RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 TBC1D10BQ4KMP7 808 aaPredicted RBP28.4■■■□□ 2.14
CCDC9-204ENST00000599398 RSBN1LQ6PCB5 846 aaPredicted RBP28.4■■■□□ 2.14
CCDC9-204ENST00000599398 RABL6Q3YEC7 729 aaPredicted RBP28.39■■■□□ 2.14
CCDC9-204ENST00000599398 RBM26Q5T8P6 1007 aaKnown RBP28.39■■■□□ 2.14
CCDC9-204ENST00000599398 ANKRD44Q8N8A2 993 aa28.39■■■□□ 2.14
CCDC9-204ENST00000599398 AGBL3Q8NEM8 1001 aa28.38■■■□□ 2.13
CCDC9-204ENST00000599398 ZC3H15Q8WU90 426 aaKnown RBP28.37■■■□□ 2.13
CCDC9-204ENST00000599398 TRAF5O00463 557 aa28.36■■■□□ 2.13
CCDC9-204ENST00000599398 FMR1Q06787 632 aaKnown RBP eCLIP28.36■■■□□ 2.13
CCDC9-204ENST00000599398 PUS3Q9BZE2 481 aaKnown RBP28.36■■■□□ 2.13
CCDC9-204ENST00000599398 MKRN1Q9UHC7 482 aaKnown RBP28.36■■■□□ 2.13
CCDC9-204ENST00000599398 EGFRP00533 1210 aa28.35■■■□□ 2.13
CCDC9-204ENST00000599398 UBTFL1P0CB47 393 aaPredicted RBP28.35■■■□□ 2.13
CCDC9-204ENST00000599398 KIF4BQ2VIQ3 1234 aa28.35■■■□□ 2.13
CCDC9-204ENST00000599398 ARHGAP45Q92619 1136 aa28.35■■■□□ 2.13
CCDC9-204ENST00000599398 FRAT1Q92837 279 aaPredicted RBP28.35■■■□□ 2.13
CCDC9-204ENST00000599398 GLIS2Q9BZE0 524 aaPredicted RBP28.35■■■□□ 2.13
CCDC9-204ENST00000599398 PGAP2Q9UHJ9 254 aa28.35■■■□□ 2.13
CCDC9-204ENST00000599398 TRPM7Q96QT4 1865 aa28.34■■■□□ 2.13
CCDC9-204ENST00000599398 IPO8O15397 1037 aaKnown RBP28.34■■■□□ 2.13
CCDC9-204ENST00000599398 BCAR3O75815 825 aa28.34■■■□□ 2.13
CCDC9-204ENST00000599398 ZBED9Q6R2W3 1325 aa28.34■■■□□ 2.13
CCDC9-204ENST00000599398 STRIP1Q5VSL9 837 aa28.33■■■□□ 2.13
CCDC9-204ENST00000599398 MXD3Q9BW11 206 aa28.33■■■□□ 2.13
CCDC9-204ENST00000599398 ZNF609O15014 1411 aa28.33■■■□□ 2.13
CCDC9-204ENST00000599398 USP17L8P0C7I0 530 aa28.32■■■□□ 2.12
CCDC9-204ENST00000599398 DACT2Q5SW24 774 aa28.32■■■□□ 2.12
CCDC9-204ENST00000599398 TTLL5Q6EMB2 1281 aa28.32■■■□□ 2.12
CCDC9-204ENST00000599398 C15orf52Q6ZUT6 534 aaKnown RBP28.32■■■□□ 2.12
CCDC9-204ENST00000599398 ZNF804AQ7Z570 1209 aa28.32■■■□□ 2.12
CCDC9-204ENST00000599398 GMLQ99445 158 aa28.32■■■□□ 2.12
CCDC9-204ENST00000599398 CD209Q9NNX6 404 aa28.32■■■□□ 2.12
CCDC9-204ENST00000599398 POLR2AP24928 1970 aaKnown RBP28.31■■■□□ 2.12
CCDC9-204ENST00000599398 CDC37L1Q7L3B6 337 aa28.31■■■□□ 2.12
CCDC9-204ENST00000599398 JMYQ8N9B5 988 aa28.31■■■□□ 2.12
CCDC9-204ENST00000599398 KLHDC4Q8TBB5 520 aa28.31■■■□□ 2.12
CCDC9-204ENST00000599398 ABT1Q9ULW3 272 aaKnown RBP28.31■■■□□ 2.12
CCDC9-204ENST00000599398 RIPOR2Q9Y4F9 1068 aa28.31■■■□□ 2.12
CCDC9-204ENST00000599398 MROH5Q6ZUA9 1318 aa28.31■■■□□ 2.12
CCDC9-204ENST00000599398 IRS2Q9Y4H2 1338 aa28.31■■■□□ 2.12
CCDC9-204ENST00000599398 ZNF280AP59817 542 aaPredicted RBP28.3■■■□□ 2.12
CCDC9-204ENST00000599398 GTF2IP78347 998 aa28.3■■■□□ 2.12
CCDC9-204ENST00000599398 LRRC24Q50LG9 513 aa28.3■■■□□ 2.12
CCDC9-204ENST00000599398 PCNTO95613 3336 aa28.3■■■□□ 2.12
CCDC9-204ENST00000599398 CNTNAP1P78357 1384 aa28.29■■■□□ 2.12
CCDC9-204ENST00000599398 MYO3BQ8WXR4 1341 aa28.29■■■□□ 2.12
CCDC9-204ENST00000599398 METTL24Q5JXM2 366 aa28.29■■■□□ 2.12
CCDC9-204ENST00000599398 DCPSQ96C86 337 aaKnown RBP28.29■■■□□ 2.12
CCDC9-204ENST00000599398 HDAC5Q9UQL6 1122 aa28.29■■■□□ 2.12
CCDC9-204ENST00000599398 ZNF646O15015 1829 aaPredicted RBP28.29■■■□□ 2.12
CCDC9-204ENST00000599398 TRIM27P14373 513 aa28.28■■■□□ 2.12
CCDC9-204ENST00000599398 UBE4AQ14139 1066 aa28.28■■■□□ 2.12
CCDC9-204ENST00000599398 INTS3Q68E01 1043 aaKnown RBP28.28■■■□□ 2.12
CCDC9-204ENST00000599398 ATF7IPQ6VMQ6 1270 aa28.28■■■□□ 2.12
CCDC9-204ENST00000599398 USP48Q86UV5 1035 aa28.28■■■□□ 2.12
CCDC9-204ENST00000599398 MYOZ2Q9NPC6 264 aa28.28■■■□□ 2.12
CCDC9-204ENST00000599398 LRRFIP2Q9Y608 721 aaKnown RBP28.28■■■□□ 2.12
CCDC9-204ENST00000599398 CELF2O95319 508 aaKnown RBP28.27■■■□□ 2.12
CCDC9-204ENST00000599398 KRT26Q7Z3Y9 468 aa28.27■■■□□ 2.12
CCDC9-204ENST00000599398 OGFOD1Q8N543 542 aa28.27■■■□□ 2.12
CCDC9-204ENST00000599398 MEIS3Q99687 375 aa28.27■■■□□ 2.12
CCDC9-204ENST00000599398 ZNF408Q9H9D4 720 aa28.27■■■□□ 2.12
CCDC9-204ENST00000599398 CST9Q5W186 159 aa28.26■■■□□ 2.11
CCDC9-204ENST00000599398 CLUAP1Q96AJ1 413 aa28.26■■■□□ 2.11
CCDC9-204ENST00000599398 GGA3Q9NZ52 723 aa28.26■■■□□ 2.11
CCDC9-204ENST00000599398 TNNQ9UQP3 1299 aa28.26■■■□□ 2.11
CCDC9-204ENST00000599398 SCARF1Q14162 830 aa28.25■■■□□ 2.11
CCDC9-204ENST00000599398 DEFB115Q30KQ5 88 aa28.25■■■□□ 2.11
CCDC9-204ENST00000599398 ASTN2O75129 1339 aaPredicted RBP28.24■■■□□ 2.11
CCDC9-204ENST00000599398 IL1R1P14778 569 aa28.24■■■□□ 2.11
CCDC9-204ENST00000599398 RFX5P48382 616 aaPredicted RBP28.24■■■□□ 2.11
CCDC9-204ENST00000599398 ZKSCAN2Q63HK3 967 aa28.24■■■□□ 2.11
CCDC9-204ENST00000599398 KIAA0825Q8IV33 1275 aa28.24■■■□□ 2.11
CCDC9-204ENST00000599398 GNAI3P08754 354 aa28.23■■■□□ 2.11
CCDC9-204ENST00000599398 GYG1P46976 350 aa28.23■■■□□ 2.11
CCDC9-204ENST00000599398 SULF1Q8IWU6 871 aa28.23■■■□□ 2.11
CCDC9-204ENST00000599398 RASSF10A6NK89 507 aa28.22■■■□□ 2.11
CCDC9-204ENST00000599398 ADM5C9JUS6 153 aa28.22■■■□□ 2.11
CCDC9-204ENST00000599398 PDE8BO95263 885 aa28.22■■■□□ 2.11
CCDC9-204ENST00000599398 HIBADHP31937 336 aaKnown RBP28.22■■■□□ 2.11
CCDC9-204ENST00000599398 VEGFBP49765 207 aa28.22■■■□□ 2.11
CCDC9-204ENST00000599398 PTPN12Q05209 780 aaKnown RBP28.22■■■□□ 2.11
CCDC9-204ENST00000599398 ANGEL2Q5VTE6 544 aaKnown RBP28.22■■■□□ 2.11
CCDC9-204ENST00000599398 DLK2Q6UY11 383 aa28.22■■■□□ 2.11
CCDC9-204ENST00000599398 PAXIP1Q6ZW49 1069 aaPredicted RBP28.22■■■□□ 2.11
CCDC9-204ENST00000599398 HDAC9Q9UKV0 1011 aa28.22■■■□□ 2.11
CCDC9-204ENST00000599398 JAG2Q9Y219 1238 aa28.22■■■□□ 2.11
CCDC9-204ENST00000599398 EYA2O00167 538 aa28.21■■■□□ 2.11
CCDC9-204ENST00000599398 VPS37DQ86XT2 251 aa28.21■■■□□ 2.11
CCDC9-204ENST00000599398 SIL1Q9H173 461 aa28.21■■■□□ 2.11
CCDC9-204ENST00000599398 VGLL2Q8N8G2 317 aa28.2■■■□□ 2.1
CCDC9-204ENST00000599398 FAM84BQ96KN1 310 aaPredicted RBP28.2■■■□□ 2.1
CCDC9-204ENST00000599398 TLL2Q9Y6L7 1015 aa28.2■■■□□ 2.1
CCDC9-204ENST00000599398 SASH1O94885 1247 aa28.18■■■□□ 2.1
CCDC9-204ENST00000599398 MMP14P50281 582 aa28.18■■■□□ 2.1
CCDC9-204ENST00000599398 NBPF9Q3BBW0 867 aa28.18■■■□□ 2.1
CCDC9-204ENST00000599398 CAVIN4Q5BKX8 364 aa28.18■■■□□ 2.1
CCDC9-204ENST00000599398 CERS5Q8N5B7 392 aa28.18■■■□□ 2.1
CCDC9-204ENST00000599398 F8W031 263 aaPredicted RBP28.17■■■□□ 2.1
CCDC9-204ENST00000599398 GRM1Q13255 1194 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms