 1282 aaKnown RBP14.53□□□□□ -0.08
MSH6-212ENST00000607272 E4F1Q66K89 784 aaPredicted RBP14.53□□□□□ -0.08
MSH6-212ENST00000607272 ZC3H15Q8WU90 426 aaKnown RBP14.53□□□□□ -0.08
MSH6-212ENST00000607272 A0A087WWV3 80 aa14.52□□□□□ -0.08
MSH6-212ENST00000607272 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.52□□□□□ -0.08
MSH6-212ENST00000607272 RABL6Q3YEC7 729 aaPredicted RBP14.52□□□□□ -0.08
MSH6-212ENST00000607272 DDX46Q7L014 1031 aaKnown RBP14.52□□□□□ -0.08
MSH6-212ENST00000607272 ILDR1Q86SU0 546 aaPredicted RBP14.52□□□□□ -0.08
MSH6-212ENST00000607272 KCNG4Q8TDN1 519 aa14.52□□□□□ -0.08
MSH6-212ENST00000607272 PPP1R13BQ96KQ4 1090 aa14.52□□□□□ -0.08
MSH6-212ENST00000607272 MYD88Q99836 296 aa14.52□□□□□ -0.08
MSH6-212ENST00000607272 DBNDD2Q9BQY9 259 aa14.52□□□□□ -0.08
MSH6-212ENST00000607272 BCL11BQ9C0K0 894 aaPredicted RBP14.52□□□□□ -0.08
MSH6-212ENST00000607272 NDUFB9Q9Y6M9 179 aa14.52□□□□□ -0.08
MSH6-212ENST00000607272 CCP110O43303 1012 aa14.51□□□□□ -0.09
MSH6-212ENST00000607272 H2AFXP16104 143 aaPredicted RBP14.51□□□□□ -0.09
MSH6-212ENST00000607272 PDIA3P30101 505 aaKnown RBP14.51□□□□□ -0.09
MSH6-212ENST00000607272 CEBPAP49715 358 aaPredicted RBP14.51□□□□□ -0.09
MSH6-212ENST00000607272 CCDC93Q567U6 631 aa14.51□□□□□ -0.09
MSH6-212ENST00000607272 XAGE3Q8WTP9 111 aa14.51□□□□□ -0.09
MSH6-212ENST00000607272 ERBB3P21860 1342 aa14.51□□□□□ -0.09
MSH6-212ENST00000607272 MYH15Q9Y2K3 1946 aa14.51□□□□□ -0.09
MSH6-212ENST00000607272 SMC2O95347 1197 aa14.51□□□□□ -0.09
MSH6-212ENST00000607272 PSME1Q06323 249 aa14.51□□□□□ -0.09
MSH6-212ENST00000607272 SF3A1Q15459 793 aaKnown RBP14.51□□□□□ -0.09
MSH6-212ENST00000607272 COPS6Q7L5N1 327 aa14.51□□□□□ -0.09
MSH6-212ENST00000607272 FBXL16Q8N461 479 aa14.51□□□□□ -0.09
MSH6-212ENST00000607272 LINC00301Q8NCQ3 95 aa14.51□□□□□ -0.09
MSH6-212ENST00000607272 XPO4Q9C0E2 1151 aaKnown RBP14.51□□□□□ -0.09
MSH6-212ENST00000607272 SETD1BQ9UPS6 1966 aaKnown RBP14.51□□□□□ -0.09
MSH6-212ENST00000607272 CARMIL3Q8ND23 1372 aa14.51□□□□□ -0.09
MSH6-212ENST00000607272 PALLDQ8WX93 1383 aa14.51□□□□□ -0.09
MSH6-212ENST00000607272 PHRF1Q9P1Y6 1649 aaKnown RBP14.5□□□□□ -0.09
MSH6-212ENST00000607272 A0A1B0GVL5 298 aa14.5□□□□□ -0.09
MSH6-212ENST00000607272 E7EWF7 191 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms