RNA–Protein interactions for RNA: ENST00000595452.1

TMEM38A-202, Transcript of transmembrane protein 38A, humanhuman

TSL 2

Gene TMEM38A, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-202ENST00000595452 POTEIP0CG38 1075 aa17.04■□□□□ 0.32
TMEM38A-202ENST00000595452 POTEJP0CG39 1038 aa17.04■□□□□ 0.32
TMEM38A-202ENST00000595452 UBE4AQ14139 1066 aa17.04■□□□□ 0.32
TMEM38A-202ENST00000595452 RSBN1LQ6PCB5 846 aaPredicted RBP17.04■□□□□ 0.32
TMEM38A-202ENST00000595452 C15orf52Q6ZUT6 534 aaKnown RBP17.04■□□□□ 0.32
TMEM38A-202ENST00000595452 HELBQ8NG08 1087 aaPredicted RBP17.04■□□□□ 0.32
TMEM38A-202ENST00000595452 CLUAP1Q96AJ1 413 aa17.04■□□□□ 0.32
TMEM38A-202ENST00000595452 FBXO3Q9UK99 471 aa17.04■□□□□ 0.32
TMEM38A-202ENST00000595452 ZBTB12Q9Y330 459 aaPredicted RBP17.04■□□□□ 0.32
TMEM38A-202ENST00000595452 MMP14P50281 582 aa17.03■□□□□ 0.32
TMEM38A-202ENST00000595452 STRIP1Q5VSL9 837 aa17.03■□□□□ 0.32
TMEM38A-202ENST00000595452 DZIP1LQ8IYY4 767 aaKnown RBP17.03■□□□□ 0.32
TMEM38A-202ENST00000595452 OGFOD1Q8N543 542 aa17.03■□□□□ 0.32
TMEM38A-202ENST00000595452 ZC3H15Q8WU90 426 aaKnown RBP17.03■□□□□ 0.32
TMEM38A-202ENST00000595452 MEIS3Q99687 375 aa17.03■□□□□ 0.32
TMEM38A-202ENST00000595452 LRRFIP2Q9Y608 721 aaKnown RBP17.03■□□□□ 0.32
TMEM38A-202ENST00000595452 GNAI2P04899 355 aa17.02■□□□□ 0.32
TMEM38A-202ENST00000595452 CAVIN4Q5BKX8 364 aa17.02■□□□□ 0.32
TMEM38A-202ENST00000595452 VPS37DQ86XT2 251 aa17.02■□□□□ 0.32
TMEM38A-202ENST00000595452 CNTROBQ8N137 903 aa17.02■□□□□ 0.32
TMEM38A-202ENST00000595452 TRPM7Q96QT4 1865 aa17.01■□□□□ 0.31
TMEM38A-202ENST00000595452 ITPRIPQ8IWB1 547 aa17.01■□□□□ 0.31
TMEM38A-202ENST00000595452 HDAC9Q9UKV0 1011 aa17.01■□□□□ 0.31
TMEM38A-202ENST00000595452 RIPOR2Q9Y4F9 1068 aa17.01■□□□□ 0.31
TMEM38A-202ENST00000595452 MYH13Q9UKX3 1938 aa17■□□□□ 0.31
TMEM38A-202ENST00000595452 EYA2O00167 538 aa17■□□□□ 0.31
TMEM38A-202ENST00000595452 PDE8BO95263 885 aa17■□□□□ 0.31
TMEM38A-202ENST00000595452 USP17L8P0C7I0 530 aa17■□□□□ 0.31
TMEM38A-202ENST00000595452 PUM3Q15397 648 aaKnown RBP17■□□□□ 0.31
TMEM38A-202ENST00000595452 KIF4BQ2VIQ3 1234 aa17■□□□□ 0.31
TMEM38A-202ENST00000595452 MAP1SQ66K74 1059 aaPredicted RBP17■□□□□ 0.31
TMEM38A-202ENST00000595452 TTLL5Q6EMB2 1281 aa17■□□□□ 0.31
TMEM38A-202ENST00000595452 TMEM57Q8N5G2 664 aa17■□□□□ 0.31
TMEM38A-202ENST00000595452 GOLGA6L2Q8N9W4 650 aaPredicted RBP17■□□□□ 0.31
TMEM38A-202ENST00000595452 CD209Q9NNX6 404 aa17■□□□□ 0.31
TMEM38A-202ENST00000595452 KCNQ5Q9NR82 932 aa17■□□□□ 0.31
TMEM38A-202ENST00000595452 CIAO1O76071 339 aa16.99■□□□□ 0.31
TMEM38A-202ENST00000595452 IFIT1P09914 478 aaKnown RBP16.99■□□□□ 0.31
TMEM38A-202ENST00000595452 TBC1D10BQ4KMP7 808 aaPredicted RBP16.99■□□□□ 0.31
TMEM38A-202ENST00000595452 TXNRD3Q86VQ6 643 aa16.99■□□□□ 0.31
TMEM38A-202ENST00000595452 PUS3Q9BZE2 481 aaKnown RBP16.99■□□□□ 0.31
TMEM38A-202ENST00000595452 CREBZFQ9NS37 354 aa16.99■□□□□ 0.31
TMEM38A-202ENST00000595452 RCAN3Q9UKA8 241 aa16.99■□□□□ 0.31
TMEM38A-202ENST00000595452 ZNF646O15015 1829 aaPredicted RBP16.98■□□□□ 0.31
TMEM38A-202ENST00000595452 TMEM88BA6NKF7 163 aa16.98■□□□□ 0.31
TMEM38A-202ENST00000595452 SRGAP3O43295 1099 aa16.98■□□□□ 0.31
TMEM38A-202ENST00000595452 FRAT2O75474 233 aaPredicted RBP16.98■□□□□ 0.31
TMEM38A-202ENST00000595452 SLC5A1P13866 664 aa16.98■□□□□ 0.31
TMEM38A-202ENST00000595452 KLRK1P26718 216 aa16.98■□□□□ 0.31
TMEM38A-202ENST00000595452 HIBADHP31937 336 aaKnown RBP16.98■□□□□ 0.31
TMEM38A-202ENST00000595452 GTF2IP78347 998 aa16.98■□□□□ 0.31
TMEM38A-202ENST00000595452 PTPN12Q05209 780 aaKnown RBP16.98■□□□□ 0.31
TMEM38A-202ENST00000595452 LRRC24Q50LG9 513 aa16.98■□□□□ 0.31
TMEM38A-202ENST00000595452 DACT2Q5SW24 774 aa16.98■□□□□ 0.31
TMEM38A-202ENST00000595452 KLHDC4Q8TBB5 520 aa16.98■□□□□ 0.31
TMEM38A-202ENST00000595452 DCPSQ96C86 337 aaKnown RBP16.98■□□□□ 0.31
TMEM38A-202ENST00000595452 CHMP4BQ9H444 224 aaKnown RBP16.98■□□□□ 0.31
TMEM38A-202ENST00000595452 ARAP2Q8WZ64 1704 aa16.98■□□□□ 0.31
TMEM38A-202ENST00000595452 PASKQ96RG2 1323 aa16.97■□□□□ 0.31
TMEM38A-202ENST00000595452 WTIPA6NIX2 430 aaPredicted RBP16.97■□□□□ 0.31
TMEM38A-202ENST00000595452 IL1R1P14778 569 aa16.97■□□□□ 0.31
TMEM38A-202ENST00000595452 IL15P40933 162 aaPredicted RBP16.97■□□□□ 0.31
TMEM38A-202ENST00000595452 MTX1Q13505 466 aa16.97■□□□□ 0.31
TMEM38A-202ENST00000595452 RBM26Q5T8P6 1007 aaKnown RBP16.97■□□□□ 0.31
TMEM38A-202ENST00000595452 CDC37L1Q7L3B6 337 aa16.97■□□□□ 0.31
TMEM38A-202ENST00000595452 TRPM4Q8TD43 1214 aa16.97■□□□□ 0.31
TMEM38A-202ENST00000595452 SIL1Q9H173 461 aa16.97■□□□□ 0.31
TMEM38A-202ENST00000595452 MYOZ2Q9NPC6 264 aa16.97■□□□□ 0.31
TMEM38A-202ENST00000595452 CEP126Q9P2H0 1117 aa16.97■□□□□ 0.31
TMEM38A-202ENST00000595452 SNAP23O00161 211 aa16.96■□□□□ 0.31
TMEM38A-202ENST00000595452 ITGBL1O95965 494 aaPredicted RBP16.96■□□□□ 0.31
TMEM38A-202ENST00000595452 RFX5P48382 616 aaPredicted RBP16.96■□□□□ 0.31
TMEM38A-202ENST00000595452 ZNF280AP59817 542 aaPredicted RBP16.96■□□□□ 0.31
TMEM38A-202ENST00000595452 FKBP1AP62942 108 aaKnown RBP16.96■□□□□ 0.31
TMEM38A-202ENST00000595452 SAMD7Q7Z3H4 446 aa16.96■□□□□ 0.31
TMEM38A-202ENST00000595452 COPRSQ9NQ92 184 aa16.96■□□□□ 0.31
TMEM38A-202ENST00000595452 IRS2Q9Y4H2 1338 aa16.96■□□□□ 0.3
TMEM38A-202ENST00000595452 SULF1Q8IWU6 871 aa16.95■□□□□ 0.3
TMEM38A-202ENST00000595452 LPIN2Q92539 896 aa16.95■□□□□ 0.3
TMEM38A-202ENST00000595452 GMLQ99445 158 aa16.95■□□□□ 0.3
TMEM38A-202ENST00000595452 PGAP2Q9UHJ9 254 aa16.95■□□□□ 0.3
TMEM38A-202ENST00000595452 SASH1O94885 1247 aa16.94■□□□□ 0.3
TMEM38A-202ENST00000595452 GYG1P46976 350 aa16.94■□□□□ 0.3
TMEM38A-202ENST00000595452 ATP2B3Q16720 1220 aa16.94■□□□□ 0.3
TMEM38A-202ENST00000595452 VGLL2Q8N8G2 317 aa16.94■□□□□ 0.3
TMEM38A-202ENST00000595452 TBC1D22AQ8WUA7 517 aa16.94■□□□□ 0.3
TMEM38A-202ENST00000595452 TNNQ9UQP3 1299 aa16.94■□□□□ 0.3
TMEM38A-202ENST00000595452 ECM29Q5VYK3 1845 aa16.93■□□□□ 0.3
TMEM38A-202ENST00000595452 SHTN1A0MZ66 631 aa16.93■□□□□ 0.3
TMEM38A-202ENST00000595452 HIRAP54198 1017 aaPredicted RBP16.93■□□□□ 0.3
TMEM38A-202ENST00000595452 KRT26Q7Z3Y9 468 aa16.93■□□□□ 0.3
TMEM38A-202ENST00000595452 KIAA0825Q8IV33 1275 aa16.93■□□□□ 0.3
TMEM38A-202ENST00000595452 KLRG1Q96E93 195 aa16.93■□□□□ 0.3
TMEM38A-202ENST00000595452 GNL3LQ9NVN8 582 aaKnown RBP16.93■□□□□ 0.3
TMEM38A-202ENST00000595452 GGA3Q9NZ52 723 aa16.93■□□□□ 0.3
TMEM38A-202ENST00000595452 ABT1Q9ULW3 272 aaKnown RBP16.93■□□□□ 0.3
TMEM38A-202ENST00000595452 AKAP2Q9Y2D5 859 aa16.93■□□□□ 0.3
TMEM38A-202ENST00000595452 POLR2AP24928 1970 aaKnown RBP16.93■□□□□ 0.3
TMEM38A-202ENST00000595452 FAM205AQ6ZU69 1335 aa16.93■□□□□ 0.3
TMEM38A-202ENST00000595452 PITPNM2Q9BZ72 1349 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms