RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 SNAP23O00161 211 aa27.46■■□□□ 1.99
PPFIA3-208ENST00000602726 BCAR3O75815 825 aa27.46■■□□□ 1.99
PPFIA3-208ENST00000602726 UBTFL1P0CB47 393 aaPredicted RBP27.46■■□□□ 1.99
PPFIA3-208ENST00000602726 SAMD7Q7Z3H4 446 aa27.46■■□□□ 1.99
PPFIA3-208ENST00000602726 AGBL3Q8NEM8 1001 aa27.46■■□□□ 1.99
PPFIA3-208ENST00000602726 ZC3H15Q8WU90 426 aaKnown RBP27.46■■□□□ 1.99
PPFIA3-208ENST00000602726 FRAT1Q92837 279 aaPredicted RBP27.46■■□□□ 1.99
PPFIA3-208ENST00000602726 TBC1D10BQ4KMP7 808 aaPredicted RBP27.45■■□□□ 1.98
PPFIA3-208ENST00000602726 FBXW7Q969H0 707 aa27.45■■□□□ 1.98
PPFIA3-208ENST00000602726 PUS3Q9BZE2 481 aaKnown RBP27.45■■□□□ 1.98
PPFIA3-208ENST00000602726 TMEM88BA6NKF7 163 aa27.44■■□□□ 1.98
PPFIA3-208ENST00000602726 RBM26Q5T8P6 1007 aaKnown RBP27.44■■□□□ 1.98
PPFIA3-208ENST00000602726 PGAP2Q9UHJ9 254 aa27.44■■□□□ 1.98
PPFIA3-208ENST00000602726 HDAC5Q9UQL6 1122 aa27.44■■□□□ 1.98
PPFIA3-208ENST00000602726 C15orf52Q6ZUT6 534 aaKnown RBP27.43■■□□□ 1.98
PPFIA3-208ENST00000602726 PSME4Q14997 1843 aa27.43■■□□□ 1.98
PPFIA3-208ENST00000602726 STRIP1Q5VSL9 837 aa27.42■■□□□ 1.98
PPFIA3-208ENST00000602726 INTS3Q68E01 1043 aaKnown RBP27.42■■□□□ 1.98
PPFIA3-208ENST00000602726 RIPOR2Q9Y4F9 1068 aa27.42■■□□□ 1.98
PPFIA3-208ENST00000602726 MROH5Q6ZUA9 1318 aa27.41■■□□□ 1.98
PPFIA3-208ENST00000602726 ZNF609O15014 1411 aa27.41■■□□□ 1.98
PPFIA3-208ENST00000602726 A0A1B0GUL6 1792 aa27.41■■□□□ 1.98
PPFIA3-208ENST00000602726 DACT2Q5SW24 774 aa27.41■■□□□ 1.98
PPFIA3-208ENST00000602726 ATF7IPQ6VMQ6 1270 aa27.41■■□□□ 1.98
PPFIA3-208ENST00000602726 GMLQ99445 158 aa27.41■■□□□ 1.98
PPFIA3-208ENST00000602726 CD209Q9NNX6 404 aa27.41■■□□□ 1.98
PPFIA3-208ENST00000602726 IRS2Q9Y4H2 1338 aa27.41■■□□□ 1.98
PPFIA3-208ENST00000602726 TRAF5O00463 557 aa27.4■■□□□ 1.98
PPFIA3-208ENST00000602726 EGFRP00533 1210 aa27.4■■□□□ 1.98
PPFIA3-208ENST00000602726 USP17L8P0C7I0 530 aa27.4■■□□□ 1.98
PPFIA3-208ENST00000602726 TRIM27P14373 513 aa27.4■■□□□ 1.98
PPFIA3-208ENST00000602726 KIF4BQ2VIQ3 1234 aa27.4■■□□□ 1.98
PPFIA3-208ENST00000602726 TTLL5Q6EMB2 1281 aa27.4■■□□□ 1.98
PPFIA3-208ENST00000602726 ZNF804AQ7Z570 1209 aa27.4■■□□□ 1.98
PPFIA3-208ENST00000602726 ZNF280AP59817 542 aaPredicted RBP27.39■■□□□ 1.98
PPFIA3-208ENST00000602726 UBE4AQ14139 1066 aa27.39■■□□□ 1.98
PPFIA3-208ENST00000602726 LRRC24Q50LG9 513 aa27.39■■□□□ 1.98
PPFIA3-208ENST00000602726 KLHDC4Q8TBB5 520 aa27.39■■□□□ 1.98
PPFIA3-208ENST00000602726 GLIS2Q9BZE0 524 aaPredicted RBP27.39■■□□□ 1.98
PPFIA3-208ENST00000602726 MYO3BQ8WXR4 1341 aa27.39■■□□□ 1.97
PPFIA3-208ENST00000602726 GTF2IP78347 998 aa27.38■■□□□ 1.97
PPFIA3-208ENST00000602726 FMR1Q06787 632 aaKnown RBP eCLIP27.38■■□□□ 1.97
PPFIA3-208ENST00000602726 METTL24Q5JXM2 366 aa27.38■■□□□ 1.97
PPFIA3-208ENST00000602726 CDC37L1Q7L3B6 337 aa27.38■■□□□ 1.97
PPFIA3-208ENST00000602726 MEIS3Q99687 375 aa27.38■■□□□ 1.97
PPFIA3-208ENST00000602726 MXD3Q9BW11 206 aa27.38■■□□□ 1.97
PPFIA3-208ENST00000602726 MKRN1Q9UHC7 482 aaKnown RBP27.38■■□□□ 1.97
PPFIA3-208ENST00000602726 ZKSCAN2Q63HK3 967 aa27.37■■□□□ 1.97
PPFIA3-208ENST00000602726 LRRFIP2Q9Y608 721 aaKnown RBP27.37■■□□□ 1.97
PPFIA3-208ENST00000602726 GNAI3P08754 354 aa27.36■■□□□ 1.97
PPFIA3-208ENST00000602726 OGFOD1Q8N543 542 aa27.36■■□□□ 1.97
PPFIA3-208ENST00000602726 CLUAP1Q96AJ1 413 aa27.36■■□□□ 1.97
PPFIA3-208ENST00000602726 MYOZ2Q9NPC6 264 aa27.36■■□□□ 1.97
PPFIA3-208ENST00000602726 TNNQ9UQP3 1299 aa27.36■■□□□ 1.97
PPFIA3-208ENST00000602726 IL1R1P14778 569 aa27.35■■□□□ 1.97
PPFIA3-208ENST00000602726 RFX5P48382 616 aaPredicted RBP27.35■■□□□ 1.97
PPFIA3-208ENST00000602726 JMYQ8N9B5 988 aa27.35■■□□□ 1.97
PPFIA3-208ENST00000602726 DCPSQ96C86 337 aaKnown RBP27.35■■□□□ 1.97
PPFIA3-208ENST00000602726 ABT1Q9ULW3 272 aaKnown RBP27.35■■□□□ 1.97
PPFIA3-208ENST00000602726 USP48Q86UV5 1035 aa27.34■■□□□ 1.97
PPFIA3-208ENST00000602726 PDE8BO95263 885 aa27.33■■□□□ 1.97
PPFIA3-208ENST00000602726 PTPN12Q05209 780 aaKnown RBP27.33■■□□□ 1.97
PPFIA3-208ENST00000602726 KRT26Q7Z3Y9 468 aa27.33■■□□□ 1.97
PPFIA3-208ENST00000602726 CNTNAP1P78357 1384 aa27.33■■□□□ 1.97
PPFIA3-208ENST00000602726 TRPM7Q96QT4 1865 aa27.32■■□□□ 1.96
PPFIA3-208ENST00000602726 EYA2O00167 538 aa27.32■■□□□ 1.96
PPFIA3-208ENST00000602726 SCARF1Q14162 830 aa27.32■■□□□ 1.96
PPFIA3-208ENST00000602726 CST9Q5W186 159 aa27.32■■□□□ 1.96
PPFIA3-208ENST00000602726 CELF2O95319 508 aaKnown RBP27.31■■□□□ 1.96
PPFIA3-208ENST00000602726 HIBADHP31937 336 aaKnown RBP27.31■■□□□ 1.96
PPFIA3-208ENST00000602726 GYG1P46976 350 aa27.31■■□□□ 1.96
PPFIA3-208ENST00000602726 MMP14P50281 582 aa27.31■■□□□ 1.96
PPFIA3-208ENST00000602726 GGA3Q9NZ52 723 aa27.31■■□□□ 1.96
PPFIA3-208ENST00000602726 ZNF646O15015 1829 aaPredicted RBP27.3■■□□□ 1.96
PPFIA3-208ENST00000602726 DEFB115Q30KQ5 88 aa27.3■■□□□ 1.96
PPFIA3-208ENST00000602726 KIAA0825Q8IV33 1275 aa27.3■■□□□ 1.96
PPFIA3-208ENST00000602726 VGLL2Q8N8G2 317 aa27.3■■□□□ 1.96
PPFIA3-208ENST00000602726 FAM84BQ96KN1 310 aaPredicted RBP27.3■■□□□ 1.96
PPFIA3-208ENST00000602726 ZNF408Q9H9D4 720 aa27.3■■□□□ 1.96
PPFIA3-208ENST00000602726 HDAC9Q9UKV0 1011 aa27.3■■□□□ 1.96
PPFIA3-208ENST00000602726 POLR2AP24928 1970 aaKnown RBP27.29■■□□□ 1.96
PPFIA3-208ENST00000602726 VPS37DQ86XT2 251 aa27.29■■□□□ 1.96
PPFIA3-208ENST00000602726 SULF1Q8IWU6 871 aa27.29■■□□□ 1.96
PPFIA3-208ENST00000602726 TMEM57Q8N5G2 664 aa27.29■■□□□ 1.96
PPFIA3-208ENST00000602726 SIL1Q9H173 461 aa27.29■■□□□ 1.96
PPFIA3-208ENST00000602726 FBXO3Q9UK99 471 aa27.29■■□□□ 1.96
PPFIA3-208ENST00000602726 ASTN2O75129 1339 aaPredicted RBP27.29■■□□□ 1.96
PPFIA3-208ENST00000602726 RASSF10A6NK89 507 aa27.28■■□□□ 1.96
PPFIA3-208ENST00000602726 SASH1O94885 1247 aa27.28■■□□□ 1.96
PPFIA3-208ENST00000602726 PUM3Q15397 648 aaKnown RBP27.28■■□□□ 1.96
PPFIA3-208ENST00000602726 CAVIN4Q5BKX8 364 aa27.28■■□□□ 1.96
PPFIA3-208ENST00000602726 ANGEL2Q5VTE6 544 aaKnown RBP27.28■■□□□ 1.96
PPFIA3-208ENST00000602726 FTSJ3Q8IY81 847 aaKnown RBP27.28■■□□□ 1.96
PPFIA3-208ENST00000602726 JAG2Q9Y219 1238 aa27.28■■□□□ 1.96
PPFIA3-208ENST00000602726 ADM5C9JUS6 153 aa27.27■■□□□ 1.96
PPFIA3-208ENST00000602726 TDRD7Q8NHU6 1098 aaKnown RBP27.27■■□□□ 1.96
PPFIA3-208ENST00000602726 PCNTO95613 3336 aa27.27■■□□□ 1.96
PPFIA3-208ENST00000602726 CIAO1O76071 339 aa27.26■■□□□ 1.95
PPFIA3-208ENST00000602726 GNAI2P04899 355 aa27.26■■□□□ 1.95
PPFIA3-208ENST00000602726 VEGFBP49765 207 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms