RNA–Protein interactions for RNA: ENST00000596828.1

LINC01440-203, Transcript of long intergenic non-protein coding RNA 1440, humanhuman

TSL 5 BASIC

Gene LINC01440, Length 1,005 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01440-203ENST00000596828 PYGBP11216 843 aa12.56□□□□□ -0.4
LINC01440-203ENST00000596828 ITGA6P23229 1130 aa12.56□□□□□ -0.4
LINC01440-203ENST00000596828 CASP7P55210 303 aa12.56□□□□□ -0.4
LINC01440-203ENST00000596828 TNIP1Q15025 636 aa12.56□□□□□ -0.4
LINC01440-203ENST00000596828 MRPL50Q8N5N7 158 aaKnown RBP12.56□□□□□ -0.4
LINC01440-203ENST00000596828 C9orf78Q9NZ63 289 aaPredicted RBP12.56□□□□□ -0.4
LINC01440-203ENST00000596828 GPRC5DQ9NZD1 345 aa12.56□□□□□ -0.4
LINC01440-203ENST00000596828 SHTN1A0MZ66 631 aa12.55□□□□□ -0.4
LINC01440-203ENST00000596828 PSMD14O00487 310 aa12.55□□□□□ -0.4
LINC01440-203ENST00000596828 IGHMBP2P38935 993 aaKnown RBP12.55□□□□□ -0.4
LINC01440-203ENST00000596828 SSH1Q8WYL5 1049 aa12.55□□□□□ -0.4
LINC01440-203ENST00000596828 SRCIN1Q9C0H9 1055 aa12.55□□□□□ -0.4
LINC01440-203ENST00000596828 PODXL2Q9NZ53 605 aa12.55□□□□□ -0.4
LINC01440-203ENST00000596828 XDHP47989 1333 aa12.55□□□□□ -0.4
LINC01440-203ENST00000596828 FOXO4P98177 505 aa12.54□□□□□ -0.4
LINC01440-203ENST00000596828 CNTROBQ8N137 903 aa12.54□□□□□ -0.4
LINC01440-203ENST00000596828 KLRG1Q96E93 195 aa12.54□□□□□ -0.4
LINC01440-203ENST00000596828 MPHOSPH8Q99549 860 aa12.54□□□□□ -0.4
LINC01440-203ENST00000596828 PLA2G12BQ9BX93 195 aa12.54□□□□□ -0.4
LINC01440-203ENST00000596828 BSDC1Q9NW68 430 aaPredicted RBP12.54□□□□□ -0.4
LINC01440-203ENST00000596828 MINPP1Q9UNW1 487 aa12.54□□□□□ -0.4
LINC01440-203ENST00000596828 PCDHB13Q9Y5F0 798 aa12.54□□□□□ -0.4
LINC01440-203ENST00000596828 RTL9Q8NET4 1388 aa12.54□□□□□ -0.4
LINC01440-203ENST00000596828 ANKRD18BA2A2Z9 1011 aa12.53□□□□□ -0.4
LINC01440-203ENST00000596828 GRM8O00222 908 aa12.53□□□□□ -0.4
LINC01440-203ENST00000596828 ITGBL1O95965 494 aaPredicted RBP12.53□□□□□ -0.4
LINC01440-203ENST00000596828 CSF1RP07333 972 aa12.53□□□□□ -0.4
LINC01440-203ENST00000596828 ATP2B4P23634 1241 aa12.53□□□□□ -0.4
LINC01440-203ENST00000596828 FMR1Q06787 632 aaKnown RBP eCLIP12.53□□□□□ -0.4
LINC01440-203ENST00000596828 EPHA10Q5JZY3 1008 aa12.53□□□□□ -0.4
LINC01440-203ENST00000596828 LMBR1LQ6UX01 489 aa12.53□□□□□ -0.4
LINC01440-203ENST00000596828 USP50Q70EL3 339 aaPredicted RBP12.53□□□□□ -0.4
LINC01440-203ENST00000596828 ADARB2Q9NS39 739 aaKnown RBP12.53□□□□□ -0.4
LINC01440-203ENST00000596828 SMC4Q9NTJ3 1288 aa12.53□□□□□ -0.4
LINC01440-203ENST00000596828 CNOT7Q9UIV1 285 aaKnown RBP12.53□□□□□ -0.4
LINC01440-203ENST00000596828 ALDH1L1O75891 902 aa12.52□□□□□ -0.41
LINC01440-203ENST00000596828 CCT4P50991 539 aaKnown RBP12.52□□□□□ -0.41
LINC01440-203ENST00000596828 IFIT5Q13325 482 aaKnown RBP12.52□□□□□ -0.41
LINC01440-203ENST00000596828 RBM26Q5T8P6 1007 aaKnown RBP12.52□□□□□ -0.41
LINC01440-203ENST00000596828 MICALL2Q8IY33 904 aa12.52□□□□□ -0.41
LINC01440-203ENST00000596828 HELBQ8NG08 1087 aaPredicted RBP12.52□□□□□ -0.41
LINC01440-203ENST00000596828 FBXW7Q969H0 707 aa12.52□□□□□ -0.41
LINC01440-203ENST00000596828 ZNF594Q96JF6 807 aaPredicted RBP12.52□□□□□ -0.41
LINC01440-203ENST00000596828 MKRN1Q9UHC7 482 aaKnown RBP12.52□□□□□ -0.41
LINC01440-203ENST00000596828 PASKQ96RG2 1323 aa12.52□□□□□ -0.41
LINC01440-203ENST00000596828 ZNF646O15015 1829 aaPredicted RBP12.51□□□□□ -0.41
LINC01440-203ENST00000596828 H7C1D1 291 aa12.51□□□□□ -0.41
LINC01440-203ENST00000596828 TRAF5O00463 557 aa12.51□□□□□ -0.41
LINC01440-203ENST00000596828 PLIN1O60240 522 aa12.51□□□□□ -0.41
LINC01440-203ENST00000596828 TAF5LO75529 589 aa12.51□□□□□ -0.41
LINC01440-203ENST00000596828 NBPF7P0C2Y1 421 aaPredicted RBP12.51□□□□□ -0.41
LINC01440-203ENST00000596828 TBC1D10BQ4KMP7 808 aaPredicted RBP12.51□□□□□ -0.41
LINC01440-203ENST00000596828 TAF7LQ5H9L4 462 aa12.51□□□□□ -0.41
LINC01440-203ENST00000596828 SAMD7Q7Z3H4 446 aa12.51□□□□□ -0.41
LINC01440-203ENST00000596828 TRMT2AQ8IZ69 625 aaKnown RBP12.51□□□□□ -0.41
LINC01440-203ENST00000596828 TRPM4Q8TD43 1214 aa12.51□□□□□ -0.41
LINC01440-203ENST00000596828 SUCLG2Q96I99 432 aa12.51□□□□□ -0.41
LINC01440-203ENST00000596828 TMEM88BA6NKF7 163 aa12.5□□□□□ -0.41
LINC01440-203ENST00000596828 SNAP23O00161 211 aa12.5□□□□□ -0.41
LINC01440-203ENST00000596828 GTPBP6O43824 516 aaPredicted RBP12.5□□□□□ -0.41
LINC01440-203ENST00000596828 KLRK1P26718 216 aa12.5□□□□□ -0.41
LINC01440-203ENST00000596828 KCNJ4P48050 445 aa12.5□□□□□ -0.41
LINC01440-203ENST00000596828 HIRAP54198 1017 aaPredicted RBP12.5□□□□□ -0.41
LINC01440-203ENST00000596828 CHRNDQ07001 517 aa12.5□□□□□ -0.41
LINC01440-203ENST00000596828 CCDC57Q2TAC2 916 aa12.5□□□□□ -0.41
LINC01440-203ENST00000596828 TXNRD3Q86VQ6 643 aa12.5□□□□□ -0.41
LINC01440-203ENST00000596828 PTPRCP08575 1304 aa12.5□□□□□ -0.41
LINC01440-203ENST00000596828 ZNF804BA4D1E1 1349 aa12.49□□□□□ -0.41
LINC01440-203ENST00000596828 ATMINO43313 823 aaPredicted RBP12.49□□□□□ -0.41
LINC01440-203ENST00000596828 EGFRP00533 1210 aa12.49□□□□□ -0.41
LINC01440-203ENST00000596828 HNRNPUQ00839 825 aaKnown RBP eCLIP12.49□□□□□ -0.41
LINC01440-203ENST00000596828 ALDH1L2Q3SY69 923 aa12.49□□□□□ -0.41
LINC01440-203ENST00000596828 ANKRD2Q9GZV1 360 aa12.49□□□□□ -0.41
LINC01440-203ENST00000596828 MED23Q9ULK4 1368 aa12.48□□□□□ -0.41
LINC01440-203ENST00000596828 VIL1P09327 827 aaKnown RBP12.48□□□□□ -0.41
LINC01440-203ENST00000596828 ASTLQ6HA08 431 aaPredicted RBP12.48□□□□□ -0.41
LINC01440-203ENST00000596828 LDHAL6AQ6ZMR3 332 aa12.48□□□□□ -0.41
LINC01440-203ENST00000596828 DPF2Q92785 391 aa12.48□□□□□ -0.41
LINC01440-203ENST00000596828 KAZALD1Q96I82 304 aa12.48□□□□□ -0.41
LINC01440-203ENST00000596828 MXD3Q9BW11 206 aa12.48□□□□□ -0.41
LINC01440-203ENST00000596828 GLIS2Q9BZE0 524 aaPredicted RBP12.48□□□□□ -0.41
LINC01440-203ENST00000596828 BICC1Q9H694 974 aaKnown RBP12.48□□□□□ -0.41
LINC01440-203ENST00000596828 ZNF408Q9H9D4 720 aa12.48□□□□□ -0.41
LINC01440-203ENST00000596828 CNNM1Q9NRU3 951 aa12.48□□□□□ -0.41
LINC01440-203ENST00000596828 ABT1Q9ULW3 272 aaKnown RBP12.48□□□□□ -0.41
LINC01440-203ENST00000596828 NOB1Q9ULX3 412 aaKnown RBP12.48□□□□□ -0.41
LINC01440-203ENST00000596828 LEMD3Q9Y2U8 911 aa12.48□□□□□ -0.41
LINC01440-203ENST00000596828 USP17L3A6NCW0 530 aa12.47□□□□□ -0.41
LINC01440-203ENST00000596828 USP17L4A6NCW7 530 aa12.47□□□□□ -0.41
LINC01440-203ENST00000596828 RPS12P25398 132 aaKnown RBP12.47□□□□□ -0.41
LINC01440-203ENST00000596828 DLK2Q6UY11 383 aa12.47□□□□□ -0.41
LINC01440-203ENST00000596828 USP17L1Q7RTZ2 530 aa12.47□□□□□ -0.41
LINC01440-203ENST00000596828 TRPC6Q9Y210 931 aa12.47□□□□□ -0.41
LINC01440-203ENST00000596828 GRM1Q13255 1194 aa12.46□□□□□ -0.41
LINC01440-203ENST00000596828 RSBN1LQ6PCB5 846 aaPredicted RBP12.46□□□□□ -0.41
LINC01440-203ENST00000596828 PODNQ7Z5L7 613 aa12.46□□□□□ -0.41
LINC01440-203ENST00000596828 USP48Q86UV5 1035 aa12.46□□□□□ -0.41
LINC01440-203ENST00000596828 JMYQ8N9B5 988 aa12.46□□□□□ -0.41
LINC01440-203ENST00000596828 PUS3Q9BZE2 481 aaKnown RBP12.46□□□□□ -0.41
LINC01440-203ENST00000596828 PCNTO95613 3336 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms