RNA–Protein interactions for RNA: ENST00000605910.1

TRAM2-AS1-202, Transcript of TRAM2 antisense RNA 1 (head to head), humanhuman

TSL 3 BASIC

Gene TRAM2-AS1, Length 1,053 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM2-AS1-202ENST00000605910 FRAT1Q92837 279 aaPredicted RBP11.53□□□□□ -0.56
TRAM2-AS1-202ENST00000605910 RCAN3Q9UKA8 241 aa11.53□□□□□ -0.56
TRAM2-AS1-202ENST00000605910 BRCA1P38398 1863 aaKnown RBP11.53□□□□□ -0.56
TRAM2-AS1-202ENST00000605910 SLC34A2O95436 690 aa11.52□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 RTL5Q5HYW3 569 aaPredicted RBP11.52□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 INTS3Q68E01 1043 aaKnown RBP11.52□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 PRPF40BQ6NWY9 871 aaKnown RBP11.52□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 UBE3BQ7Z3V4 1068 aa11.52□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 SYNE4Q8N205 404 aa11.52□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 UTYO14607 1347 aa11.52□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 ARFGEF1Q9Y6D6 1849 aa11.51□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 CASP7P55210 303 aa11.51□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 CTSWP56202 376 aa11.51□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 GRAPQ13588 217 aa11.51□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 MFSD10Q14728 455 aa11.51□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 RTKN2Q8IZC4 609 aa11.51□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 GRAPLQ8TC17 118 aaPredicted RBP11.51□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 RRAGCQ9HB90 399 aa11.51□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 LAMB2P55268 1798 aa11.51□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 COL11A2P13942 1736 aaPredicted RBP11.5□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 DDX60Q8IY21 1712 aaKnown RBP11.5□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 CSF1RP07333 972 aa11.5□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 TRIM27P14373 513 aa11.5□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 SP8Q8IXZ3 490 aa11.5□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 FTSJ3Q8IY81 847 aaKnown RBP11.5□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 DZIP1LQ8IYY4 767 aaKnown RBP11.5□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 TTLL11Q8NHH1 800 aa11.5□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 CDC5LQ99459 802 aaKnown RBP11.5□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 ZSWIM6Q9HCJ5 1215 aa11.5□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 ABCC4O15439 1325 aa11.5□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 KDM2BQ8NHM5 1336 aa11.5□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 RTL9Q8NET4 1388 aa11.5□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 TNRC6CQ9HCJ0 1690 aaKnown RBP11.49□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 PPEF1O14829 653 aaPredicted RBP11.49□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 C21orf2O43822 256 aa11.49□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 GNAI3P08754 354 aa11.49□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 HSPA1AP0DMV8 641 aaKnown RBP11.49□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 HSPA1BP0DMV9 641 aaKnown RBP11.49□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 RPS8P62241 208 aaKnown RBP11.49□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 CCDC93Q567U6 631 aa11.49□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 KRI1Q8N9T8 703 aaKnown RBP11.49□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 SMC1BQ8NDV3 1235 aa11.49□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 C7orf43Q8WVR3 580 aa11.49□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 JARID2Q92833 1246 aaPredicted RBP11.49□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 USP44Q9H0E7 712 aa11.49□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 CHMP4BQ9H444 224 aaKnown RBP11.49□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 ATP6V0A2Q9Y487 856 aa11.49□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 NBPF7P0C2Y1 421 aaPredicted RBP11.48□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 UBTFL1P0CB47 393 aaPredicted RBP11.48□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 ANKRD18AQ8IVF6 992 aa11.48□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 VPS33BQ9H267 617 aa11.48□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 LTBP3Q9NS15 1303 aa11.48□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 ANKRD18BA2A2Z9 1011 aa11.47□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 IGHMBP2P38935 993 aaKnown RBP11.47□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 FOXO4P98177 505 aa11.47□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 IFIT5Q13325 482 aaKnown RBP11.47□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 CCDC57Q2TAC2 916 aa11.47□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 SUPT20HQ8NEM7 779 aa11.47□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 ZMYND15Q9H091 742 aa11.47□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 MYH3P11055 1940 aa11.47□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 SLX4Q8IY92 1834 aa11.46□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 HOXB1P14653 301 aaPredicted RBP11.46□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 ITGA6P23229 1130 aa11.46□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 FKBP4Q02790 459 aaKnown RBP eCLIP11.46□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 PDE3AQ14432 1141 aa11.46□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 RABL6Q3YEC7 729 aaPredicted RBP11.46□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 ARSIQ5FYB1 569 aa11.46□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 LMBR1LQ6UX01 489 aa11.46□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 MARVELD3Q96A59 401 aa11.46□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 CLUAP1Q96AJ1 413 aa11.46□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 PSMD1Q99460 953 aa11.46□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 TAOK3Q9H2K8 898 aa11.46□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 BSDC1Q9NW68 430 aaPredicted RBP11.46□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 RNF181Q9P0P0 153 aa11.46□□□□□ -0.57
TRAM2-AS1-202ENST00000605910 LMNB1P20700 586 aa11.45□□□□□ -0.58
TRAM2-AS1-202ENST00000605910 EMP3P54852 163 aa11.45□□□□□ -0.58
TRAM2-AS1-202ENST00000605910 MPNDQ8N594 471 aa11.45□□□□□ -0.58
TRAM2-AS1-202ENST00000605910 TMEM57Q8N5G2 664 aa11.45□□□□□ -0.58
TRAM2-AS1-202ENST00000605910 CELF1Q92879 486 aaKnown RBP11.45□□□□□ -0.58
TRAM2-AS1-202ENST00000605910 SUCLG2Q96I99 432 aa11.45□□□□□ -0.58
TRAM2-AS1-202ENST00000605910 MPHOSPH8Q99549 860 aa11.45□□□□□ -0.58
TRAM2-AS1-202ENST00000605910 GREM2Q9H772 168 aa11.45□□□□□ -0.58
TRAM2-AS1-202ENST00000605910 SEC31BQ9NQW1 1179 aa11.45□□□□□ -0.58
TRAM2-AS1-202ENST00000605910 CHMP3Q9Y3E7 222 aa11.45□□□□□ -0.58
TRAM2-AS1-202ENST00000605910 PCDHGA4Q9Y5G9 962 aa11.45□□□□□ -0.58
TRAM2-AS1-202ENST00000605910 CACNA1SQ13698 1873 aa11.44□□□□□ -0.58
TRAM2-AS1-202ENST00000605910 ZC3H4Q9UPT8 1303 aaKnown RBP11.44□□□□□ -0.58
TRAM2-AS1-202ENST00000605910 TBC1D12O60347 775 aa11.44□□□□□ -0.58
TRAM2-AS1-202ENST00000605910 GNAI2P04899 355 aa11.44□□□□□ -0.58
TRAM2-AS1-202ENST00000605910 TAF7LQ5H9L4 462 aa11.44□□□□□ -0.58
TRAM2-AS1-202ENST00000605910 GPR153Q6NV75 609 aa11.44□□□□□ -0.58
TRAM2-AS1-202ENST00000605910 DPP8Q6V1X1 898 aaPredicted RBP11.44□□□□□ -0.58
TRAM2-AS1-202ENST00000605910 ITPRIPQ8IWB1 547 aa11.44□□□□□ -0.58
TRAM2-AS1-202ENST00000605910 CCDC85AQ96PX6 553 aaPredicted RBP11.44□□□□□ -0.58
TRAM2-AS1-202ENST00000605910 BICC1Q9H694 974 aaKnown RBP11.44□□□□□ -0.58
TRAM2-AS1-202ENST00000605910 FER1L6Q2WGJ9 1857 aa11.43□□□□□ -0.58
TRAM2-AS1-202ENST00000605910 NFKBIEO00221 500 aa11.43□□□□□ -0.58
TRAM2-AS1-202ENST00000605910 VEGFAP15692 232 aaPredicted RBP11.43□□□□□ -0.58
TRAM2-AS1-202ENST00000605910 FAM161AQ3B820 660 aa11.43□□□□□ -0.58
TRAM2-AS1-202ENST00000605910 EPHA10Q5JZY3 1008 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms