RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 EIF6P56537 245 aaKnown RBP17.71■□□□□ 0.43
CTSA-211ENST00000606066 CEP85Q6P2H3 762 aa17.71■□□□□ 0.43
CTSA-211ENST00000606066 SSH3Q8TE77 659 aa17.71■□□□□ 0.43
CTSA-211ENST00000606066 SIL1Q9H173 461 aa17.71■□□□□ 0.43
CTSA-211ENST00000606066 ZNRF3Q9ULT6 936 aa17.71■□□□□ 0.43
CTSA-211ENST00000606066 MED23Q9ULK4 1368 aa17.7■□□□□ 0.42
CTSA-211ENST00000606066 PDE8BO95263 885 aa17.7■□□□□ 0.42
CTSA-211ENST00000606066 ITGBL1O95965 494 aaPredicted RBP17.7■□□□□ 0.42
CTSA-211ENST00000606066 UBE4AQ14139 1066 aa17.7■□□□□ 0.42
CTSA-211ENST00000606066 POLA2Q14181 598 aa17.7■□□□□ 0.42
CTSA-211ENST00000606066 MKRN1Q9UHC7 482 aaKnown RBP17.7■□□□□ 0.42
CTSA-211ENST00000606066 PA2G4Q9UQ80 394 aaKnown RBP17.7■□□□□ 0.42
CTSA-211ENST00000606066 HMMRO75330 724 aa17.69■□□□□ 0.42
CTSA-211ENST00000606066 G3BP1Q13283 466 aaKnown RBP eCLIP17.69■□□□□ 0.42
CTSA-211ENST00000606066 ATG9AQ7Z3C6 839 aa17.69■□□□□ 0.42
CTSA-211ENST00000606066 GPR101Q96P66 508 aaPredicted RBP17.69■□□□□ 0.42
CTSA-211ENST00000606066 CEP126Q9P2H0 1117 aa17.69■□□□□ 0.42
CTSA-211ENST00000606066 DUOX1Q9NRD9 1551 aa17.69■□□□□ 0.42
CTSA-211ENST00000606066 CNTNAP1P78357 1384 aa17.68■□□□□ 0.42
CTSA-211ENST00000606066 C15orf52Q6ZUT6 534 aaKnown RBP17.68■□□□□ 0.42
CTSA-211ENST00000606066 PRDM10Q9NQV6 1147 aa17.68■□□□□ 0.42
CTSA-211ENST00000606066 TMEM88BA6NKF7 163 aa17.67■□□□□ 0.42
CTSA-211ENST00000606066 SURF6O75683 361 aaKnown RBP17.67■□□□□ 0.42
CTSA-211ENST00000606066 AAMPQ13685 434 aa17.67■□□□□ 0.42
CTSA-211ENST00000606066 PUM3Q15397 648 aaKnown RBP17.67■□□□□ 0.42
CTSA-211ENST00000606066 DOK7Q18PE1 504 aa17.67■□□□□ 0.42
CTSA-211ENST00000606066 PODNQ7Z5L7 613 aa17.67■□□□□ 0.42
CTSA-211ENST00000606066 PNMA8AQ86V59 439 aaPredicted RBP17.67■□□□□ 0.42
CTSA-211ENST00000606066 VGLL2Q8N8G2 317 aa17.67■□□□□ 0.42
CTSA-211ENST00000606066 CRBNQ96SW2 442 aa17.67■□□□□ 0.42
CTSA-211ENST00000606066 COA1Q9GZY4 146 aa17.67■□□□□ 0.42
CTSA-211ENST00000606066 DBNDD1Q9H9R9 158 aa17.67■□□□□ 0.42
CTSA-211ENST00000606066 HACL1Q9UJ83 578 aa17.67■□□□□ 0.42
CTSA-211ENST00000606066 WTIPA6NIX2 430 aaPredicted RBP17.66■□□□□ 0.42
CTSA-211ENST00000606066 ECE2O60344 883 aa17.66■□□□□ 0.42
CTSA-211ENST00000606066 IFIT1P09914 478 aaKnown RBP17.66■□□□□ 0.42
CTSA-211ENST00000606066 OS9Q13438 667 aaPredicted RBP17.66■□□□□ 0.42
CTSA-211ENST00000606066 TNIP1Q15025 636 aa17.66■□□□□ 0.42
CTSA-211ENST00000606066 GPC2Q8N158 579 aa17.66■□□□□ 0.42
CTSA-211ENST00000606066 LTBP1Q14766 1721 aa17.66■□□□□ 0.42
CTSA-211ENST00000606066 SNAP23O00161 211 aa17.65■□□□□ 0.42
CTSA-211ENST00000606066 HSP90AB4PQ58FF6 505 aa17.65■□□□□ 0.42
CTSA-211ENST00000606066 CIAPIN1Q6FI81 312 aa17.65■□□□□ 0.42
CTSA-211ENST00000606066 ZNF804AQ7Z570 1209 aa17.65■□□□□ 0.42
CTSA-211ENST00000606066 LPIN2Q92539 896 aa17.65■□□□□ 0.42
CTSA-211ENST00000606066 AKAP2Q9Y2D5 859 aa17.65■□□□□ 0.42
CTSA-211ENST00000606066 NOP58Q9Y2X3 529 aaKnown RBP17.65■□□□□ 0.42
CTSA-211ENST00000606066 SPEF2Q9C093 1822 aa17.64■□□□□ 0.41
CTSA-211ENST00000606066 FOXN1O15353 648 aa17.64■□□□□ 0.41
CTSA-211ENST00000606066 SLC5A1P13866 664 aa17.64■□□□□ 0.41
CTSA-211ENST00000606066 EPHX2P34913 555 aa17.64■□□□□ 0.41
CTSA-211ENST00000606066 VEGFBP49765 207 aa17.64■□□□□ 0.41
CTSA-211ENST00000606066 CXCL9Q07325 125 aa17.64■□□□□ 0.41
CTSA-211ENST00000606066 CAVIN4Q5BKX8 364 aa17.64■□□□□ 0.41
CTSA-211ENST00000606066 TXNRD3Q86VQ6 643 aa17.64■□□□□ 0.41
CTSA-211ENST00000606066 GJA3Q9Y6H8 435 aa17.64■□□□□ 0.41
CTSA-211ENST00000606066 ZNF541Q9H0D2 1346 aa17.64■□□□□ 0.41
CTSA-211ENST00000606066 YDJCA8MPS7 323 aa17.63■□□□□ 0.41
CTSA-211ENST00000606066 RAD17O75943 681 aa17.63■□□□□ 0.41
CTSA-211ENST00000606066 FGFR2P21802 821 aa17.63■□□□□ 0.41
CTSA-211ENST00000606066 KLRK1P26718 216 aa17.63■□□□□ 0.41
CTSA-211ENST00000606066 CTCFP49711 727 aaPredicted RBP17.63■□□□□ 0.41
CTSA-211ENST00000606066 ATP2B3Q16720 1220 aa17.63■□□□□ 0.41
CTSA-211ENST00000606066 VPS37DQ86XT2 251 aa17.63■□□□□ 0.41
CTSA-211ENST00000606066 ERC1Q8IUD2 1116 aa17.63■□□□□ 0.41
CTSA-211ENST00000606066 CNTROBQ8N137 903 aa17.63■□□□□ 0.41
CTSA-211ENST00000606066 WBP1LQ9NX94 342 aa17.63■□□□□ 0.41
CTSA-211ENST00000606066 COL4A5P29400 1685 aa17.62■□□□□ 0.41
CTSA-211ENST00000606066 HIBADHP31937 336 aaKnown RBP17.62■□□□□ 0.41
CTSA-211ENST00000606066 TFCP2Q12800 502 aa17.62■□□□□ 0.41
CTSA-211ENST00000606066 EAPPQ56P03 285 aaPredicted RBP17.62■□□□□ 0.41
CTSA-211ENST00000606066 SIRT2Q8IXJ6 389 aa17.62■□□□□ 0.41
CTSA-211ENST00000606066 CD209Q9NNX6 404 aa17.62■□□□□ 0.41
CTSA-211ENST00000606066 IRS2Q9Y4H2 1338 aa17.62■□□□□ 0.41
CTSA-211ENST00000606066 RASSF10A6NK89 507 aa17.61■□□□□ 0.41
CTSA-211ENST00000606066 CENPBP07199 599 aaPredicted RBP17.61■□□□□ 0.41
CTSA-211ENST00000606066 CLEC11AQ9Y240 323 aa17.61■□□□□ 0.41
CTSA-211ENST00000606066 TIAM2Q8IVF5 1701 aa17.61■□□□□ 0.41
CTSA-211ENST00000606066 DICER1Q9UPY3 1922 aaKnown RBP17.6■□□□□ 0.41
CTSA-211ENST00000606066 USP17L3A6NCW0 530 aa17.6■□□□□ 0.41
CTSA-211ENST00000606066 USP17L4A6NCW7 530 aa17.6■□□□□ 0.41
CTSA-211ENST00000606066 SASH1O94885 1247 aa17.6■□□□□ 0.41
CTSA-211ENST00000606066 IL1R1P14778 569 aa17.6■□□□□ 0.41
CTSA-211ENST00000606066 GYG1P46976 350 aa17.6■□□□□ 0.41
CTSA-211ENST00000606066 DEFB115Q30KQ5 88 aa17.6■□□□□ 0.41
CTSA-211ENST00000606066 USP17L1Q7RTZ2 530 aa17.6■□□□□ 0.41
CTSA-211ENST00000606066 AIDAQ96BJ3 306 aa17.6■□□□□ 0.41
CTSA-211ENST00000606066 FAM84BQ96KN1 310 aaPredicted RBP17.6■□□□□ 0.41
CTSA-211ENST00000606066 CCDC88AQ3V6T2 1871 aa17.59■□□□□ 0.41
CTSA-211ENST00000606066 PSMD14O00487 310 aa17.59■□□□□ 0.41
CTSA-211ENST00000606066 RAB11FIP3O75154 756 aa17.59■□□□□ 0.41
CTSA-211ENST00000606066 VIL1P09327 827 aaKnown RBP17.59■□□□□ 0.41
CTSA-211ENST00000606066 LMOD1P29536 600 aaPredicted RBP17.59■□□□□ 0.41
CTSA-211ENST00000606066 STRIP1Q5VSL9 837 aa17.59■□□□□ 0.41
CTSA-211ENST00000606066 FBXO33Q7Z6M2 555 aa17.59■□□□□ 0.41
CTSA-211ENST00000606066 GPR108Q9NPR9 543 aa17.59■□□□□ 0.41
CTSA-211ENST00000606066 KCNQ5Q9NR82 932 aa17.59■□□□□ 0.41
CTSA-211ENST00000606066 EXOC6BQ9Y2D4 811 aa17.59■□□□□ 0.41
CTSA-211ENST00000606066 A0A1B0GUL7 405 aa17.58■□□□□ 0.4
CTSA-211ENST00000606066 FRAT2O75474 233 aaPredicted RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 1013.3 ms