RNA–Protein interactions for RNA: ENST00000593827.1

COPE-204, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-204ENST00000593827 ADAMTSL1Q8N6G6 1762 aa25.13■■□□□ 1.61
COPE-204ENST00000593827 HTRA3P83110 453 aa25.13■■□□□ 1.61
COPE-204ENST00000593827 TAF5LO75529 589 aa25.12■■□□□ 1.61
COPE-204ENST00000593827 UBE4AQ14139 1066 aa25.12■■□□□ 1.61
COPE-204ENST00000593827 ANKRD44Q8N8A2 993 aa25.12■■□□□ 1.61
COPE-204ENST00000593827 HELBQ8NG08 1087 aaPredicted RBP25.12■■□□□ 1.61
COPE-204ENST00000593827 PLIN1O60240 522 aa25.11■■□□□ 1.61
COPE-204ENST00000593827 GNAI3P08754 354 aa25.11■■□□□ 1.61
COPE-204ENST00000593827 USP17L8P0C7I0 530 aa25.11■■□□□ 1.61
COPE-204ENST00000593827 INTS3Q68E01 1043 aaKnown RBP25.11■■□□□ 1.61
COPE-204ENST00000593827 ATF7IPQ6VMQ6 1270 aa25.11■■□□□ 1.61
COPE-204ENST00000593827 CDC37L1Q7L3B6 337 aa25.11■■□□□ 1.61
COPE-204ENST00000593827 OGFOD1Q8N543 542 aa25.11■■□□□ 1.61
COPE-204ENST00000593827 TRPM4Q8TD43 1214 aa25.11■■□□□ 1.61
COPE-204ENST00000593827 FRAT1Q92837 279 aaPredicted RBP25.11■■□□□ 1.61
COPE-204ENST00000593827 FBXW7Q969H0 707 aa25.11■■□□□ 1.61
COPE-204ENST00000593827 WTIPA6NIX2 430 aaPredicted RBP25.1■■□□□ 1.61
COPE-204ENST00000593827 KIF4BQ2VIQ3 1234 aa25.1■■□□□ 1.61
COPE-204ENST00000593827 TTLL5Q6EMB2 1281 aa25.1■■□□□ 1.61
COPE-204ENST00000593827 ZNF280AP59817 542 aaPredicted RBP25.09■■□□□ 1.61
COPE-204ENST00000593827 TBC1D10BQ4KMP7 808 aaPredicted RBP25.09■■□□□ 1.61
COPE-204ENST00000593827 SAMD7Q7Z3H4 446 aa25.09■■□□□ 1.61
COPE-204ENST00000593827 TXNRD3Q86VQ6 643 aa25.09■■□□□ 1.61
COPE-204ENST00000593827 DCPSQ96C86 337 aaKnown RBP25.09■■□□□ 1.61
COPE-204ENST00000593827 CD209Q9NNX6 404 aa25.09■■□□□ 1.61
COPE-204ENST00000593827 SPEF2Q9C093 1822 aa25.08■■□□□ 1.61
COPE-204ENST00000593827 HIRAP54198 1017 aaPredicted RBP25.08■■□□□ 1.61
COPE-204ENST00000593827 METTL24Q5JXM2 366 aa25.08■■□□□ 1.61
COPE-204ENST00000593827 RBM26Q5T8P6 1007 aaKnown RBP25.08■■□□□ 1.61
COPE-204ENST00000593827 ZKSCAN2Q63HK3 967 aa25.08■■□□□ 1.61
COPE-204ENST00000593827 GMLQ99445 158 aa25.08■■□□□ 1.61
COPE-204ENST00000593827 RIPOR2Q9Y4F9 1068 aa25.08■■□□□ 1.61
COPE-204ENST00000593827 BCAR3O75815 825 aa25.07■■□□□ 1.6
COPE-204ENST00000593827 DACT2Q5SW24 774 aa25.07■■□□□ 1.6
COPE-204ENST00000593827 JMYQ8N9B5 988 aa25.07■■□□□ 1.6
COPE-204ENST00000593827 FBXO3Q9UK99 471 aa25.07■■□□□ 1.6
COPE-204ENST00000593827 HDAC9Q9UKV0 1011 aa25.07■■□□□ 1.6
COPE-204ENST00000593827 SHTN1A0MZ66 631 aa25.06■■□□□ 1.6
COPE-204ENST00000593827 TRIM27P14373 513 aa25.06■■□□□ 1.6
COPE-204ENST00000593827 KLRK1P26718 216 aa25.06■■□□□ 1.6
COPE-204ENST00000593827 IL1R1P14778 569 aa25.05■■□□□ 1.6
COPE-204ENST00000593827 GTF2IP78347 998 aa25.05■■□□□ 1.6
COPE-204ENST00000593827 PUS3Q9BZE2 481 aaKnown RBP25.05■■□□□ 1.6
COPE-204ENST00000593827 MYOZ2Q9NPC6 264 aa25.05■■□□□ 1.6
COPE-204ENST00000593827 ABT1Q9ULW3 272 aaKnown RBP25.05■■□□□ 1.6
COPE-204ENST00000593827 CAVIN4Q5BKX8 364 aa25.04■■□□□ 1.6
COPE-204ENST00000593827 VPS37DQ86XT2 251 aa25.04■■□□□ 1.6
COPE-204ENST00000593827 SNAP23O00161 211 aa25.03■■□□□ 1.6
COPE-204ENST00000593827 PDE8BO95263 885 aa25.03■■□□□ 1.6
COPE-204ENST00000593827 HIBADHP31937 336 aaKnown RBP25.03■■□□□ 1.6
COPE-204ENST00000593827 KRT26Q7Z3Y9 468 aa25.03■■□□□ 1.6
COPE-204ENST00000593827 SULF1Q8IWU6 871 aa25.03■■□□□ 1.6
COPE-204ENST00000593827 GLIS2Q9BZE0 524 aaPredicted RBP25.03■■□□□ 1.6
COPE-204ENST00000593827 LRRFIP2Q9Y608 721 aaKnown RBP25.03■■□□□ 1.6
COPE-204ENST00000593827 IRS2Q9Y4H2 1338 aa25.03■■□□□ 1.6
COPE-204ENST00000593827 CNTNAP1P78357 1384 aa25.03■■□□□ 1.6
COPE-204ENST00000593827 EYA2O00167 538 aa25.02■■□□□ 1.6
COPE-204ENST00000593827 FKBP1AP62942 108 aaKnown RBP25.02■■□□□ 1.6
COPE-204ENST00000593827 LRRC24Q50LG9 513 aa25.02■■□□□ 1.6
COPE-204ENST00000593827 FTSJ3Q8IY81 847 aaKnown RBP25.02■■□□□ 1.6
COPE-204ENST00000593827 MEIS3Q99687 375 aa25.02■■□□□ 1.6
COPE-204ENST00000593827 MKRN1Q9UHC7 482 aaKnown RBP25.02■■□□□ 1.6
COPE-204ENST00000593827 TRAF5O00463 557 aa25.01■■□□□ 1.59
COPE-204ENST00000593827 IFIT1P09914 478 aaKnown RBP25.01■■□□□ 1.59
COPE-204ENST00000593827 DEFB115Q30KQ5 88 aa25.01■■□□□ 1.59
COPE-204ENST00000593827 SCN9AQ15858 1988 aa25.01■■□□□ 1.59
COPE-204ENST00000593827 RASSF10A6NK89 507 aa25■■□□□ 1.59
COPE-204ENST00000593827 CIAO1O76071 339 aa25■■□□□ 1.59
COPE-204ENST00000593827 SASH1O94885 1247 aa25■■□□□ 1.59
COPE-204ENST00000593827 CELF2O95319 508 aaKnown RBP25■■□□□ 1.59
COPE-204ENST00000593827 PTPN12Q05209 780 aaKnown RBP25■■□□□ 1.59
COPE-204ENST00000593827 SCARF1Q14162 830 aa25■■□□□ 1.59
COPE-204ENST00000593827 PUM3Q15397 648 aaKnown RBP25■■□□□ 1.59
COPE-204ENST00000593827 USP48Q86UV5 1035 aa25■■□□□ 1.59
COPE-204ENST00000593827 CLUAP1Q96AJ1 413 aa25■■□□□ 1.59
COPE-204ENST00000593827 GGA3Q9NZ52 723 aa25■■□□□ 1.59
COPE-204ENST00000593827 EGFRP00533 1210 aa24.99■■□□□ 1.59
COPE-204ENST00000593827 GNAI2P04899 355 aa24.99■■□□□ 1.59
COPE-204ENST00000593827 RFX5P48382 616 aaPredicted RBP24.99■■□□□ 1.59
COPE-204ENST00000593827 KLHDC4Q8TBB5 520 aa24.99■■□□□ 1.59
COPE-204ENST00000593827 PITPNM2Q9BZ72 1349 aa24.99■■□□□ 1.59
COPE-204ENST00000593827 ECE1P42892 770 aa24.98■■□□□ 1.59
COPE-204ENST00000593827 CEP126Q9P2H0 1117 aa24.98■■□□□ 1.59
COPE-204ENST00000593827 FRAT2O75474 233 aaPredicted RBP24.97■■□□□ 1.59
COPE-204ENST00000593827 MS4A1P11836 297 aa24.97■■□□□ 1.59
COPE-204ENST00000593827 SLC5A1P13866 664 aa24.97■■□□□ 1.59
COPE-204ENST00000593827 CST9Q5W186 159 aa24.97■■□□□ 1.59
COPE-204ENST00000593827 KIAA0825Q8IV33 1275 aa24.97■■□□□ 1.59
COPE-204ENST00000593827 VGLL2Q8N8G2 317 aa24.97■■□□□ 1.59
COPE-204ENST00000593827 TDRD7Q8NHU6 1098 aaKnown RBP24.97■■□□□ 1.59
COPE-204ENST00000593827 FAM84BQ96KN1 310 aaPredicted RBP24.97■■□□□ 1.59
COPE-204ENST00000593827 MXD3Q9BW11 206 aa24.97■■□□□ 1.59
COPE-204ENST00000593827 ZNF408Q9H9D4 720 aa24.97■■□□□ 1.59
COPE-204ENST00000593827 TLL2Q9Y6L7 1015 aa24.97■■□□□ 1.59
COPE-204ENST00000593827 PSME4Q14997 1843 aa24.96■■□□□ 1.59
COPE-204ENST00000593827 FAM205AQ6ZU69 1335 aa24.96■■□□□ 1.59
COPE-204ENST00000593827 IL15P40933 162 aaPredicted RBP24.96■■□□□ 1.59
COPE-204ENST00000593827 GYG1P46976 350 aa24.96■■□□□ 1.59
COPE-204ENST00000593827 ANGEL2Q5VTE6 544 aaKnown RBP24.96■■□□□ 1.59
COPE-204ENST00000593827 DZIP1LQ8IYY4 767 aaKnown RBP24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms