RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 MXD3Q9BW11 206 aa20.39■□□□□ 0.85
LINC02560-201ENST00000596379 IL16Q14005 1332 aa20.38■□□□□ 0.85
LINC02560-201ENST00000596379 IGHMBP2P38935 993 aaKnown RBP20.38■□□□□ 0.85
LINC02560-201ENST00000596379 DGKZQ13574 1117 aa20.38■□□□□ 0.85
LINC02560-201ENST00000596379 GCKRQ14397 625 aa20.38■□□□□ 0.85
LINC02560-201ENST00000596379 SCAF8Q9UPN6 1271 aaKnown RBP20.38■□□□□ 0.85
LINC02560-201ENST00000596379 PITPNM2Q9BZ72 1349 aa20.37■□□□□ 0.85
LINC02560-201ENST00000596379 SLC10A3P09131 477 aa20.37■□□□□ 0.85
LINC02560-201ENST00000596379 FLIIQ13045 1269 aa20.37■□□□□ 0.85
LINC02560-201ENST00000596379 FAM161AQ3B820 660 aa20.37■□□□□ 0.85
LINC02560-201ENST00000596379 DACT2Q5SW24 774 aa20.37■□□□□ 0.85
LINC02560-201ENST00000596379 TXNRD3Q86VQ6 643 aa20.37■□□□□ 0.85
LINC02560-201ENST00000596379 FBXW7Q969H0 707 aa20.37■□□□□ 0.85
LINC02560-201ENST00000596379 PLA2G12BQ9BX93 195 aa20.37■□□□□ 0.85
LINC02560-201ENST00000596379 COA1Q9GZY4 146 aa20.37■□□□□ 0.85
LINC02560-201ENST00000596379 RNF186Q9NXI6 227 aa20.37■□□□□ 0.85
LINC02560-201ENST00000596379 LEMD3Q9Y2U8 911 aa20.37■□□□□ 0.85
LINC02560-201ENST00000596379 AKAP11Q9UKA4 1901 aa20.37■□□□□ 0.85
LINC02560-201ENST00000596379 TRPA1O75762 1119 aa20.36■□□□□ 0.85
LINC02560-201ENST00000596379 ITGA6P23229 1130 aa20.36■□□□□ 0.85
LINC02560-201ENST00000596379 FKBP5Q13451 457 aaPredicted RBP20.36■□□□□ 0.85
LINC02560-201ENST00000596379 NBPF9Q3BBW0 867 aa20.36■□□□□ 0.85
LINC02560-201ENST00000596379 DNAAF4Q8WXU2 420 aa20.36■□□□□ 0.85
LINC02560-201ENST00000596379 CSRNP1Q96S65 589 aa20.36■□□□□ 0.85
LINC02560-201ENST00000596379 SAGE1Q9NXZ1 904 aa20.36■□□□□ 0.85
LINC02560-201ENST00000596379 CASP7P55210 303 aa20.35■□□□□ 0.85
LINC02560-201ENST00000596379 FKBP1BP68106 108 aa20.35■□□□□ 0.85
LINC02560-201ENST00000596379 NCBP3Q53F19 620 aaKnown RBP20.35■□□□□ 0.85
LINC02560-201ENST00000596379 STRIP1Q5VSL9 837 aa20.35■□□□□ 0.85
LINC02560-201ENST00000596379 OGFOD1Q8N543 542 aa20.35■□□□□ 0.85
LINC02560-201ENST00000596379 MPHOSPH8Q99549 860 aa20.35■□□□□ 0.85
LINC02560-201ENST00000596379 ANKRD2Q9GZV1 360 aa20.35■□□□□ 0.85
LINC02560-201ENST00000596379 MYH16Q9H6N6 1097 aa20.35■□□□□ 0.85
LINC02560-201ENST00000596379 SALL2Q9Y467 1007 aaPredicted RBP20.35■□□□□ 0.85
LINC02560-201ENST00000596379 CACNA1FO60840 1977 aa20.35■□□□□ 0.85
LINC02560-201ENST00000596379 ZNF804BA4D1E1 1349 aa20.34■□□□□ 0.85
LINC02560-201ENST00000596379 FANCIQ9NVI1 1328 aa20.34■□□□□ 0.85
LINC02560-201ENST00000596379 VAMP4O75379 141 aa20.34■□□□□ 0.85
LINC02560-201ENST00000596379 CSF1RP07333 972 aa20.34■□□□□ 0.85
LINC02560-201ENST00000596379 RGS19P49795 217 aa20.34■□□□□ 0.85
LINC02560-201ENST00000596379 PRAMEF18Q5VWM3 479 aa20.34■□□□□ 0.85
LINC02560-201ENST00000596379 MOB2Q70IA6 237 aa20.34■□□□□ 0.85
LINC02560-201ENST00000596379 RASAL3Q86YV0 1011 aa20.34■□□□□ 0.85
LINC02560-201ENST00000596379 LINS1Q8NG48 757 aa20.34■□□□□ 0.85
LINC02560-201ENST00000596379 MRS2Q9HD23 443 aa20.34■□□□□ 0.85
LINC02560-201ENST00000596379 ZNF646O15015 1829 aaPredicted RBP20.34■□□□□ 0.85
LINC02560-201ENST00000596379 MYO3BQ8WXR4 1341 aa20.33■□□□□ 0.85
LINC02560-201ENST00000596379 KLRK1P26718 216 aa20.33■□□□□ 0.85
LINC02560-201ENST00000596379 TTLL5Q6EMB2 1281 aa20.33■□□□□ 0.85
LINC02560-201ENST00000596379 UBE2Q2LH0YL09 131 aa20.32■□□□□ 0.84
LINC02560-201ENST00000596379 WNT10BO00744 389 aa20.32■□□□□ 0.84
LINC02560-201ENST00000596379 MLLT1Q03111 559 aaPredicted RBP20.32■□□□□ 0.84
LINC02560-201ENST00000596379 PAPPA2Q9BXP8 1791 aa20.31■□□□□ 0.84
LINC02560-201ENST00000596379 EXOSC9Q06265 439 aaKnown RBP20.31■□□□□ 0.84
LINC02560-201ENST00000596379 CHRNDQ07001 517 aa20.31■□□□□ 0.84
LINC02560-201ENST00000596379 WDR63Q8IWG1 891 aa20.31■□□□□ 0.84
LINC02560-201ENST00000596379 REM2Q8IYK8 340 aaPredicted RBP20.31■□□□□ 0.84
LINC02560-201ENST00000596379 ANKRD18BA2A2Z9 1011 aa20.3■□□□□ 0.84
LINC02560-201ENST00000596379 SASH1O94885 1247 aa20.3■□□□□ 0.84
LINC02560-201ENST00000596379 KCNJ4P48050 445 aa20.3■□□□□ 0.84
LINC02560-201ENST00000596379 MMP14P50281 582 aa20.29■□□□□ 0.84
LINC02560-201ENST00000596379 GTF2IP78347 998 aa20.29■□□□□ 0.84
LINC02560-201ENST00000596379 TTLL12Q14166 644 aaPredicted RBP20.29■□□□□ 0.84
LINC02560-201ENST00000596379 KIAA0825Q8IV33 1275 aa20.29■□□□□ 0.84
LINC02560-201ENST00000596379 F6X3S4 739 aa20.28■□□□□ 0.84
LINC02560-201ENST00000596379 SNAP23O00161 211 aa20.28■□□□□ 0.84
LINC02560-201ENST00000596379 TAF5LO75529 589 aa20.28■□□□□ 0.84
LINC02560-201ENST00000596379 FOXO4P98177 505 aa20.28■□□□□ 0.84
LINC02560-201ENST00000596379 CD209Q9NNX6 404 aa20.28■□□□□ 0.84
LINC02560-201ENST00000596379 HDAC9Q9UKV0 1011 aa20.28■□□□□ 0.84
LINC02560-201ENST00000596379 IFIT5Q13325 482 aaKnown RBP20.27■□□□□ 0.84
LINC02560-201ENST00000596379 HELBQ8NG08 1087 aaPredicted RBP20.27■□□□□ 0.84
LINC02560-201ENST00000596379 CHMP3Q9Y3E7 222 aa20.27■□□□□ 0.84
LINC02560-201ENST00000596379 ANP32CO43423 234 aa20.26■□□□□ 0.83
LINC02560-201ENST00000596379 NF2P35240 595 aa20.26■□□□□ 0.83
LINC02560-201ENST00000596379 BEND3Q5T5X7 828 aa20.26■□□□□ 0.83
LINC02560-201ENST00000596379 ZBED3Q96IU2 234 aaPredicted RBP20.26■□□□□ 0.83
LINC02560-201ENST00000596379 SPINK5Q9NQ38 1064 aaPredicted RBP20.26■□□□□ 0.83
LINC02560-201ENST00000596379 IRS2Q9Y4H2 1338 aa20.25■□□□□ 0.83
LINC02560-201ENST00000596379 PRKG1Q13976 671 aa20.24■□□□□ 0.83
LINC02560-201ENST00000596379 C15orf52Q6ZUT6 534 aaKnown RBP20.24■□□□□ 0.83
LINC02560-201ENST00000596379 APOBEC3FQ8IUX4 373 aaKnown RBP20.24■□□□□ 0.83
LINC02560-201ENST00000596379 PTPN12Q05209 780 aaKnown RBP20.23■□□□□ 0.83
LINC02560-201ENST00000596379 MKRN3Q13064 507 aaKnown RBP20.23■□□□□ 0.83
LINC02560-201ENST00000596379 EPHA10Q5JZY3 1008 aa20.23■□□□□ 0.83
LINC02560-201ENST00000596379 LMBR1LQ6UX01 489 aa20.23■□□□□ 0.83
LINC02560-201ENST00000596379 CTU1Q7Z7A3 348 aaKnown RBP20.23■□□□□ 0.83
LINC02560-201ENST00000596379 CERS5Q8N5B7 392 aa20.23■□□□□ 0.83
LINC02560-201ENST00000596379 TBC1D8O95759 1140 aa20.22■□□□□ 0.83
LINC02560-201ENST00000596379 TM4SF4P48230 202 aa20.22■□□□□ 0.83
LINC02560-201ENST00000596379 DLGAP5Q15398 846 aa20.22■□□□□ 0.83
LINC02560-201ENST00000596379 ARMC9Q7Z3E5 817 aa20.22■□□□□ 0.83
LINC02560-201ENST00000596379 ZNF594Q96JF6 807 aaPredicted RBP20.22■□□□□ 0.83
LINC02560-201ENST00000596379 A0A1B0GUL6 1792 aa20.21■□□□□ 0.83
LINC02560-201ENST00000596379 GRM8O00222 908 aa20.21■□□□□ 0.83
LINC02560-201ENST00000596379 PLIN1O60240 522 aa20.21■□□□□ 0.83
LINC02560-201ENST00000596379 IL1R1P14778 569 aa20.21■□□□□ 0.83
LINC02560-201ENST00000596379 ZNF804AQ7Z570 1209 aa20.21■□□□□ 0.83
LINC02560-201ENST00000596379 F8W031 263 aaPredicted RBP20.2■□□□□ 0.82
LINC02560-201ENST00000596379 CCDC57Q2TAC2 916 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms