RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 HELLSQ9NRZ9 838 aa16.97■□□□□ 0.31
RANBP3-229ENST00000592771 CYP46A1Q9Y6A2 500 aa16.97■□□□□ 0.31
RANBP3-229ENST00000592771 CCDC158Q5M9N0 1113 aa16.96■□□□□ 0.31
RANBP3-229ENST00000592771 ZMYM1Q5SVZ6 1142 aa16.96■□□□□ 0.31
RANBP3-229ENST00000592771 FOXD4L5Q5VV16 416 aaPredicted RBP16.96■□□□□ 0.31
RANBP3-229ENST00000592771 LDHAL6AQ6ZMR3 332 aa16.96■□□□□ 0.31
RANBP3-229ENST00000592771 NOL8Q76FK4 1167 aaKnown RBP16.96■□□□□ 0.31
RANBP3-229ENST00000592771 USP48Q86UV5 1035 aa16.96■□□□□ 0.31
RANBP3-229ENST00000592771 FOXD4L4Q8WXT5 416 aaPredicted RBP16.96■□□□□ 0.31
RANBP3-229ENST00000592771 UTP14AQ9BVJ6 771 aaKnown RBP16.96■□□□□ 0.31
RANBP3-229ENST00000592771 AKAP11Q9UKA4 1901 aa16.96■□□□□ 0.31
RANBP3-229ENST00000592771 BTAF1O14981 1849 aa16.96■□□□□ 0.31
RANBP3-229ENST00000592771 ARAP2Q8WZ64 1704 aa16.96■□□□□ 0.31
RANBP3-229ENST00000592771 RTL9Q8NET4 1388 aa16.96■□□□□ 0.31
RANBP3-229ENST00000592771 RGL2O15211 777 aa16.96■□□□□ 0.3
RANBP3-229ENST00000592771 CHGBP05060 677 aa16.96■□□□□ 0.3
RANBP3-229ENST00000592771 PRKCSHP14314 528 aaPredicted RBP16.96■□□□□ 0.3
RANBP3-229ENST00000592771 CPA1P15085 419 aa16.96■□□□□ 0.3
RANBP3-229ENST00000592771 PSMA5P28066 241 aa16.96■□□□□ 0.3
RANBP3-229ENST00000592771 ATP2B3Q16720 1220 aa16.96■□□□□ 0.3
RANBP3-229ENST00000592771 GLIPR1L2Q4G1C9 344 aa16.96■□□□□ 0.3
RANBP3-229ENST00000592771 CCDC183Q5T5S1 534 aa16.96■□□□□ 0.3
RANBP3-229ENST00000592771 PDRG1Q9NUG6 133 aa16.96■□□□□ 0.3
RANBP3-229ENST00000592771 CNTNAP4Q9C0A0 1308 aa16.95■□□□□ 0.3
RANBP3-229ENST00000592771 STX6O43752 255 aa16.95■□□□□ 0.3
RANBP3-229ENST00000592771 UBE2HP62256 183 aa16.95■□□□□ 0.3
RANBP3-229ENST00000592771 HSP90AA2PQ14568 343 aaPredicted RBP16.95■□□□□ 0.3
RANBP3-229ENST00000592771 METTL24Q5JXM2 366 aa16.95■□□□□ 0.3
RANBP3-229ENST00000592771 ZNF772Q68DY9 489 aaPredicted RBP16.95■□□□□ 0.3
RANBP3-229ENST00000592771 LINC00116Q8NCU8 138 aa16.95■□□□□ 0.3
RANBP3-229ENST00000592771 ZNF512BQ96KM6 892 aaPredicted RBP16.95■□□□□ 0.3
RANBP3-229ENST00000592771 ALDH8A1Q9H2A2 487 aaPredicted RBP16.95■□□□□ 0.3
RANBP3-229ENST00000592771 SMC3Q9UQE7 1217 aa16.95■□□□□ 0.3
RANBP3-229ENST00000592771 U3KPZ7 1027 aaPredicted RBP16.95■□□□□ 0.3
RANBP3-229ENST00000592771 NTSR2O95665 410 aa16.94■□□□□ 0.3
RANBP3-229ENST00000592771 TTC39AQ5SRH9 613 aa16.94■□□□□ 0.3
RANBP3-229ENST00000592771 SEC62Q99442 399 aaKnown RBP16.94■□□□□ 0.3
RANBP3-229ENST00000592771 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.94■□□□□ 0.3
RANBP3-229ENST00000592771 MYH7P12883 1935 aa16.94■□□□□ 0.3
RANBP3-229ENST00000592771 CLEC4GQ6UXB4 293 aa16.94■□□□□ 0.3
RANBP3-229ENST00000592771 CHAMP1Q96JM3 812 aa16.94■□□□□ 0.3
RANBP3-229ENST00000592771 CNNM1Q9NRU3 951 aa16.94■□□□□ 0.3
RANBP3-229ENST00000592771 TAF6LQ9Y6J9 622 aa16.94■□□□□ 0.3
RANBP3-229ENST00000592771 SCN7AQ01118 1682 aa16.94■□□□□ 0.3
RANBP3-229ENST00000592771 RNF113AO15541 343 aaKnown RBP16.93■□□□□ 0.3
RANBP3-229ENST00000592771 KRT32Q14532 448 aa16.93■□□□□ 0.3
RANBP3-229ENST00000592771 GORABQ5T7V8 394 aa16.93■□□□□ 0.3
RANBP3-229ENST00000592771 CCDC129Q6ZRS4 1044 aa16.93■□□□□ 0.3
RANBP3-229ENST00000592771 ATRNO75882 1429 aa16.93■□□□□ 0.3
RANBP3-229ENST00000592771 PDE8BO95263 885 aa16.92■□□□□ 0.3
RANBP3-229ENST00000592771 F13A1P00488 732 aa16.92■□□□□ 0.3
RANBP3-229ENST00000592771 HSP90B1P14625 803 aaKnown RBP16.92■□□□□ 0.3
RANBP3-229ENST00000592771 SYT1P21579 422 aa16.92■□□□□ 0.3
RANBP3-229ENST00000592771 DSCC1Q9BVC3 393 aa16.92■□□□□ 0.3
RANBP3-229ENST00000592771 NIP7Q9Y221 180 aaKnown RBP eCLIP16.92■□□□□ 0.3
RANBP3-229ENST00000592771 ZNF652Q9Y2D9 606 aa16.92■□□□□ 0.3
RANBP3-229ENST00000592771 HCLS1P14317 486 aaPredicted RBP16.92■□□□□ 0.3
RANBP3-229ENST00000592771 RPS6KB1P23443 525 aa16.92■□□□□ 0.3
RANBP3-229ENST00000592771 SCARF1Q14162 830 aa16.92■□□□□ 0.3
RANBP3-229ENST00000592771 RC3H1Q5TC82 1133 aaKnown RBP16.92■□□□□ 0.3
RANBP3-229ENST00000592771 MROH5Q6ZUA9 1318 aa16.92■□□□□ 0.3
RANBP3-229ENST00000592771 LARGE1O95461 756 aa16.91■□□□□ 0.3
RANBP3-229ENST00000592771 FGFR2P21802 821 aa16.91■□□□□ 0.3
RANBP3-229ENST00000592771 COL9A3Q14050 684 aaPredicted RBP16.91■□□□□ 0.3
RANBP3-229ENST00000592771 LRRFIP1Q32MZ4 808 aaKnown RBP16.91■□□□□ 0.3
RANBP3-229ENST00000592771 BLOC1S2Q6QNY1 142 aa16.91■□□□□ 0.3
RANBP3-229ENST00000592771 PTF1AQ7RTS3 328 aa16.91■□□□□ 0.3
RANBP3-229ENST00000592771 MAST3O60307 1309 aa16.91■□□□□ 0.3
RANBP3-229ENST00000592771 GADD45BO75293 160 aaPredicted RBP16.9■□□□□ 0.3
RANBP3-229ENST00000592771 ZFYP08048 801 aaPredicted RBP16.9■□□□□ 0.3
RANBP3-229ENST00000592771 LY75O60449 1722 aa16.9■□□□□ 0.3
RANBP3-229ENST00000592771 SBF2Q86WG5 1849 aa16.9■□□□□ 0.3
RANBP3-229ENST00000592771 FKBP4Q02790 459 aaKnown RBP eCLIP16.9■□□□□ 0.37e-6■□□□□ 9.9
RANBP3-229ENST00000592771 ANKRD1Q15327 319 aa16.9■□□□□ 0.3
RANBP3-229ENST00000592771 SLFNL1Q499Z3 407 aa16.9■□□□□ 0.3
RANBP3-229ENST00000592771 CYP21A2P08686 494 aa16.89■□□□□ 0.29
RANBP3-229ENST00000592771 ZAP70P43403 619 aa16.89■□□□□ 0.29
RANBP3-229ENST00000592771 TCHHQ07283 1943 aa16.89■□□□□ 0.29
RANBP3-229ENST00000592771 ST3GAL1Q11201 340 aa16.89■□□□□ 0.29
RANBP3-229ENST00000592771 PUM3Q15397 648 aaKnown RBP16.89■□□□□ 0.29
RANBP3-229ENST00000592771 CCDC152Q4G0S7 254 aa16.89■□□□□ 0.29
RANBP3-229ENST00000592771 LAMA4Q16363 1823 aa16.89■□□□□ 0.29
RANBP3-229ENST00000592771 ARID4AP29374 1257 aaPredicted RBP16.88■□□□□ 0.29
RANBP3-229ENST00000592771 MCAMP43121 646 aa16.88■□□□□ 0.29
RANBP3-229ENST00000592771 LPIN2Q92539 896 aa16.88■□□□□ 0.29
RANBP3-229ENST00000592771 LARP6Q9BRS8 491 aaKnown RBP16.88■□□□□ 0.29
RANBP3-229ENST00000592771 TAF1LQ8IZX4 1826 aa16.88■□□□□ 0.29
RANBP3-229ENST00000592771 HSPD1P10809 573 aaKnown RBP16.88■□□□□ 0.29
RANBP3-229ENST00000592771 TOB2Q14106 344 aaPredicted RBP16.88■□□□□ 0.29
RANBP3-229ENST00000592771 ME3Q16798 604 aa16.88■□□□□ 0.29
RANBP3-229ENST00000592771 SEPT12Q8IYM1 358 aa16.88■□□□□ 0.29
RANBP3-229ENST00000592771 RNF214Q8ND24 703 aa16.88■□□□□ 0.29
RANBP3-229ENST00000592771 OSBP2Q969R2 916 aa16.88■□□□□ 0.29
RANBP3-229ENST00000592771 PDCL3Q9H2J4 239 aa16.88■□□□□ 0.29
RANBP3-229ENST00000592771 TPCN1Q9ULQ1 816 aa16.88■□□□□ 0.29
RANBP3-229ENST00000592771 CNPY2Q9Y2B0 182 aa16.88■□□□□ 0.29
RANBP3-229ENST00000592771 CASZ1Q86V15 1759 aa16.88■□□□□ 0.29
RANBP3-229ENST00000592771 COL24A1Q17RW2 1714 aa16.87■□□□□ 0.29
RANBP3-229ENST00000592771 FAM177BA6PVY3 158 aa16.87■□□□□ 0.29
RANBP3-229ENST00000592771 M0R2C6 588 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms