RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 DGKZQ13574 1117 aa24.12■■□□□ 1.45
FARP1-229ENST00000600190 UBE3BQ7Z3V4 1068 aa24.12■■□□□ 1.45
FARP1-229ENST00000600190 PSME4Q14997 1843 aa24.12■■□□□ 1.45
FARP1-229ENST00000600190 SPEF2Q9C093 1822 aa24.12■■□□□ 1.45
FARP1-229ENST00000600190 CCT4P50991 539 aaKnown RBP24.11■■□□□ 1.45
FARP1-229ENST00000600190 CCDC27Q2M243 656 aa24.11■■□□□ 1.45
FARP1-229ENST00000600190 FBXW7Q969H0 707 aa24.11■■□□□ 1.45
FARP1-229ENST00000600190 SCAF8Q9UPN6 1271 aaKnown RBP24.11■■□□□ 1.45
FARP1-229ENST00000600190 MYH3P11055 1940 aa24.11■■□□□ 1.45
FARP1-229ENST00000600190 MED23Q9ULK4 1368 aa24.1■■□□□ 1.45
FARP1-229ENST00000600190 H7C1W4 665 aa24.09■■□□□ 1.45
FARP1-229ENST00000600190 TRPA1O75762 1119 aa24.09■■□□□ 1.45
FARP1-229ENST00000600190 SLC10A3P09131 477 aa24.09■■□□□ 1.45
FARP1-229ENST00000600190 IGHMBP2P38935 993 aaKnown RBP24.09■■□□□ 1.45
FARP1-229ENST00000600190 MIER1Q8N108 512 aa24.09■■□□□ 1.45
FARP1-229ENST00000600190 MXD3Q9BW11 206 aa24.09■■□□□ 1.45
FARP1-229ENST00000600190 RNF186Q9NXI6 227 aa24.08■■□□□ 1.45
FARP1-229ENST00000600190 SAGE1Q9NXZ1 904 aa24.08■■□□□ 1.45
FARP1-229ENST00000600190 PITPNM2Q9BZ72 1349 aa24.08■■□□□ 1.44
FARP1-229ENST00000600190 MLLT1Q03111 559 aaPredicted RBP24.07■■□□□ 1.44
FARP1-229ENST00000600190 GCKRQ14397 625 aa24.07■■□□□ 1.44
FARP1-229ENST00000600190 NBPF9Q3BBW0 867 aa24.07■■□□□ 1.44
FARP1-229ENST00000600190 DACT2Q5SW24 774 aa24.07■■□□□ 1.44
FARP1-229ENST00000600190 OGFOD1Q8N543 542 aa24.07■■□□□ 1.44
FARP1-229ENST00000600190 CSRNP1Q96S65 589 aa24.07■■□□□ 1.44
FARP1-229ENST00000600190 ITGA6P23229 1130 aa24.06■■□□□ 1.44
FARP1-229ENST00000600190 FLIIQ13045 1269 aa24.06■■□□□ 1.44
FARP1-229ENST00000600190 FKBP5Q13451 457 aaPredicted RBP24.06■■□□□ 1.44
FARP1-229ENST00000600190 COA1Q9GZY4 146 aa24.06■■□□□ 1.44
FARP1-229ENST00000600190 LEMD3Q9Y2U8 911 aa24.06■■□□□ 1.44
FARP1-229ENST00000600190 FKBP1BP68106 108 aa24.05■■□□□ 1.44
FARP1-229ENST00000600190 PRAMEF18Q5VWM3 479 aa24.05■■□□□ 1.44
FARP1-229ENST00000600190 TXNRD3Q86VQ6 643 aa24.05■■□□□ 1.44
FARP1-229ENST00000600190 MPHOSPH8Q99549 860 aa24.05■■□□□ 1.44
FARP1-229ENST00000600190 IL16Q14005 1332 aa24.05■■□□□ 1.44
FARP1-229ENST00000600190 RGS19P49795 217 aa24.04■■□□□ 1.44
FARP1-229ENST00000600190 STRIP1Q5VSL9 837 aa24.04■■□□□ 1.44
FARP1-229ENST00000600190 MOB2Q70IA6 237 aa24.04■■□□□ 1.44
FARP1-229ENST00000600190 RASAL3Q86YV0 1011 aa24.04■■□□□ 1.44
FARP1-229ENST00000600190 PLA2G12BQ9BX93 195 aa24.04■■□□□ 1.44
FARP1-229ENST00000600190 ANKRD2Q9GZV1 360 aa24.04■■□□□ 1.44
FARP1-229ENST00000600190 MYH16Q9H6N6 1097 aa24.04■■□□□ 1.44
FARP1-229ENST00000600190 SALL2Q9Y467 1007 aaPredicted RBP24.04■■□□□ 1.44
FARP1-229ENST00000600190 ZNF804BA4D1E1 1349 aa24.04■■□□□ 1.44
FARP1-229ENST00000600190 MYO3BQ8WXR4 1341 aa24.04■■□□□ 1.44
FARP1-229ENST00000600190 AKAP11Q9UKA4 1901 aa24.04■■□□□ 1.44
FARP1-229ENST00000600190 NCBP3Q53F19 620 aaKnown RBP24.03■■□□□ 1.44
FARP1-229ENST00000600190 DNAAF4Q8WXU2 420 aa24.03■■□□□ 1.44
FARP1-229ENST00000600190 UBE2Q2LH0YL09 131 aa24.02■■□□□ 1.44
FARP1-229ENST00000600190 WNT10BO00744 389 aa24.02■■□□□ 1.44
FARP1-229ENST00000600190 KLRK1P26718 216 aa24.02■■□□□ 1.44
FARP1-229ENST00000600190 TTLL12Q14166 644 aaPredicted RBP24.02■■□□□ 1.44
FARP1-229ENST00000600190 TTLL5Q6EMB2 1281 aa24.02■■□□□ 1.44
FARP1-229ENST00000600190 REM2Q8IYK8 340 aaPredicted RBP24.02■■□□□ 1.44
FARP1-229ENST00000600190 FANCIQ9NVI1 1328 aa24.02■■□□□ 1.44
FARP1-229ENST00000600190 PAPPA2Q9BXP8 1791 aa24.01■■□□□ 1.43
FARP1-229ENST00000600190 CSF1RP07333 972 aa24.01■■□□□ 1.43
FARP1-229ENST00000600190 KCNJ4P48050 445 aa24.01■■□□□ 1.43
FARP1-229ENST00000600190 CASP7P55210 303 aa24.01■■□□□ 1.43
FARP1-229ENST00000600190 LINS1Q8NG48 757 aa24.01■■□□□ 1.43
FARP1-229ENST00000600190 SASH1O94885 1247 aa24■■□□□ 1.43
FARP1-229ENST00000600190 GTF2IP78347 998 aa23.99■■□□□ 1.43
FARP1-229ENST00000600190 CHRNDQ07001 517 aa23.99■■□□□ 1.43
FARP1-229ENST00000600190 KIAA0825Q8IV33 1275 aa23.99■■□□□ 1.43
FARP1-229ENST00000600190 ZNF646O15015 1829 aaPredicted RBP23.98■■□□□ 1.43
FARP1-229ENST00000600190 ANKRD18BA2A2Z9 1011 aa23.98■■□□□ 1.43
FARP1-229ENST00000600190 VAMP4O75379 141 aa23.98■■□□□ 1.43
FARP1-229ENST00000600190 NF2P35240 595 aa23.98■■□□□ 1.43
FARP1-229ENST00000600190 HDAC9Q9UKV0 1011 aa23.98■■□□□ 1.43
FARP1-229ENST00000600190 MMP14P50281 582 aa23.97■■□□□ 1.43
FARP1-229ENST00000600190 EXOSC9Q06265 439 aaKnown RBP23.97■■□□□ 1.43
FARP1-229ENST00000600190 TAF5LO75529 589 aa23.96■■□□□ 1.43
FARP1-229ENST00000600190 WDR63Q8IWG1 891 aa23.96■■□□□ 1.43
FARP1-229ENST00000600190 CHMP3Q9Y3E7 222 aa23.96■■□□□ 1.43
FARP1-229ENST00000600190 SNAP23O00161 211 aa23.95■■□□□ 1.42
FARP1-229ENST00000600190 PRKG1Q13976 671 aa23.95■■□□□ 1.42
FARP1-229ENST00000600190 HELBQ8NG08 1087 aaPredicted RBP23.95■■□□□ 1.42
FARP1-229ENST00000600190 CD209Q9NNX6 404 aa23.95■■□□□ 1.42
FARP1-229ENST00000600190 CACNA1FO60840 1977 aa23.94■■□□□ 1.42
FARP1-229ENST00000600190 F6X3S4 739 aa23.94■■□□□ 1.42
FARP1-229ENST00000600190 MKRN3Q13064 507 aaKnown RBP23.94■■□□□ 1.42
FARP1-229ENST00000600190 IFIT5Q13325 482 aaKnown RBP23.94■■□□□ 1.42
FARP1-229ENST00000600190 TNRC18O15417 2968 aaPredicted RBP23.94■■□□□ 1.42
FARP1-229ENST00000600190 FOXO4P98177 505 aa23.93■■□□□ 1.42
FARP1-229ENST00000600190 CTU1Q7Z7A3 348 aaKnown RBP23.93■■□□□ 1.42
FARP1-229ENST00000600190 APOBEC3FQ8IUX4 373 aaKnown RBP23.93■■□□□ 1.42
FARP1-229ENST00000600190 TBC1D8O95759 1140 aa23.92■■□□□ 1.42
FARP1-229ENST00000600190 BEND3Q5T5X7 828 aa23.92■■□□□ 1.42
FARP1-229ENST00000600190 DLGAP5Q15398 846 aa23.91■■□□□ 1.42
FARP1-229ENST00000600190 ARMC9Q7Z3E5 817 aa23.91■■□□□ 1.42
FARP1-229ENST00000600190 PTPN12Q05209 780 aaKnown RBP23.9■■□□□ 1.42
FARP1-229ENST00000600190 LMBR1LQ6UX01 489 aa23.9■■□□□ 1.42
FARP1-229ENST00000600190 ZBED3Q96IU2 234 aaPredicted RBP23.9■■□□□ 1.42
FARP1-229ENST00000600190 F8W031 263 aaPredicted RBP23.89■■□□□ 1.41
FARP1-229ENST00000600190 PLIN1O60240 522 aa23.89■■□□□ 1.41
FARP1-229ENST00000600190 TM4SF4P48230 202 aa23.89■■□□□ 1.41
FARP1-229ENST00000600190 SOX10P56693 466 aa23.89■■□□□ 1.41
FARP1-229ENST00000600190 TAF7LQ5H9L4 462 aa23.89■■□□□ 1.41
FARP1-229ENST00000600190 ZNF804AQ7Z570 1209 aa23.89■■□□□ 1.41
FARP1-229ENST00000600190 CERS5Q8N5B7 392 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms