RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 JDP2Q8WYK2 163 aa17.09■□□□□ 0.33
SYMPK-213ENST00000599460 AOX1Q06278 1338 aa17.09■□□□□ 0.33
SYMPK-213ENST00000599460 AK2P54819 239 aa17.08■□□□□ 0.33
SYMPK-213ENST00000599460 TRMT2AQ8IZ69 625 aaKnown RBP17.08■□□□□ 0.33
SYMPK-213ENST00000599460 ALG1Q9BT22 464 aa17.08■□□□□ 0.33
SYMPK-213ENST00000599460 EHMT1Q9H9B1 1298 aa17.08■□□□□ 0.33
SYMPK-213ENST00000599460 SYCP1Q15431 976 aa17.08■□□□□ 0.33
SYMPK-213ENST00000599460 QTRT2Q9H974 415 aaKnown RBP17.08■□□□□ 0.32
SYMPK-213ENST00000599460 VEZTQ9HBM0 779 aa17.08■□□□□ 0.32
SYMPK-213ENST00000599460 SPATA31A3Q5VYP0 1347 aa17.08■□□□□ 0.32
SYMPK-213ENST00000599460 LPIN2Q92539 896 aa17.08■□□□□ 0.32
SYMPK-213ENST00000599460 ZSCAN16Q9H4T2 348 aaPredicted RBP17.08■□□□□ 0.32
SYMPK-213ENST00000599460 GGA1Q9UJY5 639 aa17.08■□□□□ 0.32
SYMPK-213ENST00000599460 CNNM3Q8NE01 707 aa17.07■□□□□ 0.32
SYMPK-213ENST00000599460 TRPC5Q9UL62 973 aaPredicted RBP17.07■□□□□ 0.32
SYMPK-213ENST00000599460 ADGRL3Q9HAR2 1447 aa17.07■□□□□ 0.32
SYMPK-213ENST00000599460 CCP110O43303 1012 aa17.07■□□□□ 0.32
SYMPK-213ENST00000599460 RUFY3Q7L099 469 aa17.07■□□□□ 0.32
SYMPK-213ENST00000599460 ANO10Q9NW15 660 aa17.07■□□□□ 0.32
SYMPK-213ENST00000599460 MROH5Q6ZUA9 1318 aa17.07■□□□□ 0.32
SYMPK-213ENST00000599460 PROSER3Q2NL68 480 aa17.07■□□□□ 0.32
SYMPK-213ENST00000599460 ZFYVE27Q5T4F4 411 aa17.07■□□□□ 0.32
SYMPK-213ENST00000599460 ERBB4Q15303 1308 aa17.07■□□□□ 0.32
SYMPK-213ENST00000599460 CKAP2LQ8IYA6 745 aa17.07■□□□□ 0.32
SYMPK-213ENST00000599460 LOC102724428A0A0B4J2F2 783 aa17.07■□□□□ 0.32
SYMPK-213ENST00000599460 CTSWP56202 376 aa17.07■□□□□ 0.32
SYMPK-213ENST00000599460 SIK1P57059 783 aa17.07■□□□□ 0.32
SYMPK-213ENST00000599460 APOBRQ0VD83 1088 aa17.07■□□□□ 0.32
SYMPK-213ENST00000599460 CNKSR2Q8WXI2 1034 aa17.07■□□□□ 0.32
SYMPK-213ENST00000599460 BRPF3Q9ULD4 1205 aa17.07■□□□□ 0.32
SYMPK-213ENST00000599460 QRICH2Q9H0J4 1663 aa17.06■□□□□ 0.32
SYMPK-213ENST00000599460 RBM26Q5T8P6 1007 aaKnown RBP17.06■□□□□ 0.32
SYMPK-213ENST00000599460 DHX32Q7L7V1 743 aaKnown RBP17.06■□□□□ 0.32
SYMPK-213ENST00000599460 NDUFB9Q9Y6M9 179 aa17.06■□□□□ 0.32
SYMPK-213ENST00000599460 PRM3Q9NNZ6 103 aa17.06■□□□□ 0.32
SYMPK-213ENST00000599460 RBM25P49756 843 aaKnown RBP17.06■□□□□ 0.32
SYMPK-213ENST00000599460 PPP4R3BQ5MIZ7 849 aa17.06■□□□□ 0.32
SYMPK-213ENST00000599460 KLHL10Q6JEL2 608 aa17.06■□□□□ 0.32
SYMPK-213ENST00000599460 CAGE1Q8TC20 777 aa17.05■□□□□ 0.32
SYMPK-213ENST00000599460 PRAMEF22A3QJZ6 481 aa17.05■□□□□ 0.32
SYMPK-213ENST00000599460 CTAGE5O15320 804 aa17.05■□□□□ 0.32
SYMPK-213ENST00000599460 MATR3P43243 847 aaKnown RBP eCLIP17.05■□□□□ 0.32
SYMPK-213ENST00000599460 DEF6Q9H4E7 631 aa17.05■□□□□ 0.32
SYMPK-213ENST00000599460 DDX19AQ9NUU7 478 aaKnown RBP17.05■□□□□ 0.32
SYMPK-213ENST00000599460 BCORL1Q5H9F3 1711 aa17.05■□□□□ 0.32
SYMPK-213ENST00000599460 FAM227BQ96M60 508 aa17.05■□□□□ 0.32
SYMPK-213ENST00000599460 ARMT1Q9H993 441 aa17.05■□□□□ 0.32
SYMPK-213ENST00000599460 GNAQP50148 359 aa17.04■□□□□ 0.32
SYMPK-213ENST00000599460 GPS2Q13227 327 aa17.04■□□□□ 0.32
SYMPK-213ENST00000599460 PANK2Q9BZ23 570 aa17.04■□□□□ 0.32
SYMPK-213ENST00000599460 WDHD1O75717 1129 aaPredicted RBP17.04■□□□□ 0.32
SYMPK-213ENST00000599460 HEATR3Q7Z4Q2 680 aa17.04■□□□□ 0.32
SYMPK-213ENST00000599460 FILIP1Q7Z7B0 1213 aa17.04■□□□□ 0.32
SYMPK-213ENST00000599460 H0YIN7 160 aa17.04■□□□□ 0.32
SYMPK-213ENST00000599460 CRKLP46109 303 aaKnown RBP17.04■□□□□ 0.32
SYMPK-213ENST00000599460 CFAP100Q494V2 611 aa17.04■□□□□ 0.32
SYMPK-213ENST00000599460 ZBTB38Q8NAP3 1195 aaPredicted RBP17.04■□□□□ 0.32
SYMPK-213ENST00000599460 SSH3Q8TE77 659 aa17.04■□□□□ 0.32
SYMPK-213ENST00000599460 TCP11L1Q9NUJ3 509 aa17.04■□□□□ 0.32
SYMPK-213ENST00000599460 ZNF521Q96K83 1311 aa17.04■□□□□ 0.32
SYMPK-213ENST00000599460 RTL9Q8NET4 1388 aa17.04■□□□□ 0.32
SYMPK-213ENST00000599460 MAP3K15Q6ZN16 1313 aa17.03■□□□□ 0.32
SYMPK-213ENST00000599460 SETBP1Q9Y6X0 1596 aa17.03■□□□□ 0.32
SYMPK-213ENST00000599460 TULP4Q9NRJ4 1543 aa17.03■□□□□ 0.32
SYMPK-213ENST00000599460 CALM1P0DP23 149 aa17.03■□□□□ 0.32
SYMPK-213ENST00000599460 CALM2P0DP24 149 aa17.03■□□□□ 0.32
SYMPK-213ENST00000599460 CALM3P0DP25 149 aa17.03■□□□□ 0.32
SYMPK-213ENST00000599460 SPATA5Q8NB90 893 aa17.03■□□□□ 0.32
SYMPK-213ENST00000599460 APPBP2Q92624 585 aa17.03■□□□□ 0.32
SYMPK-213ENST00000599460 PDCL3Q9H2J4 239 aa17.03■□□□□ 0.32
SYMPK-213ENST00000599460 ZNF853P0CG23 659 aa17.03■□□□□ 0.32
SYMPK-213ENST00000599460 CPA1P15085 419 aa17.03■□□□□ 0.32
SYMPK-213ENST00000599460 UBE2HP62256 183 aa17.03■□□□□ 0.32
SYMPK-213ENST00000599460 DPP8Q6V1X1 898 aaPredicted RBP17.03■□□□□ 0.32
SYMPK-213ENST00000599460 KBTBD3Q8NAB2 608 aa17.03■□□□□ 0.32
SYMPK-213ENST00000599460 SAP30BPQ9UHR5 308 aaKnown RBP17.02■□□□□ 0.32
SYMPK-213ENST00000599460 PAXIP1Q6ZW49 1069 aaPredicted RBP17.02■□□□□ 0.32
SYMPK-213ENST00000599460 TEX11Q8IYF3 940 aa17.02■□□□□ 0.32
SYMPK-213ENST00000599460 CCDC148Q8NFR7 591 aa17.02■□□□□ 0.32
SYMPK-213ENST00000599460 ZAP70P43403 619 aa17.02■□□□□ 0.31
SYMPK-213ENST00000599460 CALML4Q96GE6 196 aa17.02■□□□□ 0.31
SYMPK-213ENST00000599460 ZKSCAN3Q9BRR0 538 aa17.02■□□□□ 0.31
SYMPK-213ENST00000599460 PCCAP05165 728 aaPredicted RBP17.02■□□□□ 0.31
SYMPK-213ENST00000599460 EIF5P55010 431 aaKnown RBP17.02■□□□□ 0.31
SYMPK-213ENST00000599460 CNPY2Q9Y2B0 182 aa17.02■□□□□ 0.31
SYMPK-213ENST00000599460 SLC27A2O14975 620 aa17.01■□□□□ 0.31
SYMPK-213ENST00000599460 GPAA1O43292 621 aa17.01■□□□□ 0.31
SYMPK-213ENST00000599460 RXRAP19793 462 aa17.01■□□□□ 0.31
SYMPK-213ENST00000599460 FAM182BQ5T319 152 aa17.01■□□□□ 0.31
SYMPK-213ENST00000599460 UBA5Q9GZZ9 404 aa17.01■□□□□ 0.31
SYMPK-213ENST00000599460 SGSM2O43147 1006 aa17■□□□□ 0.31
SYMPK-213ENST00000599460 TNNT3P45378 269 aaPredicted RBP17■□□□□ 0.31
SYMPK-213ENST00000599460 RPS8P62241 208 aaKnown RBP17■□□□□ 0.31
SYMPK-213ENST00000599460 NOM1Q5C9Z4 860 aaKnown RBP17■□□□□ 0.31
SYMPK-213ENST00000599460 UNC5CLQ8IV45 518 aa17■□□□□ 0.31
SYMPK-213ENST00000599460 UBA7P41226 1012 aa17■□□□□ 0.31
SYMPK-213ENST00000599460 BAG6P46379 1132 aa17■□□□□ 0.31
SYMPK-213ENST00000599460 CHMP4BP1P59074 171 aa17■□□□□ 0.31
SYMPK-213ENST00000599460 USPL1Q5W0Q7 1092 aa17■□□□□ 0.31
SYMPK-213ENST00000599460 RBM27Q9P2N5 1060 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms