RNA–Protein interactions for RNA: ENST00000604423.1

SRGAP2-211, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-211ENST00000604423 SNIP1Q8TAD8 396 aaKnown RBP7.61□□□□□ -1.19
SRGAP2-211ENST00000604423 RTF1Q92541 710 aaKnown RBP7.61□□□□□ -1.19
SRGAP2-211ENST00000604423 MEIS3Q99687 375 aa7.61□□□□□ -1.19
SRGAP2-211ENST00000604423 TRIM34Q9BYJ4 488 aa7.61□□□□□ -1.19
SRGAP2-211ENST00000604423 LRRCC1Q9C099 1032 aa7.61□□□□□ -1.19
SRGAP2-211ENST00000604423 TNMDQ9H2S6 317 aa7.61□□□□□ -1.19
SRGAP2-211ENST00000604423 TLL2Q9Y6L7 1015 aa7.61□□□□□ -1.19
SRGAP2-211ENST00000604423 RPGRIP1LQ68CZ1 1315 aa7.6□□□□□ -1.19
SRGAP2-211ENST00000604423 ABCC3O15438 1527 aa7.6□□□□□ -1.19
SRGAP2-211ENST00000604423 MAP2P11137 1827 aaKnown RBP7.6□□□□□ -1.19
SRGAP2-211ENST00000604423 VPS37CA5D8V6 355 aaPredicted RBP7.6□□□□□ -1.19
SRGAP2-211ENST00000604423 GOLGA6L19H0YKK7 550 aa7.6□□□□□ -1.19
SRGAP2-211ENST00000604423 NEMFO60524 1076 aa7.6□□□□□ -1.19
SRGAP2-211ENST00000604423 ZNF853P0CG23 659 aa7.6□□□□□ -1.19
SRGAP2-211ENST00000604423 TNNT3P45378 269 aaPredicted RBP7.6□□□□□ -1.19
SRGAP2-211ENST00000604423 ZNF75DP51815 510 aa7.6□□□□□ -1.19
SRGAP2-211ENST00000604423 KRT85P78386 507 aa7.6□□□□□ -1.19
SRGAP2-211ENST00000604423 IRX3P78415 501 aaPredicted RBP7.6□□□□□ -1.19
SRGAP2-211ENST00000604423 DNM1Q05193 864 aaKnown RBP7.6□□□□□ -1.19
SRGAP2-211ENST00000604423 CPSF1Q10570 1443 aaKnown RBP7.6□□□□□ -1.19
SRGAP2-211ENST00000604423 BMS1Q14692 1282 aaKnown RBP7.6□□□□□ -1.19
SRGAP2-211ENST00000604423 NAA30Q147X3 362 aaPredicted RBP7.6□□□□□ -1.19
SRGAP2-211ENST00000604423 ELF2Q15723 593 aa7.6□□□□□ -1.19
SRGAP2-211ENST00000604423 ANO6Q4KMQ2 910 aa7.6□□□□□ -1.19
SRGAP2-211ENST00000604423 TSHZ3Q63HK5 1081 aa7.6□□□□□ -1.19
SRGAP2-211ENST00000604423 LRRN4Q8WUT4 740 aa7.6□□□□□ -1.19
SRGAP2-211ENST00000604423 LIMCH1Q9UPQ0 1083 aa7.6□□□□□ -1.19
SRGAP2-211ENST00000604423 RAD50Q92878 1312 aa7.6□□□□□ -1.19
SRGAP2-211ENST00000604423 LMTK2Q8IWU2 1503 aa7.6□□□□□ -1.19
SRGAP2-211ENST00000604423 KIF2AO00139 706 aaPredicted RBP7.59□□□□□ -1.19
SRGAP2-211ENST00000604423 SLU7O95391 586 aaKnown RBP7.59□□□□□ -1.19
SRGAP2-211ENST00000604423 SMPD1P17405 629 aa7.59□□□□□ -1.19
SRGAP2-211ENST00000604423 AGERQ15109 404 aa7.59□□□□□ -1.19
SRGAP2-211ENST00000604423 FBXO38Q6PIJ6 1188 aa7.59□□□□□ -1.19
SRGAP2-211ENST00000604423 PLA2G4DQ86XP0 818 aa7.59□□□□□ -1.19
SRGAP2-211ENST00000604423 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.59□□□□□ -1.19
SRGAP2-211ENST00000604423 ZNF215Q9UL58 517 aaPredicted RBP7.59□□□□□ -1.19
SRGAP2-211ENST00000604423 CHMP3Q9Y3E7 222 aa7.59□□□□□ -1.19
SRGAP2-211ENST00000604423 MRVI1Q9Y6F6 885 aa7.59□□□□□ -1.19
SRGAP2-211ENST00000604423 V9GYY5 206 aaPredicted RBP7.59□□□□□ -1.19
SRGAP2-211ENST00000604423 TULP2O00295 520 aa7.59□□□□□ -1.19
SRGAP2-211ENST00000604423 AP1G2O75843 785 aa7.59□□□□□ -1.19
SRGAP2-211ENST00000604423 GJB2P29033 226 aa7.59□□□□□ -1.19
SRGAP2-211ENST00000604423 CDC25BP30305 580 aa7.59□□□□□ -1.19
SRGAP2-211ENST00000604423 HSPA4P34932 840 aa7.59□□□□□ -1.19
SRGAP2-211ENST00000604423 AK2P54819 239 aa7.59□□□□□ -1.19
SRGAP2-211ENST00000604423 CAMK4Q16566 473 aa7.59□□□□□ -1.19
SRGAP2-211ENST00000604423 IL17RAQ96F46 866 aa7.59□□□□□ -1.19
SRGAP2-211ENST00000604423 PHACTR3Q96KR7 559 aa7.59□□□□□ -1.19
SRGAP2-211ENST00000604423 CBX8Q9HC52 389 aa7.59□□□□□ -1.19
SRGAP2-211ENST00000604423 ARGLU1Q9NWB6 273 aaPredicted RBP7.59□□□□□ -1.19
SRGAP2-211ENST00000604423 EXOC6BQ9Y2D4 811 aa7.59□□□□□ -1.19
SRGAP2-211ENST00000604423 TPM4P67936 248 aa7.58□□□□□ -1.2
SRGAP2-211ENST00000604423 TXLNBQ8N3L3 684 aa7.58□□□□□ -1.2
SRGAP2-211ENST00000604423 FOXJ1Q92949 421 aa7.58□□□□□ -1.2
SRGAP2-211ENST00000604423 AAASQ9NRG9 546 aa7.58□□□□□ -1.2
SRGAP2-211ENST00000604423 DDX19AQ9NUU7 478 aaKnown RBP7.58□□□□□ -1.2
SRGAP2-211ENST00000604423 NRBP1Q9UHY1 535 aa7.58□□□□□ -1.2
SRGAP2-211ENST00000604423 GNAI2P04899 355 aa7.57□□□□□ -1.2
SRGAP2-211ENST00000604423 CYP2C19P33261 490 aa7.57□□□□□ -1.2
SRGAP2-211ENST00000604423 CCT4P50991 539 aaKnown RBP7.57□□□□□ -1.2
SRGAP2-211ENST00000604423 SLC4A10Q6U841 1118 aa7.57□□□□□ -1.2
SRGAP2-211ENST00000604423 CCDC83Q8IWF9 413 aa7.57□□□□□ -1.2
SRGAP2-211ENST00000604423 CKAP2LQ8IYA6 745 aa7.57□□□□□ -1.2
SRGAP2-211ENST00000604423 TDRD7Q8NHU6 1098 aaKnown RBP7.57□□□□□ -1.2
SRGAP2-211ENST00000604423 HPS1Q92902 700 aa7.57□□□□□ -1.2
SRGAP2-211ENST00000604423 KIF1BPQ96EK5 621 aa7.57□□□□□ -1.2
SRGAP2-211ENST00000604423 TRERF1Q96PN7 1200 aa7.57□□□□□ -1.2
SRGAP2-211ENST00000604423 CHMP4AQ9BY43 222 aa7.57□□□□□ -1.2
SRGAP2-211ENST00000604423 DACH1Q9UI36 760 aa7.57□□□□□ -1.2
SRGAP2-211ENST00000604423 CDK12Q9NYV4 1490 aaPredicted RBP7.57□□□□□ -1.2
SRGAP2-211ENST00000604423 CAVIN2O95810 425 aa7.57□□□□□ -1.2
SRGAP2-211ENST00000604423 ZNF165P49910 485 aa7.57□□□□□ -1.2
SRGAP2-211ENST00000604423 RAD51AP2Q09MP3 1159 aa7.57□□□□□ -1.2
SRGAP2-211ENST00000604423 GPS2Q13227 327 aa7.57□□□□□ -1.2
SRGAP2-211ENST00000604423 KRT24Q2M2I5 525 aa7.57□□□□□ -1.2
SRGAP2-211ENST00000604423 CACTINQ8WUQ7 758 aaKnown RBP7.57□□□□□ -1.2
SRGAP2-211ENST00000604423 GTF3C6Q969F1 213 aa7.57□□□□□ -1.2
SRGAP2-211ENST00000604423 SH2B1Q9NRF2 756 aaPredicted RBP7.57□□□□□ -1.2
SRGAP2-211ENST00000604423 MTMR6Q9Y217 621 aa7.57□□□□□ -1.2
SRGAP2-211ENST00000604423 PREX1Q8TCU6 1659 aa7.57□□□□□ -1.2
SRGAP2-211ENST00000604423 ELP1O95163 1332 aa7.57□□□□□ -1.2
SRGAP2-211ENST00000604423 AOX1Q06278 1338 aa7.57□□□□□ -1.2
SRGAP2-211ENST00000604423 KIAA0232Q92628 1395 aa7.57□□□□□ -1.2
SRGAP2-211ENST00000604423 CD163L1Q9NR16 1453 aa7.57□□□□□ -1.2
SRGAP2-211ENST00000604423 AXIN1O15169 862 aa7.56□□□□□ -1.2
SRGAP2-211ENST00000604423 NRDCO43847 1150 aa7.56□□□□□ -1.2
SRGAP2-211ENST00000604423 CAPN2P17655 700 aa7.56□□□□□ -1.2
SRGAP2-211ENST00000604423 CASTP20810 708 aaKnown RBP7.56□□□□□ -1.2
SRGAP2-211ENST00000604423 LRRC8AQ8IWT6 810 aa7.56□□□□□ -1.2
SRGAP2-211ENST00000604423 BICD2Q8TD16 824 aa7.56□□□□□ -1.2
SRGAP2-211ENST00000604423 ZSCAN31Q96LW9 406 aaPredicted RBP7.56□□□□□ -1.2
SRGAP2-211ENST00000604423 ST7Q9NRC1 585 aa7.56□□□□□ -1.2
SRGAP2-211ENST00000604423 FAM53CQ9NYF3 392 aa7.56□□□□□ -1.2
SRGAP2-211ENST00000604423 CWC15Q9P013 229 aaKnown RBP7.56□□□□□ -1.2
SRGAP2-211ENST00000604423 STK26Q9P289 416 aa7.56□□□□□ -1.2
SRGAP2-211ENST00000604423 NEXMIFQ5QGS0 1516 aa7.56□□□□□ -1.2
SRGAP2-211ENST00000604423 CHD1O14646 1710 aa7.56□□□□□ -1.2
SRGAP2-211ENST00000604423 ITSN1Q15811 1721 aa7.56□□□□□ -1.2
SRGAP2-211ENST00000604423 CHD2O14647 1828 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms