RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 TBC1D7Q9P0N9 293 aa10.16□□□□□ -0.78
COMMD3-215ENST00000602574 BIN2Q9UBW5 565 aaPredicted RBP10.16□□□□□ -0.78
COMMD3-215ENST00000602574 IQSEC3Q9UPP2 1182 aaPredicted RBP10.16□□□□□ -0.78
COMMD3-215ENST00000602574 PCDHGC5Q9Y5F6 944 aa10.16□□□□□ -0.78
COMMD3-215ENST00000602574 EVC2Q86UK5 1308 aa10.16□□□□□ -0.78
COMMD3-215ENST00000602574 RAPGEF6Q8TEU7 1601 aa10.16□□□□□ -0.78
COMMD3-215ENST00000602574 LRRC10BA6NIK2 292 aa10.16□□□□□ -0.78
COMMD3-215ENST00000602574 MAP2K7O14733 419 aa10.16□□□□□ -0.78
COMMD3-215ENST00000602574 SRGAP3O43295 1099 aa10.16□□□□□ -0.78
COMMD3-215ENST00000602574 ATP6V1G1O75348 118 aa10.16□□□□□ -0.78
COMMD3-215ENST00000602574 U2AF1L5P0DN76 240 aaPredicted RBP10.16□□□□□ -0.78
COMMD3-215ENST00000602574 KCNA2P16389 499 aa10.16□□□□□ -0.78
COMMD3-215ENST00000602574 U2AF1Q01081 240 aaKnown RBP eCLIP10.16□□□□□ -0.78
COMMD3-215ENST00000602574 CCDC92Q53HC0 331 aaPredicted RBP10.16□□□□□ -0.78
COMMD3-215ENST00000602574 FBXW10Q5XX13 1052 aa10.16□□□□□ -0.78
COMMD3-215ENST00000602574 KIAA0825Q8IV33 1275 aa10.16□□□□□ -0.78
COMMD3-215ENST00000602574 GBP7Q8N8V2 638 aaPredicted RBP10.16□□□□□ -0.78
COMMD3-215ENST00000602574 CCDC150Q8NCX0 1101 aa10.16□□□□□ -0.78
COMMD3-215ENST00000602574 TRIM4Q9C037 500 aa10.16□□□□□ -0.78
COMMD3-215ENST00000602574 DNAAF2Q9NVR5 837 aaKnown RBP10.16□□□□□ -0.78
COMMD3-215ENST00000602574 RABL2BQ9UNT1 228 aa10.16□□□□□ -0.78
COMMD3-215ENST00000602574 PDZRN3Q9UPQ7 1066 aa10.16□□□□□ -0.78
COMMD3-215ENST00000602574 SASH3O75995 380 aa10.15□□□□□ -0.78
COMMD3-215ENST00000602574 FNTAP49354 379 aa10.15□□□□□ -0.78
COMMD3-215ENST00000602574 ERCC6LQ2NKX8 1250 aa10.15□□□□□ -0.78
COMMD3-215ENST00000602574 CCDC183Q5T5S1 534 aa10.15□□□□□ -0.78
COMMD3-215ENST00000602574 SLC35B4Q969S0 331 aa10.15□□□□□ -0.78
COMMD3-215ENST00000602574 FUT8Q9BYC5 575 aa10.15□□□□□ -0.78
COMMD3-215ENST00000602574 PHACTR1Q9C0D0 580 aa10.15□□□□□ -0.78
COMMD3-215ENST00000602574 TMEM165Q9HC07 324 aa10.15□□□□□ -0.78
COMMD3-215ENST00000602574 PUF60Q9UHX1 559 aaKnown RBP10.15□□□□□ -0.78
COMMD3-215ENST00000602574 CORO1CQ9ULV4 474 aaPredicted RBP10.15□□□□□ -0.78
COMMD3-215ENST00000602574 ZNF510Q9Y2H8 683 aa10.15□□□□□ -0.78
COMMD3-215ENST00000602574 CTDP1Q9Y5B0 961 aaPredicted RBP10.15□□□□□ -0.78
COMMD3-215ENST00000602574 SYNMO15061 1565 aa10.14□□□□□ -0.79
COMMD3-215ENST00000602574 GOLGA6L9A6NEM1 432 aa10.14□□□□□ -0.79
COMMD3-215ENST00000602574 MYO1BO43795 1136 aa10.14□□□□□ -0.79
COMMD3-215ENST00000602574 CAPN15O75808 1086 aa10.14□□□□□ -0.79
COMMD3-215ENST00000602574 VIL1P09327 827 aaKnown RBP10.14□□□□□ -0.79
COMMD3-215ENST00000602574 INPP5BP32019 993 aa10.14□□□□□ -0.79
COMMD3-215ENST00000602574 GNAI1P63096 354 aa10.14□□□□□ -0.79
COMMD3-215ENST00000602574 CCDC57Q2TAC2 916 aa10.14□□□□□ -0.79
COMMD3-215ENST00000602574 ARMC9Q7Z3E5 817 aa10.14□□□□□ -0.79
COMMD3-215ENST00000602574 TRMT2AQ8IZ69 625 aaKnown RBP10.14□□□□□ -0.79
COMMD3-215ENST00000602574 ATP11CQ8NB49 1132 aa10.14□□□□□ -0.79
COMMD3-215ENST00000602574 LZICQ8WZA0 190 aa10.14□□□□□ -0.79
COMMD3-215ENST00000602574 RSRC1Q96IZ7 334 aaKnown RBP10.14□□□□□ -0.79
COMMD3-215ENST00000602574 ZCCHC17Q9NP64 241 aaKnown RBP10.14□□□□□ -0.79
COMMD3-215ENST00000602574 GMEB1Q9Y692 573 aa10.14□□□□□ -0.79
COMMD3-215ENST00000602574 ADAMTS12P58397 1594 aa10.14□□□□□ -0.79
COMMD3-215ENST00000602574 ANKRD50Q9ULJ7 1429 aa10.14□□□□□ -0.79
COMMD3-215ENST00000602574 CDC25BP30305 580 aa10.14□□□□□ -0.79
COMMD3-215ENST00000602574 LIG3P49916 1009 aa10.14□□□□□ -0.79
COMMD3-215ENST00000602574 PAPOLAP51003 745 aaKnown RBP10.14□□□□□ -0.79
COMMD3-215ENST00000602574 KCNB1Q14721 858 aa10.14□□□□□ -0.79
COMMD3-215ENST00000602574 ZSCAN25Q6NSZ9 544 aa10.14□□□□□ -0.79
COMMD3-215ENST00000602574 CCDC65Q8IXS2 484 aa10.14□□□□□ -0.79
COMMD3-215ENST00000602574 NUP133Q8WUM0 1156 aa10.14□□□□□ -0.79
COMMD3-215ENST00000602574 GORASP1Q9BQQ3 440 aa10.14□□□□□ -0.79
COMMD3-215ENST00000602574 G3BP2Q9UN86 482 aaKnown RBP10.14□□□□□ -0.79
COMMD3-215ENST00000602574 ITM2BQ9Y287 266 aa10.14□□□□□ -0.79
COMMD3-215ENST00000602574 NKTRP30414 1462 aaKnown RBP10.13□□□□□ -0.79
COMMD3-215ENST00000602574 ZNF521Q96K83 1311 aa10.13□□□□□ -0.79
COMMD3-215ENST00000602574 TMEM221A6NGB7 291 aa10.13□□□□□ -0.79
COMMD3-215ENST00000602574 EFCAB8A8MWE9 144 aa10.13□□□□□ -0.79
COMMD3-215ENST00000602574 RNF8O76064 485 aa10.13□□□□□ -0.79
COMMD3-215ENST00000602574 SLC4A2P04920 1241 aa10.13□□□□□ -0.79
COMMD3-215ENST00000602574 CHGAP10645 457 aaKnown RBP10.13□□□□□ -0.79
COMMD3-215ENST00000602574 NAT2P11245 290 aa10.13□□□□□ -0.79
COMMD3-215ENST00000602574 PTGS1P23219 599 aa10.13□□□□□ -0.79
COMMD3-215ENST00000602574 SLC8A1P32418 973 aa10.13□□□□□ -0.79
COMMD3-215ENST00000602574 MAGEA10P43363 369 aaPredicted RBP10.13□□□□□ -0.79
COMMD3-215ENST00000602574 NAA25Q14CX7 972 aa10.13□□□□□ -0.79
COMMD3-215ENST00000602574 E2F5Q15329 346 aa10.13□□□□□ -0.79
COMMD3-215ENST00000602574 Q4G0T1 1027 aa10.13□□□□□ -0.79
COMMD3-215ENST00000602574 CAPRIN2Q6IMN6 1127 aaKnown RBP10.13□□□□□ -0.79
COMMD3-215ENST00000602574 RNF168Q8IYW5 571 aaPredicted RBP10.13□□□□□ -0.79
COMMD3-215ENST00000602574 CUL5Q93034 780 aa10.13□□□□□ -0.79
COMMD3-215ENST00000602574 CARD11Q9BXL7 1154 aa10.13□□□□□ -0.79
COMMD3-215ENST00000602574 ARFGAP3Q9NP61 516 aa10.13□□□□□ -0.79
COMMD3-215ENST00000602574 PNMA2Q9UL42 364 aa10.13□□□□□ -0.79
COMMD3-215ENST00000602574 TPX2Q9ULW0 747 aaKnown RBP10.13□□□□□ -0.79
COMMD3-215ENST00000602574 RNF17Q9BXT8 1623 aaKnown RBP10.13□□□□□ -0.79
COMMD3-215ENST00000602574 KIAA0586Q9BVV6 1533 aa10.13□□□□□ -0.79
COMMD3-215ENST00000602574 FAM135AQ9P2D6 1515 aa10.13□□□□□ -0.79
COMMD3-215ENST00000602574 CEP104O60308 925 aa10.13□□□□□ -0.79
COMMD3-215ENST00000602574 MMEP08473 750 aa10.13□□□□□ -0.79
COMMD3-215ENST00000602574 USP4Q13107 963 aa10.13□□□□□ -0.79
COMMD3-215ENST00000602574 MIS18BP1Q6P0N0 1132 aa10.13□□□□□ -0.79
COMMD3-215ENST00000602574 SEPT14Q6ZU15 432 aa10.13□□□□□ -0.79
COMMD3-215ENST00000602574 FAM71BQ8TC56 605 aa10.13□□□□□ -0.79
COMMD3-215ENST00000602574 UBXN4Q92575 508 aa10.13□□□□□ -0.79
COMMD3-215ENST00000602574 MAK16Q9BXY0 300 aaKnown RBP10.13□□□□□ -0.79
COMMD3-215ENST00000602574 BRD8Q9H0E9 1235 aa10.13□□□□□ -0.79
COMMD3-215ENST00000602574 TUBA8Q9NY65 449 aaPredicted RBP10.13□□□□□ -0.79
COMMD3-215ENST00000602574 CHIC2Q9UKJ5 165 aa10.13□□□□□ -0.79
COMMD3-215ENST00000602574 MRFAP1Q9Y605 127 aa10.13□□□□□ -0.79
COMMD3-215ENST00000602574 ARHGEF5Q12774 1597 aa10.13□□□□□ -0.79
COMMD3-215ENST00000602574 ABCC10Q5T3U5 1492 aa10.13□□□□□ -0.79
COMMD3-215ENST00000602574 PSMD7P51665 324 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms