RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 RASSF10A6NK89 507 aa17.52■□□□□ 0.4
APOC1-208ENST00000592535 SNAP23O00161 211 aa17.52■□□□□ 0.4
APOC1-208ENST00000592535 TAF5LO75529 589 aa17.52■□□□□ 0.4
APOC1-208ENST00000592535 KCNJ4P48050 445 aa17.52■□□□□ 0.4
APOC1-208ENST00000592535 KIF4BQ2VIQ3 1234 aa17.52■□□□□ 0.4
APOC1-208ENST00000592535 TAF7LQ5H9L4 462 aa17.52■□□□□ 0.4
APOC1-208ENST00000592535 CST9Q5W186 159 aa17.52■□□□□ 0.4
APOC1-208ENST00000592535 COA1Q9GZY4 146 aa17.52■□□□□ 0.4
APOC1-208ENST00000592535 CT47B1P0C2W7 299 aaPredicted RBP17.51■□□□□ 0.39
APOC1-208ENST00000592535 VEGFBP49765 207 aa17.51■□□□□ 0.39
APOC1-208ENST00000592535 DEFB115Q30KQ5 88 aa17.51■□□□□ 0.39
APOC1-208ENST00000592535 CDC37L1Q7L3B6 337 aa17.51■□□□□ 0.39
APOC1-208ENST00000592535 GMLQ99445 158 aa17.51■□□□□ 0.39
APOC1-208ENST00000592535 IRS2Q9Y4H2 1338 aa17.5■□□□□ 0.39
APOC1-208ENST00000592535 HSPA1AP0DMV8 641 aaKnown RBP17.5■□□□□ 0.39
APOC1-208ENST00000592535 HSPA1BP0DMV9 641 aaKnown RBP17.5■□□□□ 0.39
APOC1-208ENST00000592535 ZNF280AP59817 542 aaPredicted RBP17.5■□□□□ 0.39
APOC1-208ENST00000592535 DACT2Q5SW24 774 aa17.5■□□□□ 0.39
APOC1-208ENST00000592535 LDHAL6AQ6ZMR3 332 aa17.5■□□□□ 0.39
APOC1-208ENST00000592535 USP48Q86UV5 1035 aa17.5■□□□□ 0.39
APOC1-208ENST00000592535 FBXW7Q969H0 707 aa17.5■□□□□ 0.39
APOC1-208ENST00000592535 MXD3Q9BW11 206 aa17.5■□□□□ 0.39
APOC1-208ENST00000592535 BICC1Q9H694 974 aaKnown RBP17.5■□□□□ 0.39
APOC1-208ENST00000592535 CNNM1Q9NRU3 951 aa17.5■□□□□ 0.39
APOC1-208ENST00000592535 ASTN2O75129 1339 aaPredicted RBP17.49■□□□□ 0.39
APOC1-208ENST00000592535 CELF2O95319 508 aaKnown RBP17.49■□□□□ 0.39
APOC1-208ENST00000592535 RABL6Q3YEC7 729 aaPredicted RBP17.49■□□□□ 0.39
APOC1-208ENST00000592535 DLK2Q6UY11 383 aa17.49■□□□□ 0.39
APOC1-208ENST00000592535 ANKRD44Q8N8A2 993 aa17.49■□□□□ 0.39
APOC1-208ENST00000592535 USP44Q9H0E7 712 aa17.49■□□□□ 0.39
APOC1-208ENST00000592535 NOB1Q9ULX3 412 aaKnown RBP17.49■□□□□ 0.39
APOC1-208ENST00000592535 PLIN1O60240 522 aa17.48■□□□□ 0.39
APOC1-208ENST00000592535 USP17L8P0C7I0 530 aa17.48■□□□□ 0.39
APOC1-208ENST00000592535 STRIP1Q5VSL9 837 aa17.48■□□□□ 0.39
APOC1-208ENST00000592535 C15orf52Q6ZUT6 534 aaKnown RBP17.48■□□□□ 0.39
APOC1-208ENST00000592535 PUS3Q9BZE2 481 aaKnown RBP17.48■□□□□ 0.39
APOC1-208ENST00000592535 ZNF408Q9H9D4 720 aa17.48■□□□□ 0.39
APOC1-208ENST00000592535 TLL2Q9Y6L7 1015 aa17.48■□□□□ 0.39
APOC1-208ENST00000592535 ADM5C9JUS6 153 aa17.47■□□□□ 0.39
APOC1-208ENST00000592535 RARSP54136 660 aaKnown RBP17.47■□□□□ 0.39
APOC1-208ENST00000592535 KRT26Q7Z3Y9 468 aa17.47■□□□□ 0.39
APOC1-208ENST00000592535 DCPSQ96C86 337 aaKnown RBP17.47■□□□□ 0.39
APOC1-208ENST00000592535 CD209Q9NNX6 404 aa17.47■□□□□ 0.39
APOC1-208ENST00000592535 MYOZ2Q9NPC6 264 aa17.47■□□□□ 0.39
APOC1-208ENST00000592535 GGA3Q9NZ52 723 aa17.47■□□□□ 0.39
APOC1-208ENST00000592535 WDR33Q9C0J8 1336 aaKnown RBP17.47■□□□□ 0.39
APOC1-208ENST00000592535 BRPF1P55201 1214 aaPredicted RBP17.46■□□□□ 0.39
APOC1-208ENST00000592535 GTF2IP78347 998 aa17.46■□□□□ 0.39
APOC1-208ENST00000592535 SCARF1Q14162 830 aa17.46■□□□□ 0.39
APOC1-208ENST00000592535 TTLL5Q6EMB2 1281 aa17.46■□□□□ 0.39
APOC1-208ENST00000592535 PAXIP1Q6ZW49 1069 aaPredicted RBP17.46■□□□□ 0.39
APOC1-208ENST00000592535 THSD7BQ9C0I4 1608 aa17.46■□□□□ 0.39
APOC1-208ENST00000592535 MYO3BQ8WXR4 1341 aa17.46■□□□□ 0.38
APOC1-208ENST00000592535 CYP4F22Q6NT55 531 aa17.45■□□□□ 0.38
APOC1-208ENST00000592535 API5Q9BZZ5 524 aaKnown RBP17.45■□□□□ 0.38
APOC1-208ENST00000592535 HNRNPUQ00839 825 aaKnown RBP eCLIP17.44■□□□□ 0.38
APOC1-208ENST00000592535 ANGEL2Q5VTE6 544 aaKnown RBP17.44■□□□□ 0.38
APOC1-208ENST00000592535 ZNF804AQ7Z570 1209 aa17.44■□□□□ 0.38
APOC1-208ENST00000592535 SAPCD2Q86UD0 394 aa17.44■□□□□ 0.38
APOC1-208ENST00000592535 CAPNS2Q96L46 248 aa17.44■□□□□ 0.38
APOC1-208ENST00000592535 RIPOR2Q9Y4F9 1068 aa17.44■□□□□ 0.38
APOC1-208ENST00000592535 GRM1Q13255 1194 aa17.43■□□□□ 0.38
APOC1-208ENST00000592535 LRRC24Q50LG9 513 aa17.43■□□□□ 0.38
APOC1-208ENST00000592535 SULF1Q8IWU6 871 aa17.43■□□□□ 0.38
APOC1-208ENST00000592535 KLHDC4Q8TBB5 520 aa17.43■□□□□ 0.38
APOC1-208ENST00000592535 MROH5Q6ZUA9 1318 aa17.43■□□□□ 0.38
APOC1-208ENST00000592535 IL1R1P14778 569 aa17.42■□□□□ 0.38
APOC1-208ENST00000592535 ECE1P42892 770 aa17.42■□□□□ 0.38
APOC1-208ENST00000592535 UBE4AQ14139 1066 aa17.42■□□□□ 0.38
APOC1-208ENST00000592535 NBPF9Q3BBW0 867 aa17.42■□□□□ 0.38
APOC1-208ENST00000592535 COL13A1Q5TAT6 717 aaPredicted RBP17.42■□□□□ 0.38
APOC1-208ENST00000592535 KIAA0825Q8IV33 1275 aa17.42■□□□□ 0.38
APOC1-208ENST00000592535 OGFOD1Q8N543 542 aa17.42■□□□□ 0.38
APOC1-208ENST00000592535 CERS5Q8N5B7 392 aa17.42■□□□□ 0.38
APOC1-208ENST00000592535 KIF16BQ96L93 1317 aa17.42■□□□□ 0.38
APOC1-208ENST00000592535 PCNTO95613 3336 aa17.42■□□□□ 0.38
APOC1-208ENST00000592535 FOXN1O15353 648 aa17.41■□□□□ 0.38
APOC1-208ENST00000592535 UBTFL1P0CB47 393 aaPredicted RBP17.41■□□□□ 0.38
APOC1-208ENST00000592535 JAG2Q9Y219 1238 aa17.41■□□□□ 0.38
APOC1-208ENST00000592535 ECM29Q5VYK3 1845 aa17.4■□□□□ 0.38
APOC1-208ENST00000592535 WNT10BO00744 389 aa17.4■□□□□ 0.38
APOC1-208ENST00000592535 SASH1O94885 1247 aa17.4■□□□□ 0.38
APOC1-208ENST00000592535 GYG1P46976 350 aa17.4■□□□□ 0.38
APOC1-208ENST00000592535 RFX5P48382 616 aaPredicted RBP17.4■□□□□ 0.38
APOC1-208ENST00000592535 METTL24Q5JXM2 366 aa17.4■□□□□ 0.38
APOC1-208ENST00000592535 CDCA5Q96FF9 252 aa17.4■□□□□ 0.38
APOC1-208ENST00000592535 HHIPL1Q96JK4 782 aa17.4■□□□□ 0.38
APOC1-208ENST00000592535 GBA2Q9HCG7 927 aaPredicted RBP17.4■□□□□ 0.38
APOC1-208ENST00000592535 WBP1LQ9NX94 342 aa17.4■□□□□ 0.38
APOC1-208ENST00000592535 HDAC9Q9UKV0 1011 aa17.4■□□□□ 0.38
APOC1-208ENST00000592535 SCAF8Q9UPN6 1271 aaKnown RBP17.4■□□□□ 0.38
APOC1-208ENST00000592535 PITPNM2Q9BZ72 1349 aa17.4■□□□□ 0.38
APOC1-208ENST00000592535 ARAP2Q8WZ64 1704 aa17.39■□□□□ 0.37
APOC1-208ENST00000592535 AOC2O75106 756 aa17.39■□□□□ 0.37
APOC1-208ENST00000592535 HUNKP57058 714 aa17.39■□□□□ 0.37
APOC1-208ENST00000592535 VGLL2Q8N8G2 317 aa17.39■□□□□ 0.37
APOC1-208ENST00000592535 ARHGAP45Q92619 1136 aa17.39■□□□□ 0.37
APOC1-208ENST00000592535 FAM84BQ96KN1 310 aaPredicted RBP17.39■□□□□ 0.37
APOC1-208ENST00000592535 BCAR3O75815 825 aa17.38■□□□□ 0.37
APOC1-208ENST00000592535 HIBADHP31937 336 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms