RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 DACT2Q5SW24 774 aa13.5□□□□□ -0.25
TUBE1-210ENST00000604967 CREBZFQ9NS37 354 aa13.5□□□□□ -0.25
TUBE1-210ENST00000604967 LEMD3Q9Y2U8 911 aa13.5□□□□□ -0.25
TUBE1-210ENST00000604967 LRRC24Q50LG9 513 aa13.49□□□□□ -0.25
TUBE1-210ENST00000604967 RSBN1LQ6PCB5 846 aaPredicted RBP13.49□□□□□ -0.25
TUBE1-210ENST00000604967 MPHOSPH8Q99549 860 aa13.49□□□□□ -0.25
TUBE1-210ENST00000604967 MKRN1Q9UHC7 482 aaKnown RBP13.49□□□□□ -0.25
TUBE1-210ENST00000604967 RIPOR2Q9Y4F9 1068 aa13.49□□□□□ -0.25
TUBE1-210ENST00000604967 ZNF280AP59817 542 aaPredicted RBP13.48□□□□□ -0.25
TUBE1-210ENST00000604967 CERS5Q8N5B7 392 aa13.48□□□□□ -0.25
TUBE1-210ENST00000604967 CNTNAP1P78357 1384 aa13.47□□□□□ -0.25
TUBE1-210ENST00000604967 USP17L3A6NCW0 530 aa13.47□□□□□ -0.25
TUBE1-210ENST00000604967 USP17L4A6NCW7 530 aa13.47□□□□□ -0.25
TUBE1-210ENST00000604967 TRIM27P14373 513 aa13.47□□□□□ -0.25
TUBE1-210ENST00000604967 RPS12P25398 132 aaKnown RBP13.47□□□□□ -0.25
TUBE1-210ENST00000604967 CCDC57Q2TAC2 916 aa13.47□□□□□ -0.25
TUBE1-210ENST00000604967 RBM26Q5T8P6 1007 aaKnown RBP13.47□□□□□ -0.25
TUBE1-210ENST00000604967 LDHAL6AQ6ZMR3 332 aa13.47□□□□□ -0.25
TUBE1-210ENST00000604967 C15orf52Q6ZUT6 534 aaKnown RBP13.47□□□□□ -0.25
TUBE1-210ENST00000604967 USP17L1Q7RTZ2 530 aa13.47□□□□□ -0.25
TUBE1-210ENST00000604967 PODNQ7Z5L7 613 aa13.47□□□□□ -0.25
TUBE1-210ENST00000604967 VGLL2Q8N8G2 317 aa13.47□□□□□ -0.25
TUBE1-210ENST00000604967 MEIS3Q99687 375 aa13.47□□□□□ -0.25
TUBE1-210ENST00000604967 ANKRD2Q9GZV1 360 aa13.47□□□□□ -0.25
TUBE1-210ENST00000604967 SCAF8Q9UPN6 1271 aaKnown RBP13.47□□□□□ -0.25
TUBE1-210ENST00000604967 AOX1Q06278 1338 aa13.46□□□□□ -0.25
TUBE1-210ENST00000604967 TMEM88BA6NKF7 163 aa13.46□□□□□ -0.25
TUBE1-210ENST00000604967 ADM5C9JUS6 153 aa13.46□□□□□ -0.25
TUBE1-210ENST00000604967 PLIN1O60240 522 aa13.46□□□□□ -0.25
TUBE1-210ENST00000604967 COA1Q9GZY4 146 aa13.46□□□□□ -0.25
TUBE1-210ENST00000604967 CD209Q9NNX6 404 aa13.46□□□□□ -0.25
TUBE1-210ENST00000604967 JAG2Q9Y219 1238 aa13.46□□□□□ -0.25
TUBE1-210ENST00000604967 PCDHAC2Q9Y5I4 1007 aa13.46□□□□□ -0.25
TUBE1-210ENST00000604967 H7C1D1 291 aa13.45□□□□□ -0.26
TUBE1-210ENST00000604967 VEGFBP49765 207 aa13.45□□□□□ -0.26
TUBE1-210ENST00000604967 KIF4BQ2VIQ3 1234 aa13.45□□□□□ -0.26
TUBE1-210ENST00000604967 USP48Q86UV5 1035 aa13.45□□□□□ -0.26
TUBE1-210ENST00000604967 AGBL3Q8NEM8 1001 aa13.45□□□□□ -0.26
TUBE1-210ENST00000604967 POLR2AP24928 1970 aaKnown RBP13.44□□□□□ -0.26
TUBE1-210ENST00000604967 RASSF10A6NK89 507 aa13.44□□□□□ -0.26
TUBE1-210ENST00000604967 GYG1P46976 350 aa13.44□□□□□ -0.26
TUBE1-210ENST00000604967 GTF2IP78347 998 aa13.44□□□□□ -0.26
TUBE1-210ENST00000604967 PTPN12Q05209 780 aaKnown RBP13.44□□□□□ -0.26
TUBE1-210ENST00000604967 GRIK5Q16478 980 aa13.44□□□□□ -0.26
TUBE1-210ENST00000604967 STRIP1Q5VSL9 837 aa13.44□□□□□ -0.26
TUBE1-210ENST00000604967 INTS3Q68E01 1043 aaKnown RBP13.44□□□□□ -0.26
TUBE1-210ENST00000604967 ATG9AQ7Z3C6 839 aa13.44□□□□□ -0.26
TUBE1-210ENST00000604967 ZC3H15Q8WU90 426 aaKnown RBP13.44□□□□□ -0.26
TUBE1-210ENST00000604967 FAM84BQ96KN1 310 aaPredicted RBP13.44□□□□□ -0.26
TUBE1-210ENST00000604967 CNNM1Q9NRU3 951 aa13.44□□□□□ -0.26
TUBE1-210ENST00000604967 LRRFIP2Q9Y608 721 aaKnown RBP13.44□□□□□ -0.26
TUBE1-210ENST00000604967 ZBED9Q6R2W3 1325 aa13.43□□□□□ -0.26
TUBE1-210ENST00000604967 G3V3G9 751 aa13.43□□□□□ -0.26
TUBE1-210ENST00000604967 USP17L8P0C7I0 530 aa13.43□□□□□ -0.26
TUBE1-210ENST00000604967 IL1R1P14778 569 aa13.43□□□□□ -0.26
TUBE1-210ENST00000604967 SCARF1Q14162 830 aa13.43□□□□□ -0.26
TUBE1-210ENST00000604967 NBPF9Q3BBW0 867 aa13.43□□□□□ -0.26
TUBE1-210ENST00000604967 DCAF8Q5TAQ9 597 aa13.43□□□□□ -0.26
TUBE1-210ENST00000604967 ARHGAP45Q92619 1136 aa13.43□□□□□ -0.26
TUBE1-210ENST00000604967 ZBED3Q96IU2 234 aaPredicted RBP13.43□□□□□ -0.26
TUBE1-210ENST00000604967 API5Q9BZZ5 524 aaKnown RBP13.43□□□□□ -0.26
TUBE1-210ENST00000604967 MYOZ2Q9NPC6 264 aa13.43□□□□□ -0.26
TUBE1-210ENST00000604967 GGA3Q9NZ52 723 aa13.43□□□□□ -0.26
TUBE1-210ENST00000604967 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.43□□□□□ -0.26
TUBE1-210ENST00000604967 TRPM7Q96QT4 1865 aa13.42□□□□□ -0.26
TUBE1-210ENST00000604967 CELF2O95319 508 aaKnown RBP13.42□□□□□ -0.26
TUBE1-210ENST00000604967 RLBP1P12271 317 aa13.42□□□□□ -0.26
TUBE1-210ENST00000604967 KCNJ4P48050 445 aa13.42□□□□□ -0.26
TUBE1-210ENST00000604967 TAF7LQ5H9L4 462 aa13.42□□□□□ -0.26
TUBE1-210ENST00000604967 ANGEL2Q5VTE6 544 aaKnown RBP13.42□□□□□ -0.26
TUBE1-210ENST00000604967 TTLL5Q6EMB2 1281 aa13.42□□□□□ -0.26
TUBE1-210ENST00000604967 FBXW7Q969H0 707 aa13.42□□□□□ -0.26
TUBE1-210ENST00000604967 CLUAP1Q96AJ1 413 aa13.42□□□□□ -0.26
TUBE1-210ENST00000604967 PA2G4Q9UQ80 394 aaKnown RBP13.42□□□□□ -0.26
TUBE1-210ENST00000604967 KIF16BQ96L93 1317 aa13.41□□□□□ -0.26
TUBE1-210ENST00000604967 FGFR2P21802 821 aa13.41□□□□□ -0.26
TUBE1-210ENST00000604967 ATF7IPQ6VMQ6 1270 aa13.41□□□□□ -0.26
TUBE1-210ENST00000604967 FBXO33Q7Z6M2 555 aa13.41□□□□□ -0.26
TUBE1-210ENST00000604967 KIAA0825Q8IV33 1275 aa13.41□□□□□ -0.26
TUBE1-210ENST00000604967 TDRD7Q8NHU6 1098 aaKnown RBP13.41□□□□□ -0.26
TUBE1-210ENST00000604967 TLL2Q9Y6L7 1015 aa13.41□□□□□ -0.26
TUBE1-210ENST00000604967 WNT10BO00744 389 aa13.4□□□□□ -0.26
TUBE1-210ENST00000604967 SASH1O94885 1247 aa13.4□□□□□ -0.26
TUBE1-210ENST00000604967 UBTFL1P0CB47 393 aaPredicted RBP13.4□□□□□ -0.26
TUBE1-210ENST00000604967 UBE4AQ14139 1066 aa13.4□□□□□ -0.26
TUBE1-210ENST00000604967 PRAMEF18Q5VWM3 479 aa13.4□□□□□ -0.26
TUBE1-210ENST00000604967 CYP4F22Q6NT55 531 aa13.4□□□□□ -0.26
TUBE1-210ENST00000604967 CDC37L1Q7L3B6 337 aa13.4□□□□□ -0.26
TUBE1-210ENST00000604967 KRT26Q7Z3Y9 468 aa13.4□□□□□ -0.26
TUBE1-210ENST00000604967 SAPCD2Q86UD0 394 aa13.4□□□□□ -0.26
TUBE1-210ENST00000604967 TMEM57Q8N5G2 664 aa13.4□□□□□ -0.26
TUBE1-210ENST00000604967 FRAT1Q92837 279 aaPredicted RBP13.4□□□□□ -0.26
TUBE1-210ENST00000604967 ZIC5Q96T25 663 aa13.4□□□□□ -0.26
TUBE1-210ENST00000604967 IQSEC3Q9UPP2 1182 aaPredicted RBP13.4□□□□□ -0.26
TUBE1-210ENST00000604967 THSD7BQ9C0I4 1608 aa13.39□□□□□ -0.27
TUBE1-210ENST00000604967 EYA2O00167 538 aa13.39□□□□□ -0.27
TUBE1-210ENST00000604967 PDE8BO95263 885 aa13.39□□□□□ -0.27
TUBE1-210ENST00000604967 HSPA1AP0DMV8 641 aaKnown RBP13.39□□□□□ -0.27
TUBE1-210ENST00000604967 HSPA1BP0DMV9 641 aaKnown RBP13.39□□□□□ -0.27
TUBE1-210ENST00000604967 BCAMP50895 628 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms