RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 ATP5JP18859 108 aa18.04■□□□□ 0.48
ZNF541-205ENST00000595558 IFFO2Q5TF58 517 aa18.04■□□□□ 0.48
ZNF541-205ENST00000595558 ZSCAN25Q6NSZ9 544 aa18.04■□□□□ 0.48
ZNF541-205ENST00000595558 CWC25Q9NXE8 425 aaPredicted RBP18.04■□□□□ 0.48
ZNF541-205ENST00000595558 TPM3P06753 285 aa18.04■□□□□ 0.48
ZNF541-205ENST00000595558 C11orf57Q6ZUT1 292 aaPredicted RBP18.04■□□□□ 0.48
ZNF541-205ENST00000595558 CACTINQ8WUQ7 758 aaKnown RBP18.04■□□□□ 0.48
ZNF541-205ENST00000595558 ERCC4Q92889 916 aaPredicted RBP18.04■□□□□ 0.48
ZNF541-205ENST00000595558 DNAJC5Q9H3Z4 198 aa18.04■□□□□ 0.48
ZNF541-205ENST00000595558 TDRD7Q8NHU6 1098 aaKnown RBP18.03■□□□□ 0.48
ZNF541-205ENST00000595558 CPDO75976 1380 aa18.03■□□□□ 0.48
ZNF541-205ENST00000595558 MRC1P22897 1456 aa18.03■□□□□ 0.48
ZNF541-205ENST00000595558 ADORA1P30542 326 aa18.03■□□□□ 0.48
ZNF541-205ENST00000595558 ADD1P35611 737 aaKnown RBP18.03■□□□□ 0.48
ZNF541-205ENST00000595558 NAA30Q147X3 362 aaPredicted RBP18.03■□□□□ 0.48
ZNF541-205ENST00000595558 HLFQ16534 295 aa18.03■□□□□ 0.48
ZNF541-205ENST00000595558 GOLPH3LQ9H4A5 285 aa18.03■□□□□ 0.48
ZNF541-205ENST00000595558 SOS2Q07890 1332 aaPredicted RBP18.03■□□□□ 0.48
ZNF541-205ENST00000595558 CTDNEP1O95476 244 aa18.02■□□□□ 0.48
ZNF541-205ENST00000595558 CCT2P78371 535 aaKnown RBP18.02■□□□□ 0.48
ZNF541-205ENST00000595558 SMAP1Q8IYB5 467 aaPredicted RBP18.02■□□□□ 0.48
ZNF541-205ENST00000595558 KLHL34Q8N239 644 aa18.02■□□□□ 0.48
ZNF541-205ENST00000595558 COL5A2P05997 1499 aaPredicted RBP18.02■□□□□ 0.48
ZNF541-205ENST00000595558 APOBRQ0VD83 1088 aa18.02■□□□□ 0.48
ZNF541-205ENST00000595558 CHAF1AQ13111 956 aaPredicted RBP18.02■□□□□ 0.48
ZNF541-205ENST00000595558 NCOA5Q9HCD5 579 aaKnown RBP18.02■□□□□ 0.48
ZNF541-205ENST00000595558 FGD1P98174 961 aa18.02■□□□□ 0.47
ZNF541-205ENST00000595558 GUCY1B3Q02153 619 aa18.02■□□□□ 0.47
ZNF541-205ENST00000595558 FKBP4Q02790 459 aaKnown RBP eCLIP18.02■□□□□ 0.47
ZNF541-205ENST00000595558 TMOD3Q9NYL9 352 aa18.02■□□□□ 0.47
ZNF541-205ENST00000595558 CLIP2Q9UDT6 1046 aa18.02■□□□□ 0.47
ZNF541-205ENST00000595558 U2AF2P26368 475 aaKnown RBP eCLIP18.01■□□□□ 0.47
ZNF541-205ENST00000595558 TTLL5Q6EMB2 1281 aa18.01■□□□□ 0.47
ZNF541-205ENST00000595558 PDCL2Q8N4E4 241 aa18.01■□□□□ 0.47
ZNF541-205ENST00000595558 FBXW7Q969H0 707 aa18.01■□□□□ 0.47
ZNF541-205ENST00000595558 SLC4A9Q96Q91 983 aa18.01■□□□□ 0.47
ZNF541-205ENST00000595558 KRT32Q14532 448 aa18.01■□□□□ 0.47
ZNF541-205ENST00000595558 MCMDC2Q4G0Z9 681 aa18.01■□□□□ 0.47
ZNF541-205ENST00000595558 CARD10Q9BWT7 1032 aa18.01■□□□□ 0.47
ZNF541-205ENST00000595558 PDIA4P13667 645 aaKnown RBP18■□□□□ 0.47
ZNF541-205ENST00000595558 ZSCAN20P17040 1043 aaPredicted RBP18■□□□□ 0.47
ZNF541-205ENST00000595558 SCARF1Q14162 830 aa18■□□□□ 0.47
ZNF541-205ENST00000595558 IQCB1Q15051 598 aa18■□□□□ 0.47
ZNF541-205ENST00000595558 NSUN7Q8NE18 718 aaKnown RBP18■□□□□ 0.47
ZNF541-205ENST00000595558 TAOK2Q9UL54 1235 aa18■□□□□ 0.47
ZNF541-205ENST00000595558 DCCP43146 1447 aa18■□□□□ 0.47
ZNF541-205ENST00000595558 ERVV-2B6SEH9 535 aa18■□□□□ 0.47
ZNF541-205ENST00000595558 SNAP23O00161 211 aa18■□□□□ 0.47
ZNF541-205ENST00000595558 CTIFO43310 598 aaKnown RBP18■□□□□ 0.47
ZNF541-205ENST00000595558 NAP1L2Q9ULW6 460 aaPredicted RBP18■□□□□ 0.47
ZNF541-205ENST00000595558 XIRP1Q702N8 1843 aaKnown RBP17.99■□□□□ 0.47
ZNF541-205ENST00000595558 A0A1B0GUL7 405 aa17.99■□□□□ 0.47
ZNF541-205ENST00000595558 CCAR1Q8IX12 1150 aaKnown RBP17.99■□□□□ 0.47
ZNF541-205ENST00000595558 ANKRD7Q92527 254 aa17.99■□□□□ 0.47
ZNF541-205ENST00000595558 USP28Q96RU2 1077 aa17.99■□□□□ 0.47
ZNF541-205ENST00000595558 HAUS7Q99871 368 aa17.99■□□□□ 0.47
ZNF541-205ENST00000595558 ZHX1Q9UKY1 873 aaPredicted RBP17.99■□□□□ 0.47
ZNF541-205ENST00000595558 U3KPZ7 1027 aaPredicted RBP17.99■□□□□ 0.47
ZNF541-205ENST00000595558 USP27XA6NNY8 438 aa17.99■□□□□ 0.47
ZNF541-205ENST00000595558 SMARCC2Q8TAQ2 1214 aa17.99■□□□□ 0.47
ZNF541-205ENST00000595558 GPHNQ9NQX3 736 aaPredicted RBP17.99■□□□□ 0.47
ZNF541-205ENST00000595558 ATG3Q9NT62 314 aa17.99■□□□□ 0.47
ZNF541-205ENST00000595558 TBC1D2BQ9UPU7 963 aa17.99■□□□□ 0.47
ZNF541-205ENST00000595558 AFDNP55196 1824 aaKnown RBP17.98■□□□□ 0.47
ZNF541-205ENST00000595558 PTPDC1A2A3K4 754 aa17.98■□□□□ 0.47
ZNF541-205ENST00000595558 TNNT1P13805 278 aa17.98■□□□□ 0.47
ZNF541-205ENST00000595558 GLI3P10071 1580 aa17.98■□□□□ 0.47
ZNF541-205ENST00000595558 NCBP1Q09161 790 aaKnown RBP17.98■□□□□ 0.47
ZNF541-205ENST00000595558 SNW1Q13573 536 aaKnown RBP17.98■□□□□ 0.47
ZNF541-205ENST00000595558 PFKFB2O60825 505 aa17.97■□□□□ 0.47
ZNF541-205ENST00000595558 ILDR1Q86SU0 546 aaPredicted RBP17.97■□□□□ 0.47
ZNF541-205ENST00000595558 RAB11FIP4Q86YS3 637 aa17.97■□□□□ 0.47
ZNF541-205ENST00000595558 PAG1Q9NWQ8 432 aa17.97■□□□□ 0.47
ZNF541-205ENST00000595558 HAND2P61296 217 aa17.97■□□□□ 0.47
ZNF541-205ENST00000595558 ZSCAN16Q9H4T2 348 aaPredicted RBP17.97■□□□□ 0.47
ZNF541-205ENST00000595558 CFAP45Q9UL16 551 aa17.97■□□□□ 0.47
ZNF541-205ENST00000595558 EYA2O00167 538 aa17.96■□□□□ 0.47
ZNF541-205ENST00000595558 ARFGEF2Q9Y6D5 1785 aa17.96■□□□□ 0.47
ZNF541-205ENST00000595558 TPD52L1Q16890 204 aaPredicted RBP17.96■□□□□ 0.47
ZNF541-205ENST00000595558 DHX32Q7L7V1 743 aaKnown RBP17.96■□□□□ 0.47
ZNF541-205ENST00000595558 KBTBD3Q8NAB2 608 aa17.96■□□□□ 0.47
ZNF541-205ENST00000595558 ZNF592Q92610 1267 aa17.96■□□□□ 0.47
ZNF541-205ENST00000595558 RCOR1Q9UKL0 485 aa17.96■□□□□ 0.47
ZNF541-205ENST00000595558 NKX1-1Q15270 411 aaPredicted RBP17.95■□□□□ 0.46
ZNF541-205ENST00000595558 OTUD7BQ6GQQ9 843 aa17.95■□□□□ 0.46
ZNF541-205ENST00000595558 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.95■□□□□ 0.46
ZNF541-205ENST00000595558 HELBQ8NG08 1087 aaPredicted RBP17.95■□□□□ 0.46
ZNF541-205ENST00000595558 ADAMTS2O95450 1211 aa17.95■□□□□ 0.46
ZNF541-205ENST00000595558 IFIT1P09914 478 aaKnown RBP17.95■□□□□ 0.46
ZNF541-205ENST00000595558 LRRC8AQ8IWT6 810 aa17.95■□□□□ 0.46
ZNF541-205ENST00000595558 CCDC191Q8NCU4 936 aa17.95■□□□□ 0.46
ZNF541-205ENST00000595558 KCPQ6ZWJ8 1503 aa17.95■□□□□ 0.46
ZNF541-205ENST00000595558 GOLGA6L19H0YKK7 550 aa17.94■□□□□ 0.46
ZNF541-205ENST00000595558 M0R2C6 588 aa17.94■□□□□ 0.46
ZNF541-205ENST00000595558 TCIRG1Q13488 830 aa17.94■□□□□ 0.46
ZNF541-205ENST00000595558 SMIM5Q71RC9 77 aa17.94■□□□□ 0.46
ZNF541-205ENST00000595558 FILIP1Q7Z7B0 1213 aa17.94■□□□□ 0.46
ZNF541-205ENST00000595558 DHX40Q8IX18 779 aaKnown RBP17.94■□□□□ 0.46
ZNF541-205ENST00000595558 ACSBG1Q96GR2 724 aa17.94■□□□□ 0.46
ZNF541-205ENST00000595558 ZBTB1Q9Y2K1 713 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms