RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	ARHGAP45	Q92619	1136 aa		19.48	■□□□□ 0.71
PLD3-223	ENST00000600948	PGAP2	Q9UHJ9	254 aa		19.48	■□□□□ 0.71
PLD3-223	ENST00000600948	ZBED9	Q6R2W3	1325 aa		19.48	■□□□□ 0.71
PLD3-223	ENST00000600948	USP17L3	A6NCW0	530 aa		19.47	■□□□□ 0.71
PLD3-223	ENST00000600948	USP17L4	A6NCW7	530 aa		19.47	■□□□□ 0.71
PLD3-223	ENST00000600948	C15orf52	Q6ZUT6	534 aa	Known RBP	19.47	■□□□□ 0.71
PLD3-223	ENST00000600948	USP17L1	Q7RTZ2	530 aa		19.47	■□□□□ 0.71
PLD3-223	ENST00000600948	AGBL3	Q8NEM8	1001 aa		19.47	■□□□□ 0.71
PLD3-223	ENST00000600948	GML	Q99445	158 aa		19.47	■□□□□ 0.71
PLD3-223	ENST00000600948	PUS3	Q9BZE2	481 aa	Known RBP	19.47	■□□□□ 0.71
PLD3-223	ENST00000600948	CNNM1	Q9NRU3	951 aa		19.47	■□□□□ 0.71
PLD3-223	ENST00000600948	TMEM88B	A6NKF7	163 aa		19.46	■□□□□ 0.71
PLD3-223	ENST00000600948	EGFR	P00533	1210 aa		19.46	■□□□□ 0.71
PLD3-223	ENST00000600948	SAMD7	Q7Z3H4	446 aa		19.46	■□□□□ 0.71
PLD3-223	ENST00000600948	ZC3H15	Q8WU90	426 aa	Known RBP	19.46	■□□□□ 0.71
PLD3-223	ENST00000600948	BCAR3	O75815	825 aa		19.45	■□□□□ 0.7
PLD3-223	ENST00000600948	FMR1	Q06787	632 aa	Known RBP eCLIP	19.45	■□□□□ 0.7
PLD3-223	ENST00000600948	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	19.45	■□□□□ 0.7
PLD3-223	ENST00000600948	DACT2	Q5SW24	774 aa		19.45	■□□□□ 0.7
PLD3-223	ENST00000600948	JMY	Q8N9B5	988 aa		19.45	■□□□□ 0.7
PLD3-223	ENST00000600948	RIPOR2	Q9Y4F9	1068 aa		19.45	■□□□□ 0.7
PLD3-223	ENST00000600948	TRAF5	O00463	557 aa		19.44	■□□□□ 0.7
PLD3-223	ENST00000600948	PLIN1	O60240	522 aa		19.44	■□□□□ 0.7
PLD3-223	ENST00000600948	ZNF280A	P59817	542 aa	Predicted RBP	19.44	■□□□□ 0.7
PLD3-223	ENST00000600948	UBTFL1	P0CB47	393 aa	Predicted RBP	19.43	■□□□□ 0.7
PLD3-223	ENST00000600948	KIF4B	Q2VIQ3	1234 aa		19.43	■□□□□ 0.7
PLD3-223	ENST00000600948	STRIP1	Q5VSL9	837 aa		19.43	■□□□□ 0.7
PLD3-223	ENST00000600948	INTS3	Q68E01	1043 aa	Known RBP	19.43	■□□□□ 0.7
PLD3-223	ENST00000600948	CD209	Q9NNX6	404 aa		19.43	■□□□□ 0.7
PLD3-223	ENST00000600948	IPO8	O15397	1037 aa	Known RBP	19.42	■□□□□ 0.7
PLD3-223	ENST00000600948	TRIM27	P14373	513 aa		19.42	■□□□□ 0.7
PLD3-223	ENST00000600948	LRRC24	Q50LG9	513 aa		19.42	■□□□□ 0.7
PLD3-223	ENST00000600948	RBM26	Q5T8P6	1007 aa	Known RBP	19.42	■□□□□ 0.7
PLD3-223	ENST00000600948	MXD3	Q9BW11	206 aa		19.42	■□□□□ 0.7
PLD3-223	ENST00000600948	GLIS2	Q9BZE0	524 aa	Predicted RBP	19.42	■□□□□ 0.7
PLD3-223	ENST00000600948	TNN	Q9UQP3	1299 aa		19.42	■□□□□ 0.7
PLD3-223	ENST00000600948	USP17L8	P0C7I0	530 aa		19.41	■□□□□ 0.7
PLD3-223	ENST00000600948	RFX5	P48382	616 aa	Predicted RBP	19.41	■□□□□ 0.7
PLD3-223	ENST00000600948	UBE4A	Q14139	1066 aa		19.41	■□□□□ 0.7
PLD3-223	ENST00000600948	ATF7IP	Q6VMQ6	1270 aa		19.41	■□□□□ 0.7
PLD3-223	ENST00000600948	KLHDC4	Q8TBB5	520 aa		19.41	■□□□□ 0.7
PLD3-223	ENST00000600948	FRAT1	Q92837	279 aa	Predicted RBP	19.41	■□□□□ 0.7
PLD3-223	ENST00000600948	FBXW7	Q969H0	707 aa		19.41	■□□□□ 0.7
PLD3-223	ENST00000600948	MEIS3	Q99687	375 aa		19.41	■□□□□ 0.7
PLD3-223	ENST00000600948	MKRN1	Q9UHC7	482 aa	Known RBP	19.41	■□□□□ 0.7
PLD3-223	ENST00000600948	MROH5	Q6ZUA9	1318 aa		19.41	■□□□□ 0.7
PLD3-223	ENST00000600948	CNTNAP1	P78357	1384 aa		19.41	■□□□□ 0.7
PLD3-223	ENST00000600948	GTF2I	P78347	998 aa		19.4	■□□□□ 0.7
PLD3-223	ENST00000600948	TTLL5	Q6EMB2	1281 aa		19.4	■□□□□ 0.7
PLD3-223	ENST00000600948	CDC37L1	Q7L3B6	337 aa		19.4	■□□□□ 0.7
PLD3-223	ENST00000600948	ZNF804A	Q7Z570	1209 aa		19.4	■□□□□ 0.7
PLD3-223	ENST00000600948	MYO3B	Q8WXR4	1341 aa		19.4	■□□□□ 0.7
PLD3-223	ENST00000600948	IL1R1	P14778	569 aa		19.39	■□□□□ 0.69
PLD3-223	ENST00000600948	CST9	Q5W186	159 aa		19.39	■□□□□ 0.69
PLD3-223	ENST00000600948	VGLL2	Q8N8G2	317 aa		19.39	■□□□□ 0.69
PLD3-223	ENST00000600948	MYOZ2	Q9NPC6	264 aa		19.39	■□□□□ 0.69
PLD3-223	ENST00000600948	LRRFIP2	Q9Y608	721 aa	Known RBP	19.39	■□□□□ 0.69
PLD3-223	ENST00000600948	ASTN2	O75129	1339 aa	Predicted RBP	19.38	■□□□□ 0.69
PLD3-223	ENST00000600948	PTPN12	Q05209	780 aa	Known RBP	19.38	■□□□□ 0.69
PLD3-223	ENST00000600948	METTL24	Q5JXM2	366 aa		19.38	■□□□□ 0.69
PLD3-223	ENST00000600948	HDAC5	Q9UQL6	1122 aa		19.38	■□□□□ 0.69
PLD3-223	ENST00000600948	RASSF10	A6NK89	507 aa		19.37	■□□□□ 0.69
PLD3-223	ENST00000600948	USP48	Q86UV5	1035 aa		19.37	■□□□□ 0.69
PLD3-223	ENST00000600948	CLUAP1	Q96AJ1	413 aa		19.37	■□□□□ 0.69
PLD3-223	ENST00000600948	GGA3	Q9NZ52	723 aa		19.37	■□□□□ 0.69
PLD3-223	ENST00000600948	ARAP2	Q8WZ64	1704 aa		19.37	■□□□□ 0.69
PLD3-223	ENST00000600948	EYA2	O00167	538 aa		19.36	■□□□□ 0.69
PLD3-223	ENST00000600948	PDE8B	O95263	885 aa		19.36	■□□□□ 0.69
PLD3-223	ENST00000600948	CELF2	O95319	508 aa	Known RBP	19.36	■□□□□ 0.69
PLD3-223	ENST00000600948	GNAI3	P08754	354 aa		19.36	■□□□□ 0.69
PLD3-223	ENST00000600948	GYG1	P46976	350 aa		19.36	■□□□□ 0.69
PLD3-223	ENST00000600948	ZKSCAN2	Q63HK3	967 aa		19.36	■□□□□ 0.69
PLD3-223	ENST00000600948	DLK2	Q6UY11	383 aa		19.36	■□□□□ 0.69
PLD3-223	ENST00000600948	KRT26	Q7Z3Y9	468 aa		19.36	■□□□□ 0.69
PLD3-223	ENST00000600948	DCPS	Q96C86	337 aa	Known RBP	19.36	■□□□□ 0.69
PLD3-223	ENST00000600948	FAM84B	Q96KN1	310 aa	Predicted RBP	19.36	■□□□□ 0.69
PLD3-223	ENST00000600948	ABT1	Q9ULW3	272 aa	Known RBP	19.36	■□□□□ 0.69
PLD3-223	ENST00000600948	SCARF1	Q14162	830 aa		19.35	■□□□□ 0.69
PLD3-223	ENST00000600948	DEFB115	Q30KQ5	88 aa		19.35	■□□□□ 0.69
PLD3-223	ENST00000600948	OGFOD1	Q8N543	542 aa		19.35	■□□□□ 0.69
PLD3-223	ENST00000600948	CERS5	Q8N5B7	392 aa		19.35	■□□□□ 0.69
PLD3-223	ENST00000600948	ADM5	C9JUS6	153 aa		19.34	■□□□□ 0.69
PLD3-223	ENST00000600948	HIBADH	P31937	336 aa	Known RBP	19.34	■□□□□ 0.69
PLD3-223	ENST00000600948	VEGFB	P49765	207 aa		19.34	■□□□□ 0.69
PLD3-223	ENST00000600948	MMP14	P50281	582 aa		19.34	■□□□□ 0.69
PLD3-223	ENST00000600948	ANGEL2	Q5VTE6	544 aa	Known RBP	19.34	■□□□□ 0.69
PLD3-223	ENST00000600948	ATG9A	Q7Z3C6	839 aa		19.34	■□□□□ 0.69
PLD3-223	ENST00000600948	KIAA0825	Q8IV33	1275 aa		19.34	■□□□□ 0.69
PLD3-223	ENST00000600948	TMEM57	Q8N5G2	664 aa		19.34	■□□□□ 0.69
PLD3-223	ENST00000600948	TDRD7	Q8NHU6	1098 aa	Known RBP	19.34	■□□□□ 0.69
PLD3-223	ENST00000600948	TLL2	Q9Y6L7	1015 aa		19.34	■□□□□ 0.69
PLD3-223	ENST00000600948	ECM29	Q5VYK3	1845 aa		19.34	■□□□□ 0.69
PLD3-223	ENST00000600948	FAM205A	Q6ZU69	1335 aa		19.33	■□□□□ 0.69
PLD3-223	ENST00000600948	SASH1	O94885	1247 aa		19.33	■□□□□ 0.68
PLD3-223	ENST00000600948	FGFR2	P21802	821 aa		19.33	■□□□□ 0.68
PLD3-223	ENST00000600948	FKBP1A	P62942	108 aa	Known RBP	19.33	■□□□□ 0.68
PLD3-223	ENST00000600948	FBXO33	Q7Z6M2	555 aa		19.33	■□□□□ 0.68
PLD3-223	ENST00000600948	ZNF408	Q9H9D4	720 aa		19.33	■□□□□ 0.68
PLD3-223	ENST00000600948	FBXO3	Q9UK99	471 aa		19.33	■□□□□ 0.68
PLD3-223	ENST00000600948	MYH13	Q9UKX3	1938 aa		19.33	■□□□□ 0.68

Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms