RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 MAP3K10Q02779 954 aa9.72□□□□□ -0.85
VMP1-215ENST00000592619 DTHD1Q6ZMT9 781 aa9.72□□□□□ -0.85
VMP1-215ENST00000592619 SPACA7Q96KW9 195 aa9.72□□□□□ -0.85
VMP1-215ENST00000592619 BHLHE41Q9C0J9 482 aaPredicted RBP9.72□□□□□ -0.85
VMP1-215ENST00000592619 NFKBIEO00221 500 aa9.71□□□□□ -0.86
VMP1-215ENST00000592619 ITPKAP23677 461 aa9.71□□□□□ -0.86
VMP1-215ENST00000592619 ARID5AQ03989 594 aa9.71□□□□□ -0.86
VMP1-215ENST00000592619 PCSK7Q16549 785 aa9.71□□□□□ -0.86
VMP1-215ENST00000592619 FOXR1Q6PIV2 292 aa9.71□□□□□ -0.86
VMP1-215ENST00000592619 SV2BQ7L1I2 683 aa9.71□□□□□ -0.86
VMP1-215ENST00000592619 VPS37DQ86XT2 251 aa9.71□□□□□ -0.86
VMP1-215ENST00000592619 TMEM102Q8N9M5 508 aaPredicted RBP9.71□□□□□ -0.86
VMP1-215ENST00000592619 TRERF1Q96PN7 1200 aa9.71□□□□□ -0.86
VMP1-215ENST00000592619 COPRSQ9NQ92 184 aa9.71□□□□□ -0.86
VMP1-215ENST00000592619 GMPR2Q9P2T1 348 aaKnown RBP9.71□□□□□ -0.86
VMP1-215ENST00000592619 AKAP2Q9Y2D5 859 aa9.71□□□□□ -0.86
VMP1-215ENST00000592619 LOC102724428A0A0B4J2F2 783 aa9.7□□□□□ -0.86
VMP1-215ENST00000592619 C11orf95C9JLR9 678 aaPredicted RBP9.7□□□□□ -0.86
VMP1-215ENST00000592619 ACPPP15309 386 aa9.7□□□□□ -0.86
VMP1-215ENST00000592619 ATP2B1P20020 1258 aa9.7□□□□□ -0.86
VMP1-215ENST00000592619 SIK1P57059 783 aa9.7□□□□□ -0.86
VMP1-215ENST00000592619 CCDC85BQ15834 202 aaPredicted RBP9.7□□□□□ -0.86
VMP1-215ENST00000592619 RAB44Q7Z6P3 723 aaPredicted RBP9.7□□□□□ -0.86
VMP1-215ENST00000592619 NXPE3Q969Y0 559 aa9.7□□□□□ -0.86
VMP1-215ENST00000592619 KBTBD4Q9NVX7 518 aa9.7□□□□□ -0.86
VMP1-215ENST00000592619 GRIA4P48058 902 aa9.69□□□□□ -0.86
VMP1-215ENST00000592619 CTBSQ01459 385 aa9.69□□□□□ -0.86
VMP1-215ENST00000592619 RELL1Q8IUW5 271 aa9.69□□□□□ -0.86
VMP1-215ENST00000592619 NSUN5Q96P11 429 aaKnown RBP9.69□□□□□ -0.86
VMP1-215ENST00000592619 CEP44Q9C0F1 390 aa9.69□□□□□ -0.86
VMP1-215ENST00000592619 ZBTB42B2RXF5 422 aa9.68□□□□□ -0.86
VMP1-215ENST00000592619 DNAJA1P31689 397 aaKnown RBP9.68□□□□□ -0.86
VMP1-215ENST00000592619 RPS26P11Q5JNZ5 115 aaPredicted RBP9.68□□□□□ -0.86
VMP1-215ENST00000592619 PBX4Q9BYU1 374 aa9.68□□□□□ -0.86
VMP1-215ENST00000592619 SIN3BO75182 1162 aa9.67□□□□□ -0.86
VMP1-215ENST00000592619 PAK2Q13177 524 aa9.67□□□□□ -0.86
VMP1-215ENST00000592619 LCE2CQ5TA81 110 aa9.67□□□□□ -0.86
VMP1-215ENST00000592619 ZNF468Q5VIY5 522 aaPredicted RBP9.67□□□□□ -0.86
VMP1-215ENST00000592619 RASGRP4Q8TDF6 673 aa9.67□□□□□ -0.86
VMP1-215ENST00000592619 NANOS1Q8WY41 292 aaKnown RBP9.67□□□□□ -0.86
VMP1-215ENST00000592619 TMEM74Q96NL1 305 aa9.67□□□□□ -0.86
VMP1-215ENST00000592619 AVENQ9NQS1 362 aaPredicted RBP9.67□□□□□ -0.86
VMP1-215ENST00000592619 PRR12Q9ULL5 1215 aa9.67□□□□□ -0.86
VMP1-215ENST00000592619 A0A096LPE4 126 aa9.66□□□□□ -0.86
VMP1-215ENST00000592619 A0A1W2PPZ6 126 aa9.66□□□□□ -0.86
VMP1-215ENST00000592619 PDE2AO00408 941 aaPredicted RBP9.66□□□□□ -0.86
VMP1-215ENST00000592619 PPFIA3O75145 1194 aa9.66□□□□□ -0.86
VMP1-215ENST00000592619 TRPA1O75762 1119 aa9.66□□□□□ -0.86
VMP1-215ENST00000592619 GPRASP2Q96D09 838 aa9.66□□□□□ -0.86
VMP1-215ENST00000592619 SPATA32Q96LK8 384 aa9.66□□□□□ -0.86
VMP1-215ENST00000592619 KCNQ5Q9NR82 932 aa9.66□□□□□ -0.86
VMP1-215ENST00000592619 SNRPBP14678 240 aaKnown RBP9.65□□□□□ -0.86
VMP1-215ENST00000592619 ATF4P18848 351 aaPredicted RBP9.65□□□□□ -0.86
VMP1-215ENST00000592619 SPRED3Q2MJR0 410 aa9.65□□□□□ -0.86
VMP1-215ENST00000592619 SV2AQ7L0J3 742 aa9.65□□□□□ -0.86
VMP1-215ENST00000592619 SYT9Q86SS6 491 aa9.65□□□□□ -0.86
VMP1-215ENST00000592619 NECAB3Q96P71 396 aaPredicted RBP9.65□□□□□ -0.86
VMP1-215ENST00000592619 HHIPQ96QV1 700 aa9.65□□□□□ -0.86
VMP1-215ENST00000592619 SPON2Q9BUD6 331 aa9.65□□□□□ -0.86
VMP1-215ENST00000592619 DNAJB12Q9NXW2 375 aaKnown RBP9.65□□□□□ -0.86
VMP1-215ENST00000592619 ADAMTS1Q9UHI8 967 aa9.65□□□□□ -0.86
VMP1-215ENST00000592619 J3QW42 95 aa9.64□□□□□ -0.87
VMP1-215ENST00000592619 GBP2P32456 591 aaPredicted RBP9.64□□□□□ -0.87
VMP1-215ENST00000592619 EIF4A3P38919 411 aaKnown RBP9.64□□□□□ -0.87
VMP1-215ENST00000592619 RBL2Q08999 1139 aa9.64□□□□□ -0.87
VMP1-215ENST00000592619 TPTE2Q6XPS3 522 aa9.64□□□□□ -0.87
VMP1-215ENST00000592619 KIAA0825Q8IV33 1275 aa9.64□□□□□ -0.87
VMP1-215ENST00000592619 VWA5B2Q8N398 1253 aa9.64□□□□□ -0.87
VMP1-215ENST00000592619 TNFRSF25Q93038 417 aa9.64□□□□□ -0.87
VMP1-215ENST00000592619 TRIM56Q9BRZ2 755 aaKnown RBP9.64□□□□□ -0.87
VMP1-215ENST00000592619 RBSNQ9H1K0 784 aa9.64□□□□□ -0.87
VMP1-215ENST00000592619 RASSF4Q9H2L5 321 aa9.64□□□□□ -0.87
VMP1-215ENST00000592619 ZNF576Q9H609 170 aa9.64□□□□□ -0.87
VMP1-215ENST00000592619 SEC31BQ9NQW1 1179 aa9.64□□□□□ -0.87
VMP1-215ENST00000592619 METTL12A8MUP2 240 aa9.63□□□□□ -0.87
VMP1-215ENST00000592619 GPR25O00155 361 aa9.63□□□□□ -0.87
VMP1-215ENST00000592619 C2CD2LO14523 706 aa9.63□□□□□ -0.87
VMP1-215ENST00000592619 FBXO24O75426 580 aa9.63□□□□□ -0.87
VMP1-215ENST00000592619 GHRHP01286 108 aa9.63□□□□□ -0.87
VMP1-215ENST00000592619 FGRP09769 529 aa9.63□□□□□ -0.87
VMP1-215ENST00000592619 MLLT1Q03111 559 aaPredicted RBP9.63□□□□□ -0.87
VMP1-215ENST00000592619 SEC16BQ96JE7 1060 aa9.63□□□□□ -0.87
VMP1-215ENST00000592619 RHOVQ96L33 236 aa9.63□□□□□ -0.87
VMP1-215ENST00000592619 CDC14CA4D256 554 aa9.62□□□□□ -0.87
VMP1-215ENST00000592619 MINDY4BA8MYZ0 360 aa9.62□□□□□ -0.87
VMP1-215ENST00000592619 ENC1O14682 589 aa9.62□□□□□ -0.87
VMP1-215ENST00000592619 GTF2F1P35269 517 aaKnown RBP eCLIP9.62□□□□□ -0.87
VMP1-215ENST00000592619 LIG3P49916 1009 aa9.62□□□□□ -0.87
VMP1-215ENST00000592619 ATP11AP98196 1134 aa9.62□□□□□ -0.87
VMP1-215ENST00000592619 HFE2Q6ZVN8 426 aa9.62□□□□□ -0.87
VMP1-215ENST00000592619 MCF2L2Q86YR7 1114 aa9.62□□□□□ -0.87
VMP1-215ENST00000592619 PHC3Q8NDX5 983 aa9.62□□□□□ -0.87
VMP1-215ENST00000592619 DHX38Q92620 1227 aaKnown RBP9.62□□□□□ -0.87
VMP1-215ENST00000592619 POP1Q99575 1024 aaKnown RBP9.62□□□□□ -0.87
VMP1-215ENST00000592619 UBE2OQ9C0C9 1292 aaKnown RBP9.62□□□□□ -0.87
VMP1-215ENST00000592619 SMNDC1O75940 238 aaKnown RBP eCLIP9.61□□□□□ -0.87
VMP1-215ENST00000592619 CELA3AP09093 270 aa9.61□□□□□ -0.87
VMP1-215ENST00000592619 BMP4P12644 408 aa9.61□□□□□ -0.87
VMP1-215ENST00000592619 RPS26P62854 115 aaKnown RBP9.61□□□□□ -0.87
VMP1-215ENST00000592619 DPH6Q7L8W6 267 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms