RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 HOXA10P31260 410 aaPredicted RBP21.3■■□□□ 1
SHKBP1-224ENST00000600718 MCAMP43121 646 aa21.3■■□□□ 1
SHKBP1-224ENST00000600718 ZAP70P43403 619 aa21.3■■□□□ 1
SHKBP1-224ENST00000600718 LSG1Q9H089 658 aaKnown RBP21.3■■□□□ 1
SHKBP1-224ENST00000600718 TAF1P21675 1872 aa21.3■■□□□ 1
SHKBP1-224ENST00000600718 TTF1Q15361 905 aaPredicted RBP21.29■■□□□ 1
SHKBP1-224ENST00000600718 CRAMP1Q96RY5 1269 aa21.29■■□□□ 1
SHKBP1-224ENST00000600718 ANTXR1Q9H6X2 564 aa21.29■■□□□ 1
SHKBP1-224ENST00000600718 A0A0D9SFI3 127 aa21.28■■□□□ 1
SHKBP1-224ENST00000600718 NRXN2Q9P2S2 1712 aa21.28■■□□□ 1
SHKBP1-224ENST00000600718 BBOX1O75936 387 aa21.28■■□□□ 1
SHKBP1-224ENST00000600718 ANAPC15P60006 121 aa21.28■■□□□ 1
SHKBP1-224ENST00000600718 QSER1Q2KHR3 1735 aa21.28■■□□□ 1
SHKBP1-224ENST00000600718 RNF113AO15541 343 aaKnown RBP21.27■■□□□ 1
SHKBP1-224ENST00000600718 ZFYP08048 801 aaPredicted RBP21.27■■□□□ 1
SHKBP1-224ENST00000600718 DEKP35659 375 aaKnown RBP21.27■■□□□ 1
SHKBP1-224ENST00000600718 KCNJ4P48050 445 aa21.27■■□□□ 1
SHKBP1-224ENST00000600718 RABEP1Q15276 862 aa21.27■■□□□ 1
SHKBP1-224ENST00000600718 MCMDC2Q4G0Z9 681 aa21.27■■□□□ 1
SHKBP1-224ENST00000600718 MSL1Q68DK7 614 aa21.27■■□□□ 1
SHKBP1-224ENST00000600718 HELLSQ9NRZ9 838 aa21.27■■□□□ 1
SHKBP1-224ENST00000600718 BCAMP50895 628 aa21.27■□□□□ 0.99
SHKBP1-224ENST00000600718 CAVIN4Q5BKX8 364 aa21.27■□□□□ 0.99
SHKBP1-224ENST00000600718 ILDR1Q86SU0 546 aaPredicted RBP21.27■□□□□ 0.99
SHKBP1-224ENST00000600718 HMG20BQ9P0W2 317 aa21.27■□□□□ 0.99
SHKBP1-224ENST00000600718 MED23Q9ULK4 1368 aa21.26■□□□□ 0.99
SHKBP1-224ENST00000600718 HSPA4P34932 840 aa21.26■□□□□ 0.99
SHKBP1-224ENST00000600718 PDE6BP35913 854 aa21.26■□□□□ 0.99
SHKBP1-224ENST00000600718 SPATA5Q8NB90 893 aa21.26■□□□□ 0.99
SHKBP1-224ENST00000600718 SNX21Q969T3 373 aa21.26■□□□□ 0.99
SHKBP1-224ENST00000600718 GNL3LQ9NVN8 582 aaKnown RBP21.26■□□□□ 0.99
SHKBP1-224ENST00000600718 A0A1B0GUL6 1792 aa21.25■□□□□ 0.99
SHKBP1-224ENST00000600718 CYP2E1P05181 493 aaPredicted RBP21.25■□□□□ 0.99
SHKBP1-224ENST00000600718 ZMYM1Q5SVZ6 1142 aa21.25■□□□□ 0.99
SHKBP1-224ENST00000600718 PI16Q6UXB8 463 aa21.25■□□□□ 0.99
SHKBP1-224ENST00000600718 IL17RAQ96F46 866 aa21.25■□□□□ 0.99
SHKBP1-224ENST00000600718 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.25■□□□□ 0.995e-7■■■■□ 23.7
SHKBP1-224ENST00000600718 CCDC171Q6TFL3 1326 aa21.25■□□□□ 0.99
SHKBP1-224ENST00000600718 PTH1RQ03431 593 aa21.25■□□□□ 0.99
SHKBP1-224ENST00000600718 ZSCAN25Q6NSZ9 544 aa21.25■□□□□ 0.99
SHKBP1-224ENST00000600718 TMC4Q7Z404 712 aa21.25■□□□□ 0.99
SHKBP1-224ENST00000600718 TBC1D2Q9BYX2 928 aa21.25■□□□□ 0.99
SHKBP1-224ENST00000600718 LEMD3Q9Y2U8 911 aa21.25■□□□□ 0.99
SHKBP1-224ENST00000600718 ZNF804BA4D1E1 1349 aa21.25■□□□□ 0.99
SHKBP1-224ENST00000600718 RASGRF1Q13972 1273 aa21.24■□□□□ 0.99
SHKBP1-224ENST00000600718 FBXO33Q7Z6M2 555 aa21.23■□□□□ 0.99
SHKBP1-224ENST00000600718 MAP4K1Q92918 833 aa21.23■□□□□ 0.99
SHKBP1-224ENST00000600718 AKAP11Q9UKA4 1901 aa21.23■□□□□ 0.99
SHKBP1-224ENST00000600718 WTIPA6NIX2 430 aaPredicted RBP21.23■□□□□ 0.99
SHKBP1-224ENST00000600718 NPR1P16066 1061 aa21.23■□□□□ 0.99
SHKBP1-224ENST00000600718 GYG1P46976 350 aa21.23■□□□□ 0.99
SHKBP1-224ENST00000600718 SLC4A3P48751 1232 aa21.23■□□□□ 0.99
SHKBP1-224ENST00000600718 FAM84BQ96KN1 310 aaPredicted RBP21.23■□□□□ 0.99
SHKBP1-224ENST00000600718 ANKIB1Q9P2G1 1089 aa21.23■□□□□ 0.99
SHKBP1-224ENST00000600718 XDHP47989 1333 aa21.22■□□□□ 0.99
SHKBP1-224ENST00000600718 SRGNP10124 158 aa21.22■□□□□ 0.99
SHKBP1-224ENST00000600718 ZNF589Q86UQ0 364 aaPredicted RBP21.22■□□□□ 0.99
SHKBP1-224ENST00000600718 VPS37DQ86XT2 251 aa21.22■□□□□ 0.99
SHKBP1-224ENST00000600718 PIH1D3Q9NQM4 214 aaKnown RBP21.22■□□□□ 0.99
SHKBP1-224ENST00000600718 CHGBP05060 677 aa21.21■□□□□ 0.99
SHKBP1-224ENST00000600718 HSCBQ8IWL3 235 aa21.21■□□□□ 0.99
SHKBP1-224ENST00000600718 IL27Q8NEV9 243 aa21.21■□□□□ 0.99
SHKBP1-224ENST00000600718 SEMA3EO15041 775 aa21.21■□□□□ 0.99
SHKBP1-224ENST00000600718 ZBTB22O15209 634 aa21.21■□□□□ 0.99
SHKBP1-224ENST00000600718 ALDH1B1P30837 517 aa21.21■□□□□ 0.99
SHKBP1-224ENST00000600718 SEC62Q99442 399 aaKnown RBP21.21■□□□□ 0.99
SHKBP1-224ENST00000600718 PALD1Q9ULE6 856 aa21.21■□□□□ 0.99
SHKBP1-224ENST00000600718 HIBADHP31937 336 aaKnown RBP21.2■□□□□ 0.98
SHKBP1-224ENST00000600718 NECTIN1Q15223 517 aa21.2■□□□□ 0.98
SHKBP1-224ENST00000600718 SLC16A10Q8TF71 515 aa21.2■□□□□ 0.98
SHKBP1-224ENST00000600718 APPBP2Q92624 585 aa21.2■□□□□ 0.98
SHKBP1-224ENST00000600718 KCNB2Q92953 911 aa21.2■□□□□ 0.98
SHKBP1-224ENST00000600718 DENND2AQ9ULE3 1009 aa21.2■□□□□ 0.98
SHKBP1-224ENST00000600718 ANKRD31Q8N7Z5 1873 aa21.2■□□□□ 0.98
SHKBP1-224ENST00000600718 MASTLQ96GX5 879 aa21.19■□□□□ 0.98
SHKBP1-224ENST00000600718 RBM8AQ9Y5S9 174 aaKnown RBP21.19■□□□□ 0.98
SHKBP1-224ENST00000600718 ATP2B4P23634 1241 aa21.19■□□□□ 0.98
SHKBP1-224ENST00000600718 ADD2P35612 726 aa21.19■□□□□ 0.98
SHKBP1-224ENST00000600718 GPSM2P81274 684 aa21.19■□□□□ 0.98
SHKBP1-224ENST00000600718 UBE3CQ15386 1083 aa21.19■□□□□ 0.98
SHKBP1-224ENST00000600718 C15orf52Q6ZUT6 534 aaKnown RBP21.19■□□□□ 0.98
SHKBP1-224ENST00000600718 SP8Q8IXZ3 490 aa21.19■□□□□ 0.98
SHKBP1-224ENST00000600718 IDH1O75874 414 aaKnown RBP21.18■□□□□ 0.98
SHKBP1-224ENST00000600718 MAP3K12Q12852 859 aa21.18■□□□□ 0.98
SHKBP1-224ENST00000600718 WASHC4Q2M389 1173 aa21.18■□□□□ 0.98
SHKBP1-224ENST00000600718 SLFNL1Q499Z3 407 aa21.18■□□□□ 0.98
SHKBP1-224ENST00000600718 SLC9C2Q5TAH2 1124 aa21.18■□□□□ 0.98
SHKBP1-224ENST00000600718 CCDC129Q6ZRS4 1044 aa21.18■□□□□ 0.98
SHKBP1-224ENST00000600718 OSBP2Q969R2 916 aa21.18■□□□□ 0.98
SHKBP1-224ENST00000600718 PODXL2Q9NZ53 605 aa21.18■□□□□ 0.98
SHKBP1-224ENST00000600718 SNX14Q9Y5W7 946 aa21.18■□□□□ 0.98
SHKBP1-224ENST00000600718 MAST3O60307 1309 aa21.18■□□□□ 0.98
SHKBP1-224ENST00000600718 IRS2Q9Y4H2 1338 aa21.18■□□□□ 0.98
SHKBP1-224ENST00000600718 PPEF1O14829 653 aaPredicted RBP21.17■□□□□ 0.98
SHKBP1-224ENST00000600718 NSFL1CQ9UNZ2 370 aaKnown RBP21.17■□□□□ 0.98
SHKBP1-224ENST00000600718 ST18O60284 1047 aa21.17■□□□□ 0.98
SHKBP1-224ENST00000600718 PRKCSHP14314 528 aaPredicted RBP21.17■□□□□ 0.98
SHKBP1-224ENST00000600718 KLRK1P26718 216 aa21.17■□□□□ 0.98
SHKBP1-224ENST00000600718 RNF20Q5VTR2 975 aa21.17■□□□□ 0.98
SHKBP1-224ENST00000600718 PRPF40BQ6NWY9 871 aaKnown RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms