RNA–Protein interactions for RNA: ENST00000604533.1

AP001554.1-201, humanhuman

BASIC

Gene AP001554.1, Length 376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001554.1-201ENST00000604533 EYA3Q99504 573 aa9.38□□□□□ -0.91
AP001554.1-201ENST00000604533 POLLQ9UGP5 575 aa9.38□□□□□ -0.91
AP001554.1-201ENST00000604533 RTL9Q8NET4 1388 aa9.37□□□□□ -0.91
AP001554.1-201ENST00000604533 ANKRD36CQ5JPF3 1778 aa9.37□□□□□ -0.91
AP001554.1-201ENST00000604533 PTPRCP08575 1304 aa9.37□□□□□ -0.91
AP001554.1-201ENST00000604533 NEXNQ0ZGT2 675 aa9.37□□□□□ -0.91
AP001554.1-201ENST00000604533 TTLL11Q8NHH1 800 aa9.37□□□□□ -0.91
AP001554.1-201ENST00000604533 ARHGAP45Q92619 1136 aa9.37□□□□□ -0.91
AP001554.1-201ENST00000604533 CDCA5Q96FF9 252 aa9.37□□□□□ -0.91
AP001554.1-201ENST00000604533 KAZALD1Q96I82 304 aa9.37□□□□□ -0.91
AP001554.1-201ENST00000604533 SMC4Q9NTJ3 1288 aa9.37□□□□□ -0.91
AP001554.1-201ENST00000604533 GGA3Q9NZ52 723 aa9.37□□□□□ -0.91
AP001554.1-201ENST00000604533 TNNQ9UQP3 1299 aa9.37□□□□□ -0.91
AP001554.1-201ENST00000604533 TAF1P21675 1872 aa9.36□□□□□ -0.91
AP001554.1-201ENST00000604533 ASTN2O75129 1339 aaPredicted RBP9.36□□□□□ -0.91
AP001554.1-201ENST00000604533 G3V3G9 751 aa9.36□□□□□ -0.91
AP001554.1-201ENST00000604533 PDE8AO60658 829 aa9.36□□□□□ -0.91
AP001554.1-201ENST00000604533 ALDH1L1O75891 902 aa9.36□□□□□ -0.91
AP001554.1-201ENST00000604533 CSF1RP07333 972 aa9.36□□□□□ -0.91
AP001554.1-201ENST00000604533 FOXO4P98177 505 aa9.36□□□□□ -0.91
AP001554.1-201ENST00000604533 EPHA10Q5JZY3 1008 aa9.36□□□□□ -0.91
AP001554.1-201ENST00000604533 DCAF8Q5TAQ9 597 aa9.36□□□□□ -0.91
AP001554.1-201ENST00000604533 PRPF38BQ5VTL8 546 aaKnown RBP9.36□□□□□ -0.91
AP001554.1-201ENST00000604533 SLC4A10Q6U841 1118 aa9.36□□□□□ -0.91
AP001554.1-201ENST00000604533 REM2Q8IYK8 340 aaPredicted RBP9.36□□□□□ -0.91
AP001554.1-201ENST00000604533 TBC1D16Q8TBP0 767 aa9.36□□□□□ -0.91
AP001554.1-201ENST00000604533 PLA2G12BQ9BX93 195 aa9.36□□□□□ -0.91
AP001554.1-201ENST00000604533 ZC3H12CQ9C0D7 883 aaKnown RBP9.36□□□□□ -0.91
AP001554.1-201ENST00000604533 USP44Q9H0E7 712 aa9.36□□□□□ -0.91
AP001554.1-201ENST00000604533 SEC31BQ9NQW1 1179 aa9.36□□□□□ -0.91
AP001554.1-201ENST00000604533 UTYO14607 1347 aa9.35□□□□□ -0.91
AP001554.1-201ENST00000604533 LRRC37AA6NMS7 1700 aa9.35□□□□□ -0.91
AP001554.1-201ENST00000604533 VIL1P09327 827 aaKnown RBP9.35□□□□□ -0.91
AP001554.1-201ENST00000604533 NBPF7P0C2Y1 421 aaPredicted RBP9.35□□□□□ -0.91
AP001554.1-201ENST00000604533 RPS8P62241 208 aaKnown RBP9.35□□□□□ -0.91
AP001554.1-201ENST00000604533 SCARF1Q14162 830 aa9.35□□□□□ -0.91
AP001554.1-201ENST00000604533 ANGEL2Q5VTE6 544 aaKnown RBP9.35□□□□□ -0.91
AP001554.1-201ENST00000604533 UBE3BQ7Z3V4 1068 aa9.35□□□□□ -0.91
AP001554.1-201ENST00000604533 RASAL3Q86YV0 1011 aa9.35□□□□□ -0.91
AP001554.1-201ENST00000604533 SRCIN1Q9C0H9 1055 aa9.35□□□□□ -0.91
AP001554.1-201ENST00000604533 HDAC9Q9UKV0 1011 aa9.35□□□□□ -0.91
AP001554.1-201ENST00000604533 HPS5Q9UPZ3 1129 aa9.35□□□□□ -0.91
AP001554.1-201ENST00000604533 POLR2AP24928 1970 aaKnown RBP9.35□□□□□ -0.91
AP001554.1-201ENST00000604533 FKBP1BP68106 108 aa9.34□□□□□ -0.91
AP001554.1-201ENST00000604533 ANKIB1Q9P2G1 1089 aa9.34□□□□□ -0.91
AP001554.1-201ENST00000604533 AKAP11Q9UKA4 1901 aa9.34□□□□□ -0.91
AP001554.1-201ENST00000604533 TNRC18O15417 2968 aaPredicted RBP9.33□□□□□ -0.92
AP001554.1-201ENST00000604533 GRM8O00222 908 aa9.33□□□□□ -0.92
AP001554.1-201ENST00000604533 UFL1O94874 794 aa9.33□□□□□ -0.92
AP001554.1-201ENST00000604533 TBC1D8O95759 1140 aa9.33□□□□□ -0.92
AP001554.1-201ENST00000604533 TRIM27P14373 513 aa9.33□□□□□ -0.92
AP001554.1-201ENST00000604533 ZNF280AP59817 542 aaPredicted RBP9.33□□□□□ -0.92
AP001554.1-201ENST00000604533 PKN2Q16513 984 aaKnown RBP9.33□□□□□ -0.92
AP001554.1-201ENST00000604533 INTS3Q68E01 1043 aaKnown RBP9.33□□□□□ -0.92
AP001554.1-201ENST00000604533 RSBN1LQ6PCB5 846 aaPredicted RBP9.33□□□□□ -0.92
AP001554.1-201ENST00000604533 ATF7IPQ6VMQ6 1270 aa9.33□□□□□ -0.92
AP001554.1-201ENST00000604533 MOB2Q70IA6 237 aa9.33□□□□□ -0.92
AP001554.1-201ENST00000604533 AGBL3Q8NEM8 1001 aa9.33□□□□□ -0.92
AP001554.1-201ENST00000604533 ZNF296Q8WUU4 475 aaPredicted RBP9.33□□□□□ -0.92
AP001554.1-201ENST00000604533 SUCLG2Q96I99 432 aa9.33□□□□□ -0.92
AP001554.1-201ENST00000604533 CCDC85AQ96PX6 553 aaPredicted RBP9.33□□□□□ -0.92
AP001554.1-201ENST00000604533 API5Q9BZZ5 524 aaKnown RBP9.33□□□□□ -0.92
AP001554.1-201ENST00000604533 GREM2Q9H772 168 aa9.33□□□□□ -0.92
AP001554.1-201ENST00000604533 COL4A1P02462 1669 aa9.32□□□□□ -0.92
AP001554.1-201ENST00000604533 DDX60Q8IY21 1712 aaKnown RBP9.32□□□□□ -0.92
AP001554.1-201ENST00000604533 UBE2Q2LH0YL09 131 aa9.32□□□□□ -0.92
AP001554.1-201ENST00000604533 USP17L8P0C7I0 530 aa9.32□□□□□ -0.92
AP001554.1-201ENST00000604533 CTSWP56202 376 aa9.32□□□□□ -0.92
AP001554.1-201ENST00000604533 TTLL12Q14166 644 aaPredicted RBP9.32□□□□□ -0.92
AP001554.1-201ENST00000604533 MYOZ2Q9NPC6 264 aa9.32□□□□□ -0.92
AP001554.1-201ENST00000604533 PODXL2Q9NZ53 605 aa9.32□□□□□ -0.92
AP001554.1-201ENST00000604533 GGA1Q9UJY5 639 aa9.32□□□□□ -0.92
AP001554.1-201ENST00000604533 SCAF8Q9UPN6 1271 aaKnown RBP9.32□□□□□ -0.92
AP001554.1-201ENST00000604533 WTIPA6NIX2 430 aaPredicted RBP9.31□□□□□ -0.92
AP001554.1-201ENST00000604533 IPO8O15397 1037 aaKnown RBP9.31□□□□□ -0.92
AP001554.1-201ENST00000604533 RLBP1P12271 317 aa9.31□□□□□ -0.92
AP001554.1-201ENST00000604533 HSP90B1P14625 803 aaKnown RBP9.31□□□□□ -0.92
AP001554.1-201ENST00000604533 CCT4P50991 539 aaKnown RBP9.31□□□□□ -0.92
AP001554.1-201ENST00000604533 CCDC152Q4G0S7 254 aa9.31□□□□□ -0.92
AP001554.1-201ENST00000604533 PRAMEF18Q5VWM3 479 aa9.31□□□□□ -0.92
AP001554.1-201ENST00000604533 LMBR1LQ6UX01 489 aa9.31□□□□□ -0.92
AP001554.1-201ENST00000604533 ANKRD44Q8N8A2 993 aa9.31□□□□□ -0.92
AP001554.1-201ENST00000604533 FRAT1Q92837 279 aaPredicted RBP9.31□□□□□ -0.92
AP001554.1-201ENST00000604533 C9orf78Q9NZ63 289 aaPredicted RBP9.31□□□□□ -0.92
AP001554.1-201ENST00000604533 PITPNM2Q9BZ72 1349 aa9.31□□□□□ -0.92
AP001554.1-201ENST00000604533 SCN9AQ15858 1988 aa9.3□□□□□ -0.92
AP001554.1-201ENST00000604533 GPR25O00155 361 aa9.3□□□□□ -0.92
AP001554.1-201ENST00000604533 MKRN3Q13064 507 aaKnown RBP9.3□□□□□ -0.92
AP001554.1-201ENST00000604533 RABL6Q3YEC7 729 aaPredicted RBP9.3□□□□□ -0.92
AP001554.1-201ENST00000604533 ZKSCAN2Q63HK3 967 aa9.3□□□□□ -0.92
AP001554.1-201ENST00000604533 TMEM57Q8N5G2 664 aa9.3□□□□□ -0.92
AP001554.1-201ENST00000604533 CLUAP1Q96AJ1 413 aa9.3□□□□□ -0.92
AP001554.1-201ENST00000604533 YTHDC1Q96MU7 727 aaKnown RBP9.3□□□□□ -0.92
AP001554.1-201ENST00000604533 GMLQ99445 158 aa9.3□□□□□ -0.92
AP001554.1-201ENST00000604533 CACNA1FO60840 1977 aa9.3□□□□□ -0.92
AP001554.1-201ENST00000604533 PAPPA2Q9BXP8 1791 aa9.29□□□□□ -0.92
AP001554.1-201ENST00000604533 USP17L3A6NCW0 530 aa9.29□□□□□ -0.92
AP001554.1-201ENST00000604533 USP17L4A6NCW7 530 aa9.29□□□□□ -0.92
AP001554.1-201ENST00000604533 ITGA6P23229 1130 aa9.29□□□□□ -0.92
AP001554.1-201ENST00000604533 TM4SF4P48230 202 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms