RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 CCDC27Q2M243 656 aa21■□□□□ 0.95
LIG1-205ENST00000593425 UBE3BQ7Z3V4 1068 aa21■□□□□ 0.95
LIG1-205ENST00000593425 WWC1Q8IX03 1113 aa21■□□□□ 0.95
LIG1-205ENST00000593425 MXD3Q9BW11 206 aa21■□□□□ 0.95
LIG1-205ENST00000593425 SCAF8Q9UPN6 1271 aaKnown RBP21■□□□□ 0.95
LIG1-205ENST00000593425 H7C1W4 665 aa20.99■□□□□ 0.95
LIG1-205ENST00000593425 CCT4P50991 539 aaKnown RBP20.99■□□□□ 0.95
LIG1-205ENST00000593425 RASAL3Q86YV0 1011 aa20.98■□□□□ 0.95
LIG1-205ENST00000593425 SAGE1Q9NXZ1 904 aa20.98■□□□□ 0.95
LIG1-205ENST00000593425 PITPNM2Q9BZ72 1349 aa20.98■□□□□ 0.95
LIG1-205ENST00000593425 A0A1B0GUL6 1792 aa20.97■□□□□ 0.95
LIG1-205ENST00000593425 SLC4A2P04920 1241 aa20.97■□□□□ 0.95
LIG1-205ENST00000593425 RGS19P49795 217 aa20.97■□□□□ 0.95
LIG1-205ENST00000593425 DACT2Q5SW24 774 aa20.97■□□□□ 0.95
LIG1-205ENST00000593425 TXNRD3Q86VQ6 643 aa20.97■□□□□ 0.95
LIG1-205ENST00000593425 RNF186Q9NXI6 227 aa20.97■□□□□ 0.95
LIG1-205ENST00000593425 TRPA1O75762 1119 aa20.96■□□□□ 0.95
LIG1-205ENST00000593425 CASP7P55210 303 aa20.96■□□□□ 0.95
LIG1-205ENST00000593425 NBPF9Q3BBW0 867 aa20.96■□□□□ 0.95
LIG1-205ENST00000593425 FBXW7Q969H0 707 aa20.96■□□□□ 0.95
LIG1-205ENST00000593425 CSRNP1Q96S65 589 aa20.96■□□□□ 0.95
LIG1-205ENST00000593425 KLRK1P26718 216 aa20.95■□□□□ 0.94
LIG1-205ENST00000593425 IGHMBP2P38935 993 aaKnown RBP20.95■□□□□ 0.94
LIG1-205ENST00000593425 MLLT1Q03111 559 aaPredicted RBP20.95■□□□□ 0.94
LIG1-205ENST00000593425 FLIIQ13045 1269 aa20.95■□□□□ 0.94
LIG1-205ENST00000593425 GCKRQ14397 625 aa20.95■□□□□ 0.94
LIG1-205ENST00000593425 MOB2Q70IA6 237 aa20.95■□□□□ 0.94
LIG1-205ENST00000593425 PLA2G12BQ9BX93 195 aa20.95■□□□□ 0.94
LIG1-205ENST00000593425 CACNA1FO60840 1977 aa20.94■□□□□ 0.94
LIG1-205ENST00000593425 ITGA6P23229 1130 aa20.94■□□□□ 0.94
LIG1-205ENST00000593425 FKBP1BP68106 108 aa20.94■□□□□ 0.94
LIG1-205ENST00000593425 PRAMEF18Q5VWM3 479 aa20.94■□□□□ 0.94
LIG1-205ENST00000593425 COA1Q9GZY4 146 aa20.94■□□□□ 0.94
LIG1-205ENST00000593425 IL16Q14005 1332 aa20.94■□□□□ 0.94
LIG1-205ENST00000593425 FANCIQ9NVI1 1328 aa20.94■□□□□ 0.94
LIG1-205ENST00000593425 WNT10BO00744 389 aa20.93■□□□□ 0.94
LIG1-205ENST00000593425 STRIP1Q5VSL9 837 aa20.93■□□□□ 0.94
LIG1-205ENST00000593425 LEMD3Q9Y2U8 911 aa20.93■□□□□ 0.94
LIG1-205ENST00000593425 ZNF804BA4D1E1 1349 aa20.93■□□□□ 0.94
LIG1-205ENST00000593425 MYO3BQ8WXR4 1341 aa20.93■□□□□ 0.94
LIG1-205ENST00000593425 SASH1O94885 1247 aa20.92■□□□□ 0.94
LIG1-205ENST00000593425 FKBP5Q13451 457 aaPredicted RBP20.92■□□□□ 0.94
LIG1-205ENST00000593425 DNAAF4Q8WXU2 420 aa20.92■□□□□ 0.94
LIG1-205ENST00000593425 CSF1RP07333 972 aa20.91■□□□□ 0.94
LIG1-205ENST00000593425 UBE2Q2LH0YL09 131 aa20.9■□□□□ 0.94
LIG1-205ENST00000593425 OGFOD1Q8N543 542 aa20.9■□□□□ 0.94
LIG1-205ENST00000593425 LINS1Q8NG48 757 aa20.9■□□□□ 0.94
LIG1-205ENST00000593425 MPHOSPH8Q99549 860 aa20.9■□□□□ 0.94
LIG1-205ENST00000593425 ANKRD2Q9GZV1 360 aa20.9■□□□□ 0.94
LIG1-205ENST00000593425 MYH16Q9H6N6 1097 aa20.9■□□□□ 0.94
LIG1-205ENST00000593425 CHRNDQ07001 517 aa20.89■□□□□ 0.93
LIG1-205ENST00000593425 NCBP3Q53F19 620 aaKnown RBP20.89■□□□□ 0.93
LIG1-205ENST00000593425 TTLL5Q6EMB2 1281 aa20.89■□□□□ 0.93
LIG1-205ENST00000593425 KIAA0825Q8IV33 1275 aa20.89■□□□□ 0.93
LIG1-205ENST00000593425 VAMP4O75379 141 aa20.88■□□□□ 0.93
LIG1-205ENST00000593425 REM2Q8IYK8 340 aaPredicted RBP20.88■□□□□ 0.93
LIG1-205ENST00000593425 SALL2Q9Y467 1007 aaPredicted RBP20.88■□□□□ 0.93
LIG1-205ENST00000593425 ECM29Q5VYK3 1845 aa20.88■□□□□ 0.93
LIG1-205ENST00000593425 IRS2Q9Y4H2 1338 aa20.87■□□□□ 0.93
LIG1-205ENST00000593425 SNAP23O00161 211 aa20.87■□□□□ 0.93
LIG1-205ENST00000593425 GTF2IP78347 998 aa20.87■□□□□ 0.93
LIG1-205ENST00000593425 EXOSC9Q06265 439 aaKnown RBP20.87■□□□□ 0.93
LIG1-205ENST00000593425 TTLL12Q14166 644 aaPredicted RBP20.87■□□□□ 0.93
LIG1-205ENST00000593425 MRS2Q9HD23 443 aa20.87■□□□□ 0.93
LIG1-205ENST00000593425 ANKRD18BA2A2Z9 1011 aa20.86■□□□□ 0.93
LIG1-205ENST00000593425 F6X3S4 739 aa20.86■□□□□ 0.93
LIG1-205ENST00000593425 TAF5LO75529 589 aa20.86■□□□□ 0.93
LIG1-205ENST00000593425 KCNJ4P48050 445 aa20.86■□□□□ 0.93
LIG1-205ENST00000593425 ZBED3Q96IU2 234 aaPredicted RBP20.86■□□□□ 0.93
LIG1-205ENST00000593425 CD209Q9NNX6 404 aa20.86■□□□□ 0.93
LIG1-205ENST00000593425 FOXO4P98177 505 aa20.85■□□□□ 0.93
LIG1-205ENST00000593425 HDAC9Q9UKV0 1011 aa20.85■□□□□ 0.93
LIG1-205ENST00000593425 NF2P35240 595 aa20.84■□□□□ 0.93
LIG1-205ENST00000593425 MKRN3Q13064 507 aaKnown RBP20.84■□□□□ 0.93
LIG1-205ENST00000593425 APOBEC3FQ8IUX4 373 aaKnown RBP20.84■□□□□ 0.93
LIG1-205ENST00000593425 CERS5Q8N5B7 392 aa20.84■□□□□ 0.93
LIG1-205ENST00000593425 HELBQ8NG08 1087 aaPredicted RBP20.84■□□□□ 0.93
LIG1-205ENST00000593425 MMP14P50281 582 aa20.83■□□□□ 0.93
LIG1-205ENST00000593425 SOX10P56693 466 aa20.83■□□□□ 0.93
LIG1-205ENST00000593425 PRKG1Q13976 671 aa20.83■□□□□ 0.93
LIG1-205ENST00000593425 BEND3Q5T5X7 828 aa20.83■□□□□ 0.93
LIG1-205ENST00000593425 CTU1Q7Z7A3 348 aaKnown RBP20.83■□□□□ 0.93
LIG1-205ENST00000593425 WDR63Q8IWG1 891 aa20.83■□□□□ 0.93
LIG1-205ENST00000593425 SPINK5Q9NQ38 1064 aaPredicted RBP20.83■□□□□ 0.93
LIG1-205ENST00000593425 CHMP3Q9Y3E7 222 aa20.83■□□□□ 0.93
LIG1-205ENST00000593425 TBC1D8O95759 1140 aa20.82■□□□□ 0.92
LIG1-205ENST00000593425 PTPN12Q05209 780 aaKnown RBP20.82■□□□□ 0.92
LIG1-205ENST00000593425 IFIT5Q13325 482 aaKnown RBP20.82■□□□□ 0.92
LIG1-205ENST00000593425 EPHA10Q5JZY3 1008 aa20.82■□□□□ 0.92
LIG1-205ENST00000593425 FZD1Q9UP38 647 aa20.82■□□□□ 0.92
LIG1-205ENST00000593425 PCDHAC2Q9Y5I4 1007 aa20.82■□□□□ 0.92
LIG1-205ENST00000593425 COL1A1P02452 1464 aaPredicted RBP20.81■□□□□ 0.92
LIG1-205ENST00000593425 SSC5DA1L4H1 1573 aa20.81■□□□□ 0.92
LIG1-205ENST00000593425 C15orf52Q6ZUT6 534 aaKnown RBP20.81■□□□□ 0.92
LIG1-205ENST00000593425 TM4SF4P48230 202 aa20.8■□□□□ 0.92
LIG1-205ENST00000593425 LMBR1LQ6UX01 489 aa20.8■□□□□ 0.92
LIG1-205ENST00000593425 ZNF296Q8WUU4 475 aaPredicted RBP20.8■□□□□ 0.92
LIG1-205ENST00000593425 ZNF594Q96JF6 807 aaPredicted RBP20.8■□□□□ 0.92
LIG1-205ENST00000593425 LAMB1P07942 1786 aa20.8■□□□□ 0.92
LIG1-205ENST00000593425 IL1R1P14778 569 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms