RNA–Protein interactions for RNA: ENST00000593678.5

GTF2F1-202, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 2

Gene GTF2F1, Length 1,705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-202ENST00000593678 RABEP1Q15276 862 aa17.97■□□□□ 0.47
GTF2F1-202ENST00000593678 MSL1Q68DK7 614 aa17.97■□□□□ 0.47
GTF2F1-202ENST00000593678 ZSCAN25Q6NSZ9 544 aa17.97■□□□□ 0.47
GTF2F1-202ENST00000593678 DEFB132Q7Z7B7 95 aa17.97■□□□□ 0.47
GTF2F1-202ENST00000593678 HSCBQ8IWL3 235 aa17.97■□□□□ 0.47
GTF2F1-202ENST00000593678 ZFYP08048 801 aaPredicted RBP17.96■□□□□ 0.47
GTF2F1-202ENST00000593678 PDE6BP35913 854 aa17.96■□□□□ 0.47
GTF2F1-202ENST00000593678 MCAMP43121 646 aa17.96■□□□□ 0.47
GTF2F1-202ENST00000593678 ANKIB1Q9P2G1 1089 aa17.96■□□□□ 0.47
GTF2F1-202ENST00000593678 A0A0D9SFI3 127 aa17.95■□□□□ 0.46
GTF2F1-202ENST00000593678 ANAPC15P60006 121 aa17.95■□□□□ 0.46
GTF2F1-202ENST00000593678 MCMDC2Q4G0Z9 681 aa17.95■□□□□ 0.46
GTF2F1-202ENST00000593678 IL25Q9H293 177 aa17.95■□□□□ 0.46
GTF2F1-202ENST00000593678 COL4A1P02462 1669 aa17.95■□□□□ 0.46
GTF2F1-202ENST00000593678 QSER1Q2KHR3 1735 aa17.95■□□□□ 0.46
GTF2F1-202ENST00000593678 SNAP23O00161 211 aa17.95■□□□□ 0.46
GTF2F1-202ENST00000593678 RNF113AO15541 343 aaKnown RBP17.95■□□□□ 0.46
GTF2F1-202ENST00000593678 SCARF1Q14162 830 aa17.95■□□□□ 0.46
GTF2F1-202ENST00000593678 SPATA5Q8NB90 893 aa17.95■□□□□ 0.46
GTF2F1-202ENST00000593678 LSG1Q9H089 658 aaKnown RBP17.95■□□□□ 0.46
GTF2F1-202ENST00000593678 ANTXR1Q9H6X2 564 aa17.95■□□□□ 0.46
GTF2F1-202ENST00000593678 HELLSQ9NRZ9 838 aa17.95■□□□□ 0.46
GTF2F1-202ENST00000593678 A0A1B0GUL6 1792 aa17.94■□□□□ 0.46
GTF2F1-202ENST00000593678 BBOX1O75936 387 aa17.94■□□□□ 0.46
GTF2F1-202ENST00000593678 BCAMP50895 628 aa17.94■□□□□ 0.46
GTF2F1-202ENST00000593678 TMC4Q7Z404 712 aa17.94■□□□□ 0.46
GTF2F1-202ENST00000593678 CRAMP1Q96RY5 1269 aa17.94■□□□□ 0.46
GTF2F1-202ENST00000593678 CCDC171Q6TFL3 1326 aa17.94■□□□□ 0.46
GTF2F1-202ENST00000593678 HOXA10P31260 410 aaPredicted RBP17.93■□□□□ 0.46
GTF2F1-202ENST00000593678 PI16Q6UXB8 463 aa17.93■□□□□ 0.46
GTF2F1-202ENST00000593678 TMX4Q9H1E5 349 aaPredicted RBP17.93■□□□□ 0.46
GTF2F1-202ENST00000593678 ZNF804BA4D1E1 1349 aa17.93■□□□□ 0.46
GTF2F1-202ENST00000593678 XDHP47989 1333 aa17.93■□□□□ 0.46
GTF2F1-202ENST00000593678 NRXN2Q9P2S2 1712 aa17.92■□□□□ 0.46
GTF2F1-202ENST00000593678 KLRG2A4D1S0 409 aaPredicted RBP17.92■□□□□ 0.46
GTF2F1-202ENST00000593678 ST18O60284 1047 aa17.92■□□□□ 0.46
GTF2F1-202ENST00000593678 FRAT2O75474 233 aaPredicted RBP17.92■□□□□ 0.46
GTF2F1-202ENST00000593678 HSPA4P34932 840 aa17.92■□□□□ 0.46
GTF2F1-202ENST00000593678 RASGRF1Q13972 1273 aa17.92■□□□□ 0.46
GTF2F1-202ENST00000593678 WASHC4Q2M389 1173 aa17.92■□□□□ 0.46
GTF2F1-202ENST00000593678 KIF2CQ99661 725 aa17.92■□□□□ 0.46
GTF2F1-202ENST00000593678 HMG20BQ9P0W2 317 aa17.92■□□□□ 0.46
GTF2F1-202ENST00000593678 LEMD3Q9Y2U8 911 aa17.92■□□□□ 0.46
GTF2F1-202ENST00000593678 MED23Q9ULK4 1368 aa17.92■□□□□ 0.46
GTF2F1-202ENST00000593678 IDH1O75874 414 aaKnown RBP17.92■□□□□ 0.46
GTF2F1-202ENST00000593678 NPR1P16066 1061 aa17.92■□□□□ 0.46
GTF2F1-202ENST00000593678 ZKSCAN1P17029 563 aaPredicted RBP17.92■□□□□ 0.46
GTF2F1-202ENST00000593678 RNF20Q5VTR2 975 aa17.92■□□□□ 0.46
GTF2F1-202ENST00000593678 CYP2E1P05181 493 aaPredicted RBP17.91■□□□□ 0.46
GTF2F1-202ENST00000593678 ALDH1B1P30837 517 aa17.91■□□□□ 0.46
GTF2F1-202ENST00000593678 GYG1P46976 350 aa17.91■□□□□ 0.46
GTF2F1-202ENST00000593678 SLC4A3P48751 1232 aa17.91■□□□□ 0.46
GTF2F1-202ENST00000593678 ILDR1Q86SU0 546 aaPredicted RBP17.91■□□□□ 0.46
GTF2F1-202ENST00000593678 SNX21Q969T3 373 aa17.91■□□□□ 0.46
GTF2F1-202ENST00000593678 TBC1D2Q9BYX2 928 aa17.91■□□□□ 0.46
GTF2F1-202ENST00000593678 AKAP11Q9UKA4 1901 aa17.91■□□□□ 0.46
GTF2F1-202ENST00000593678 SEMA3EO15041 775 aa17.9■□□□□ 0.46
GTF2F1-202ENST00000593678 MAP3K12Q12852 859 aa17.9■□□□□ 0.46
GTF2F1-202ENST00000593678 ZMYM1Q5SVZ6 1142 aa17.9■□□□□ 0.46
GTF2F1-202ENST00000593678 IL27Q8NEV9 243 aa17.9■□□□□ 0.46
GTF2F1-202ENST00000593678 HIBADHP31937 336 aaKnown RBP17.89■□□□□ 0.46
GTF2F1-202ENST00000593678 SLC9C2Q5TAH2 1124 aa17.89■□□□□ 0.46
GTF2F1-202ENST00000593678 ZNF589Q86UQ0 364 aaPredicted RBP17.89■□□□□ 0.46
GTF2F1-202ENST00000593678 DENND2AQ9ULE3 1009 aa17.89■□□□□ 0.46
GTF2F1-202ENST00000593678 NSFL1CQ9UNZ2 370 aaKnown RBP17.89■□□□□ 0.46
GTF2F1-202ENST00000593678 MYH7P12883 1935 aa17.89■□□□□ 0.45
GTF2F1-202ENST00000593678 PPEF1O14829 653 aaPredicted RBP17.89■□□□□ 0.45
GTF2F1-202ENST00000593678 SRGNP10124 158 aa17.89■□□□□ 0.45
GTF2F1-202ENST00000593678 PTH1RQ03431 593 aa17.89■□□□□ 0.45
GTF2F1-202ENST00000593678 APPBP2Q92624 585 aa17.89■□□□□ 0.45
GTF2F1-202ENST00000593678 MAP4K1Q92918 833 aa17.89■□□□□ 0.45
GTF2F1-202ENST00000593678 MASTLQ96GX5 879 aa17.89■□□□□ 0.45
GTF2F1-202ENST00000593678 RBM8AQ9Y5S9 174 aaKnown RBP17.89■□□□□ 0.45
GTF2F1-202ENST00000593678 ANKRD31Q8N7Z5 1873 aa17.88■□□□□ 0.45
GTF2F1-202ENST00000593678 ATP2B4P23634 1241 aa17.88■□□□□ 0.45
GTF2F1-202ENST00000593678 PRPF40BQ6NWY9 871 aaKnown RBP17.88■□□□□ 0.45
GTF2F1-202ENST00000593678 SLC16A10Q8TF71 515 aa17.88■□□□□ 0.45
GTF2F1-202ENST00000593678 FAM84BQ96KN1 310 aaPredicted RBP17.88■□□□□ 0.45
GTF2F1-202ENST00000593678 PIH1D3Q9NQM4 214 aaKnown RBP17.88■□□□□ 0.45
GTF2F1-202ENST00000593678 LRP2BPQ9P2M1 347 aa17.88■□□□□ 0.45
GTF2F1-202ENST00000593678 H0YIN7 160 aa17.87■□□□□ 0.45
GTF2F1-202ENST00000593678 SEC62Q99442 399 aaKnown RBP17.87■□□□□ 0.45
GTF2F1-202ENST00000593678 GGA1Q9UJY5 639 aa17.87■□□□□ 0.45
GTF2F1-202ENST00000593678 PALD1Q9ULE6 856 aa17.87■□□□□ 0.45
GTF2F1-202ENST00000593678 IQSEC3Q9UPP2 1182 aaPredicted RBP17.87■□□□□ 0.45
GTF2F1-202ENST00000593678 U3KPZ7 1027 aaPredicted RBP17.87■□□□□ 0.45
GTF2F1-202ENST00000593678 MAST3O60307 1309 aa17.87■□□□□ 0.45
GTF2F1-202ENST00000593678 UFL1O94874 794 aa17.86■□□□□ 0.45
GTF2F1-202ENST00000593678 HSP90AA1P07900 732 aaKnown RBP17.86■□□□□ 0.45
GTF2F1-202ENST00000593678 ADD2P35612 726 aa17.86■□□□□ 0.45
GTF2F1-202ENST00000593678 UBE3CQ15386 1083 aa17.86■□□□□ 0.45
GTF2F1-202ENST00000593678 CCDC129Q6ZRS4 1044 aa17.86■□□□□ 0.45
GTF2F1-202ENST00000593678 ZNF804AQ7Z570 1209 aa17.86■□□□□ 0.45
GTF2F1-202ENST00000593678 FBXO33Q7Z6M2 555 aa17.86■□□□□ 0.45
GTF2F1-202ENST00000593678 ZNF622Q969S3 477 aaKnown RBP eCLIP17.86■□□□□ 0.454e-7■■■□□ 18.9
GTF2F1-202ENST00000593678 NEK4P51957 841 aa17.86■□□□□ 0.45
GTF2F1-202ENST00000593678 GPSM2P81274 684 aa17.86■□□□□ 0.45
GTF2F1-202ENST00000593678 C2CD5Q86YS7 1000 aa17.86■□□□□ 0.45
GTF2F1-202ENST00000593678 SP8Q8IXZ3 490 aa17.86■□□□□ 0.45
GTF2F1-202ENST00000593678 ABCF2Q9UG63 623 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms