RNA–Protein interactions for RNA: ENST00000592839.6

SF3A2-207, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-207ENST00000592839 USP17L1Q7RTZ2 530 aa18.8■□□□□ 0.6
SF3A2-207ENST00000592839 C9orf78Q9NZ63 289 aaPredicted RBP18.8■□□□□ 0.6
SF3A2-207ENST00000592839 EGFRP00533 1210 aa18.79■□□□□ 0.6
SF3A2-207ENST00000592839 NBPF7P0C2Y1 421 aaPredicted RBP18.79■□□□□ 0.6
SF3A2-207ENST00000592839 VEGFBP49765 207 aa18.79■□□□□ 0.6
SF3A2-207ENST00000592839 TLL2Q9Y6L7 1015 aa18.79■□□□□ 0.6
SF3A2-207ENST00000592839 PITPNM2Q9BZ72 1349 aa18.78■□□□□ 0.6
SF3A2-207ENST00000592839 CCDC57Q2TAC2 916 aa18.78■□□□□ 0.6
SF3A2-207ENST00000592839 TXNRD3Q86VQ6 643 aa18.78■□□□□ 0.6
SF3A2-207ENST00000592839 AIDAQ96BJ3 306 aa18.78■□□□□ 0.6
SF3A2-207ENST00000592839 SUCLG2Q96I99 432 aa18.78■□□□□ 0.6
SF3A2-207ENST00000592839 TRAF5O00463 557 aa18.77■□□□□ 0.6
SF3A2-207ENST00000592839 KIF4BQ2VIQ3 1234 aa18.77■□□□□ 0.6
SF3A2-207ENST00000592839 DEFB115Q30KQ5 88 aa18.77■□□□□ 0.6
SF3A2-207ENST00000592839 SLC4A10Q6U841 1118 aa18.77■□□□□ 0.6
SF3A2-207ENST00000592839 SAMD7Q7Z3H4 446 aa18.77■□□□□ 0.6
SF3A2-207ENST00000592839 USP44Q9H0E7 712 aa18.77■□□□□ 0.6
SF3A2-207ENST00000592839 ARAP2Q8WZ64 1704 aa18.77■□□□□ 0.59
SF3A2-207ENST00000592839 FOXN1O15353 648 aa18.76■□□□□ 0.59
SF3A2-207ENST00000592839 USP17L8P0C7I0 530 aa18.76■□□□□ 0.59
SF3A2-207ENST00000592839 SAPCD2Q86UD0 394 aa18.76■□□□□ 0.59
SF3A2-207ENST00000592839 ANKRD44Q8N8A2 993 aa18.76■□□□□ 0.59
SF3A2-207ENST00000592839 GLIS2Q9BZE0 524 aaPredicted RBP18.76■□□□□ 0.59
SF3A2-207ENST00000592839 G3V3G9 751 aa18.75■□□□□ 0.59
SF3A2-207ENST00000592839 IL1R1P14778 569 aa18.75■□□□□ 0.59
SF3A2-207ENST00000592839 KLRK1P26718 216 aa18.75■□□□□ 0.59
SF3A2-207ENST00000592839 CTCFP49711 727 aaPredicted RBP18.75■□□□□ 0.59
SF3A2-207ENST00000592839 FKBP1AP62942 108 aaKnown RBP18.75■□□□□ 0.59
SF3A2-207ENST00000592839 DCAF8Q5TAQ9 597 aa18.75■□□□□ 0.59
SF3A2-207ENST00000592839 ARHGAP45Q92619 1136 aa18.75■□□□□ 0.59
SF3A2-207ENST00000592839 PRDM10Q9NQV6 1147 aa18.75■□□□□ 0.59
SF3A2-207ENST00000592839 ECM29Q5VYK3 1845 aa18.74■□□□□ 0.59
SF3A2-207ENST00000592839 FMR1Q06787 632 aaKnown RBP eCLIP18.74■□□□□ 0.59
SF3A2-207ENST00000592839 TBC1D10BQ4KMP7 808 aaPredicted RBP18.74■□□□□ 0.59
SF3A2-207ENST00000592839 LDHAL6AQ6ZMR3 332 aa18.74■□□□□ 0.59
SF3A2-207ENST00000592839 BICC1Q9H694 974 aaKnown RBP18.74■□□□□ 0.59
SF3A2-207ENST00000592839 CD209Q9NNX6 404 aa18.74■□□□□ 0.59
SF3A2-207ENST00000592839 MYOZ2Q9NPC6 264 aa18.74■□□□□ 0.59
SF3A2-207ENST00000592839 SMC4Q9NTJ3 1288 aa18.74■□□□□ 0.59
SF3A2-207ENST00000592839 ABT1Q9ULW3 272 aaKnown RBP18.74■□□□□ 0.59
SF3A2-207ENST00000592839 RIPOR2Q9Y4F9 1068 aa18.74■□□□□ 0.59
SF3A2-207ENST00000592839 KIF16BQ96L93 1317 aa18.74■□□□□ 0.59
SF3A2-207ENST00000592839 RARSP54136 660 aaKnown RBP18.73■□□□□ 0.59
SF3A2-207ENST00000592839 UBE4AQ14139 1066 aa18.73■□□□□ 0.59
SF3A2-207ENST00000592839 ZBED3Q96IU2 234 aaPredicted RBP18.73■□□□□ 0.59
SF3A2-207ENST00000592839 WBP1LQ9NX94 342 aa18.73■□□□□ 0.59
SF3A2-207ENST00000592839 MROH5Q6ZUA9 1318 aa18.73■□□□□ 0.59
SF3A2-207ENST00000592839 WDR33Q9C0J8 1336 aaKnown RBP18.73■□□□□ 0.59
SF3A2-207ENST00000592839 ZBTB22O15209 634 aa18.72■□□□□ 0.59
SF3A2-207ENST00000592839 CELF2O95319 508 aaKnown RBP18.72■□□□□ 0.59
SF3A2-207ENST00000592839 ECE1P42892 770 aa18.72■□□□□ 0.59
SF3A2-207ENST00000592839 VGLL2Q8N8G2 317 aa18.72■□□□□ 0.59
SF3A2-207ENST00000592839 API5Q9BZZ5 524 aaKnown RBP18.72■□□□□ 0.59
SF3A2-207ENST00000592839 PAPPA2Q9BXP8 1791 aa18.71■□□□□ 0.59
SF3A2-207ENST00000592839 MAP2K1Q02750 393 aaPredicted RBP18.71■□□□□ 0.59
SF3A2-207ENST00000592839 KRT26Q7Z3Y9 468 aa18.71■□□□□ 0.59
SF3A2-207ENST00000592839 MTMR14Q8NCE2 650 aa18.71■□□□□ 0.59
SF3A2-207ENST00000592839 DCPSQ96C86 337 aaKnown RBP18.71■□□□□ 0.59
SF3A2-207ENST00000592839 ZNF594Q96JF6 807 aaPredicted RBP18.71■□□□□ 0.59
SF3A2-207ENST00000592839 GGA3Q9NZ52 723 aa18.71■□□□□ 0.59
SF3A2-207ENST00000592839 FBXO3Q9UK99 471 aa18.71■□□□□ 0.59
SF3A2-207ENST00000592839 FAM205AQ6ZU69 1335 aa18.71■□□□□ 0.59
SF3A2-207ENST00000592839 COL1A1P02452 1464 aaPredicted RBP18.71■□□□□ 0.59
SF3A2-207ENST00000592839 TAF5LO75529 589 aa18.7■□□□□ 0.58
SF3A2-207ENST00000592839 MAP2K2P36507 400 aa18.7■□□□□ 0.58
SF3A2-207ENST00000592839 KCNJ4P48050 445 aa18.7■□□□□ 0.58
SF3A2-207ENST00000592839 DIEXFQ68CQ4 756 aaKnown RBP18.7■□□□□ 0.58
SF3A2-207ENST00000592839 TTLL5Q6EMB2 1281 aa18.7■□□□□ 0.58
SF3A2-207ENST00000592839 ZNF804AQ7Z570 1209 aa18.7■□□□□ 0.58
SF3A2-207ENST00000592839 CNNM1Q9NRU3 951 aa18.7■□□□□ 0.58
SF3A2-207ENST00000592839 CHMP3Q9Y3E7 222 aa18.7■□□□□ 0.58
SF3A2-207ENST00000592839 RFX5P48382 616 aaPredicted RBP18.69■□□□□ 0.58
SF3A2-207ENST00000592839 OGFOD1Q8N543 542 aa18.69■□□□□ 0.58
SF3A2-207ENST00000592839 CAPNS2Q96L46 248 aa18.69■□□□□ 0.58
SF3A2-207ENST00000592839 SNAP23O00161 211 aa18.68■□□□□ 0.58
SF3A2-207ENST00000592839 WNT10BO00744 389 aa18.68■□□□□ 0.58
SF3A2-207ENST00000592839 SASH1O94885 1247 aa18.68■□□□□ 0.58
SF3A2-207ENST00000592839 LBX1P52954 281 aa18.68■□□□□ 0.58
SF3A2-207ENST00000592839 FKBP1BP68106 108 aa18.68■□□□□ 0.58
SF3A2-207ENST00000592839 SCARF1Q14162 830 aa18.68■□□□□ 0.58
SF3A2-207ENST00000592839 TAF7LQ5H9L4 462 aa18.68■□□□□ 0.58
SF3A2-207ENST00000592839 INTS3Q68E01 1043 aaKnown RBP18.68■□□□□ 0.58
SF3A2-207ENST00000592839 USP48Q86UV5 1035 aa18.68■□□□□ 0.58
SF3A2-207ENST00000592839 SULF1Q8IWU6 871 aa18.68■□□□□ 0.58
SF3A2-207ENST00000592839 MIER1Q8N108 512 aa18.68■□□□□ 0.58
SF3A2-207ENST00000592839 TDRD7Q8NHU6 1098 aaKnown RBP18.68■□□□□ 0.58
SF3A2-207ENST00000592839 NOB1Q9ULX3 412 aaKnown RBP18.68■□□□□ 0.58
SF3A2-207ENST00000592839 CERS5Q8N5B7 392 aa18.67■□□□□ 0.58
SF3A2-207ENST00000592839 HELBQ8NG08 1087 aaPredicted RBP18.67■□□□□ 0.58
SF3A2-207ENST00000592839 PUS3Q9BZE2 481 aaKnown RBP18.67■□□□□ 0.58
SF3A2-207ENST00000592839 ASTN2O75129 1339 aaPredicted RBP18.67■□□□□ 0.58
SF3A2-207ENST00000592839 LAMB1P07942 1786 aa18.66■□□□□ 0.58
SF3A2-207ENST00000592839 ADM5C9JUS6 153 aa18.66■□□□□ 0.58
SF3A2-207ENST00000592839 PDE8BO95263 885 aa18.66■□□□□ 0.58
SF3A2-207ENST00000592839 GTF2IP78347 998 aa18.66■□□□□ 0.58
SF3A2-207ENST00000592839 ANGEL2Q5VTE6 544 aaKnown RBP18.66■□□□□ 0.58
SF3A2-207ENST00000592839 PAXIP1Q6ZW49 1069 aaPredicted RBP18.66■□□□□ 0.58
SF3A2-207ENST00000592839 HDAC5Q9UQL6 1122 aa18.66■□□□□ 0.58
SF3A2-207ENST00000592839 FGFR2P21802 821 aa18.65■□□□□ 0.58
SF3A2-207ENST00000592839 PTPN12Q05209 780 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms