RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 PTPN12Q05209 780 aaKnown RBP19.39■□□□□ 0.69
SSBP4-214ENST00000607020 TTLL12Q14166 644 aaPredicted RBP19.39■□□□□ 0.69
SSBP4-214ENST00000607020 CDC5LQ99459 802 aaKnown RBP19.39■□□□□ 0.69
SSBP4-214ENST00000607020 METTL22Q9BUU2 404 aaPredicted RBP19.39■□□□□ 0.69
SSBP4-214ENST00000607020 MINPP1Q9UNW1 487 aa19.39■□□□□ 0.69
SSBP4-214ENST00000607020 MED23Q9ULK4 1368 aa19.39■□□□□ 0.69
SSBP4-214ENST00000607020 ALDH1A1P00352 501 aa19.38■□□□□ 0.69
SSBP4-214ENST00000607020 ARMC9Q7Z3E5 817 aa19.38■□□□□ 0.69
SSBP4-214ENST00000607020 COA1Q9GZY4 146 aa19.38■□□□□ 0.69
SSBP4-214ENST00000607020 AKAP11Q9UKA4 1901 aa19.37■□□□□ 0.69
SSBP4-214ENST00000607020 WTIPA6NIX2 430 aaPredicted RBP19.37■□□□□ 0.69
SSBP4-214ENST00000607020 INHBEP58166 350 aa19.37■□□□□ 0.69
SSBP4-214ENST00000607020 SPRYD7Q5W111 196 aa19.37■□□□□ 0.69
SSBP4-214ENST00000607020 CCDC85AQ96PX6 553 aaPredicted RBP19.37■□□□□ 0.69
SSBP4-214ENST00000607020 CHMP4AQ9BY43 222 aa19.37■□□□□ 0.69
SSBP4-214ENST00000607020 R3HDMLQ9H3Y0 253 aa19.37■□□□□ 0.69
SSBP4-214ENST00000607020 CTSWP56202 376 aa19.36■□□□□ 0.69
SSBP4-214ENST00000607020 INTS3Q68E01 1043 aaKnown RBP19.36■□□□□ 0.69
SSBP4-214ENST00000607020 TTLL11Q8NHH1 800 aa19.36■□□□□ 0.69
SSBP4-214ENST00000607020 JARID2Q92833 1246 aaPredicted RBP19.36■□□□□ 0.69
SSBP4-214ENST00000607020 ZBED3Q96IU2 234 aaPredicted RBP19.36■□□□□ 0.69
SSBP4-214ENST00000607020 DDX58O95786 925 aaKnown RBP19.35■□□□□ 0.69
SSBP4-214ENST00000607020 CCT4P50991 539 aaKnown RBP19.35■□□□□ 0.69
SSBP4-214ENST00000607020 APOBEC3FQ8IUX4 373 aaKnown RBP19.35■□□□□ 0.69
SSBP4-214ENST00000607020 MXD3Q9BW11 206 aa19.35■□□□□ 0.69
SSBP4-214ENST00000607020 ADAMTS8Q9UP79 889 aa19.35■□□□□ 0.69
SSBP4-214ENST00000607020 LEMD3Q9Y2U8 911 aa19.35■□□□□ 0.69
SSBP4-214ENST00000607020 MKRN3Q13064 507 aaKnown RBP19.34■□□□□ 0.69
SSBP4-214ENST00000607020 MAP3K11Q16584 847 aa19.34■□□□□ 0.69
SSBP4-214ENST00000607020 IFT57Q9NWB7 429 aa19.34■□□□□ 0.69
SSBP4-214ENST00000607020 MYBBP1AQ9BQG0 1328 aaKnown RBP19.33■□□□□ 0.69
SSBP4-214ENST00000607020 MANSC4A6NHS7 340 aaPredicted RBP19.33■□□□□ 0.68
SSBP4-214ENST00000607020 UNCXA6NJT0 531 aa19.33■□□□□ 0.68
SSBP4-214ENST00000607020 ZEB1P37275 1124 aaPredicted RBP19.33■□□□□ 0.68
SSBP4-214ENST00000607020 WDR43Q15061 677 aaKnown RBP eCLIP19.33■□□□□ 0.68
SSBP4-214ENST00000607020 TTLL5Q6EMB2 1281 aa19.33■□□□□ 0.68
SSBP4-214ENST00000607020 GNAI1P63096 354 aa19.32■□□□□ 0.68
SSBP4-214ENST00000607020 TXNRD3Q86VQ6 643 aa19.32■□□□□ 0.68
SSBP4-214ENST00000607020 IFNL1Q8IU54 200 aa19.32■□□□□ 0.68
SSBP4-214ENST00000607020 GREM2Q9H772 168 aa19.32■□□□□ 0.68
SSBP4-214ENST00000607020 SASH1O94885 1247 aa19.31■□□□□ 0.68
SSBP4-214ENST00000607020 IGKV5-2P06315 115 aa19.31■□□□□ 0.68
SSBP4-214ENST00000607020 ZBTB48P10074 688 aaPredicted RBP19.31■□□□□ 0.68
SSBP4-214ENST00000607020 CALD1Q05682 793 aaKnown RBP19.31■□□□□ 0.68
SSBP4-214ENST00000607020 HABP4Q5JVS0 413 aaKnown RBP19.31■□□□□ 0.68
SSBP4-214ENST00000607020 CCDC30Q5VVM6 783 aa19.31■□□□□ 0.68
SSBP4-214ENST00000607020 KSR2Q6VAB6 950 aa19.31■□□□□ 0.68
SSBP4-214ENST00000607020 SLC10A4Q96EP9 437 aa19.31■□□□□ 0.68
SSBP4-214ENST00000607020 ANGEL1Q9UNK9 670 aaKnown RBP19.31■□□□□ 0.68
SSBP4-214ENST00000607020 ELL2O00472 640 aaPredicted RBP19.3■□□□□ 0.68
SSBP4-214ENST00000607020 OTOP1Q7RTM1 612 aa19.3■□□□□ 0.68
SSBP4-214ENST00000607020 C8orf58Q8NAV2 365 aa19.3■□□□□ 0.68
SSBP4-214ENST00000607020 MTMR14Q8NCE2 650 aa19.3■□□□□ 0.68
SSBP4-214ENST00000607020 ANKRD2Q9GZV1 360 aa19.3■□□□□ 0.68
SSBP4-214ENST00000607020 MAP3K2Q9Y2U5 619 aa19.3■□□□□ 0.68
SSBP4-214ENST00000607020 H7C1W4 665 aa19.29■□□□□ 0.68
SSBP4-214ENST00000607020 PRKG1Q13976 671 aa19.29■□□□□ 0.68
SSBP4-214ENST00000607020 DEFB129Q9H1M3 183 aa19.29■□□□□ 0.68
SSBP4-214ENST00000607020 TRIM17Q9Y577 477 aa19.29■□□□□ 0.68
SSBP4-214ENST00000607020 PPP2R3BQ9Y5P8 575 aa19.29■□□□□ 0.68
SSBP4-214ENST00000607020 ZNF804BA4D1E1 1349 aa19.28■□□□□ 0.68
SSBP4-214ENST00000607020 KIAA0825Q8IV33 1275 aa19.28■□□□□ 0.68
SSBP4-214ENST00000607020 FBXW7Q969H0 707 aa19.28■□□□□ 0.68
SSBP4-214ENST00000607020 COL1A1P02452 1464 aaPredicted RBP19.28■□□□□ 0.68
SSBP4-214ENST00000607020 PI4KAP2A4QPH2 592 aa19.27■□□□□ 0.68
SSBP4-214ENST00000607020 POTEFA5A3E0 1075 aa19.27■□□□□ 0.68
SSBP4-214ENST00000607020 PPP1R12BO60237 982 aaPredicted RBP19.27■□□□□ 0.68
SSBP4-214ENST00000607020 IGHMBP2P38935 993 aaKnown RBP19.27■□□□□ 0.68
SSBP4-214ENST00000607020 GTF2IP78347 998 aa19.27■□□□□ 0.68
SSBP4-214ENST00000607020 PI4KAP1Q8N8J0 262 aa19.27■□□□□ 0.68
SSBP4-214ENST00000607020 WNK4Q96J92 1243 aa19.27■□□□□ 0.68
SSBP4-214ENST00000607020 PLA2G12BQ9BX93 195 aa19.27■□□□□ 0.68
SSBP4-214ENST00000607020 PSME4Q14997 1843 aa19.27■□□□□ 0.68
SSBP4-214ENST00000607020 IGF2BP3O00425 579 aaKnown RBP eCLIP19.26■□□□□ 0.67
SSBP4-214ENST00000607020 NEXNQ0ZGT2 675 aa19.26■□□□□ 0.67
SSBP4-214ENST00000607020 DLGAP5Q15398 846 aa19.26■□□□□ 0.67
SSBP4-214ENST00000607020 ARMC5Q96C12 935 aa19.26■□□□□ 0.67
SSBP4-214ENST00000607020 ERO1AQ96HE7 468 aa19.26■□□□□ 0.67
SSBP4-214ENST00000607020 PTPN22Q9Y2R2 807 aa19.26■□□□□ 0.67
SSBP4-214ENST00000607020 NEURL1BA8MQ27 555 aa19.25■□□□□ 0.67
SSBP4-214ENST00000607020 SUPT20HL1Q3ZLR7 823 aa19.25■□□□□ 0.67
SSBP4-214ENST00000607020 OTUD7BQ6GQQ9 843 aa19.25■□□□□ 0.67
SSBP4-214ENST00000607020 C15orf52Q6ZUT6 534 aaKnown RBP19.25■□□□□ 0.67
SSBP4-214ENST00000607020 CD209Q9NNX6 404 aa19.25■□□□□ 0.67
SSBP4-214ENST00000607020 TESPA1A2RU30 521 aaPredicted RBP19.24■□□□□ 0.67
SSBP4-214ENST00000607020 CSF1RP07333 972 aa19.24■□□□□ 0.67
SSBP4-214ENST00000607020 KLRK1P26718 216 aa19.24■□□□□ 0.67
SSBP4-214ENST00000607020 CLMNQ96JQ2 1002 aa19.24■□□□□ 0.67
SSBP4-214ENST00000607020 FZD1Q9UP38 647 aa19.24■□□□□ 0.67
SSBP4-214ENST00000607020 HTTP42858 3142 aa19.23■□□□□ 0.67
SSBP4-214ENST00000607020 APAF1O14727 1248 aa19.23■□□□□ 0.67
SSBP4-214ENST00000607020 ITGA6P23229 1130 aa19.23■□□□□ 0.67
SSBP4-214ENST00000607020 FKBP1AP62942 108 aaKnown RBP19.23■□□□□ 0.67
SSBP4-214ENST00000607020 CWF19L2Q2TBE0 894 aaKnown RBP19.23■□□□□ 0.67
SSBP4-214ENST00000607020 IRS2Q9Y4H2 1338 aa19.23■□□□□ 0.67
SSBP4-214ENST00000607020 UBE3BQ7Z3V4 1068 aa19.22■□□□□ 0.67
SSBP4-214ENST00000607020 CERS5Q8N5B7 392 aa19.22■□□□□ 0.67
SSBP4-214ENST00000607020 TSPYL6Q8N831 410 aa19.22■□□□□ 0.67
SSBP4-214ENST00000607020 MPHOSPH8Q99549 860 aa19.22■□□□□ 0.67
SSBP4-214ENST00000607020 SPDYE2BA6NHP3 402 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms