RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 GRM1Q13255 1194 aa24.05■■□□□ 1.44
CCDC43-205ENST00000592333 RBM26Q5T8P6 1007 aaKnown RBP24.05■■□□□ 1.44
CCDC43-205ENST00000592333 GBA2Q9HCG7 927 aaPredicted RBP24.05■■□□□ 1.44
CCDC43-205ENST00000592333 PITPNM2Q9BZ72 1349 aa24.05■■□□□ 1.44
CCDC43-205ENST00000592333 EXOSC9Q06265 439 aaKnown RBP24.04■■□□□ 1.44
CCDC43-205ENST00000592333 CCDC102AQ96A19 550 aa24.04■■□□□ 1.44
CCDC43-205ENST00000592333 AOC2O75106 756 aa24.03■■□□□ 1.44
CCDC43-205ENST00000592333 ITGA6P23229 1130 aa24.03■■□□□ 1.44
CCDC43-205ENST00000592333 STRIP1Q5VSL9 837 aa24.03■■□□□ 1.44
CCDC43-205ENST00000592333 MPHOSPH8Q99549 860 aa24.03■■□□□ 1.44
CCDC43-205ENST00000592333 GGA3Q9NZ52 723 aa24.03■■□□□ 1.44
CCDC43-205ENST00000592333 RGMBQ6NW40 437 aa24.02■■□□□ 1.44
CCDC43-205ENST00000592333 MYOZ2Q9NPC6 264 aa24.02■■□□□ 1.44
CCDC43-205ENST00000592333 FKBP1BP68106 108 aa24.01■■□□□ 1.43
CCDC43-205ENST00000592333 SCARF1Q14162 830 aa24.01■■□□□ 1.43
CCDC43-205ENST00000592333 POLR2AP24928 1970 aaKnown RBP24.01■■□□□ 1.43
CCDC43-205ENST00000592333 OGFOD1Q8N543 542 aa24■■□□□ 1.43
CCDC43-205ENST00000592333 ZNF804BA4D1E1 1349 aa24■■□□□ 1.43
CCDC43-205ENST00000592333 ANKRD18BA2A2Z9 1011 aa23.99■■□□□ 1.43
CCDC43-205ENST00000592333 ADM5C9JUS6 153 aa23.99■■□□□ 1.43
CCDC43-205ENST00000592333 FAM161AQ3B820 660 aa23.99■■□□□ 1.43
CCDC43-205ENST00000592333 DACT2Q5SW24 774 aa23.99■■□□□ 1.43
CCDC43-205ENST00000592333 BEND3Q5T5X7 828 aa23.99■■□□□ 1.43
CCDC43-205ENST00000592333 ANGEL2Q5VTE6 544 aaKnown RBP23.98■■□□□ 1.43
CCDC43-205ENST00000592333 REM2Q8IYK8 340 aaPredicted RBP23.98■■□□□ 1.43
CCDC43-205ENST00000592333 SALL2Q9Y467 1007 aaPredicted RBP23.98■■□□□ 1.43
CCDC43-205ENST00000592333 FAM155AB1AL88 458 aaPredicted RBP23.97■■□□□ 1.43
CCDC43-205ENST00000592333 C15orf52Q6ZUT6 534 aaKnown RBP23.97■■□□□ 1.43
CCDC43-205ENST00000592333 CDCA5Q96FF9 252 aa23.97■■□□□ 1.43
CCDC43-205ENST00000592333 SPEF2Q9C093 1822 aa23.96■■□□□ 1.43
CCDC43-205ENST00000592333 WTIPA6NIX2 430 aaPredicted RBP23.96■■□□□ 1.43
CCDC43-205ENST00000592333 IFIT5Q13325 482 aaKnown RBP23.96■■□□□ 1.43
CCDC43-205ENST00000592333 ZNF157P51786 506 aaPredicted RBP23.95■■□□□ 1.42
CCDC43-205ENST00000592333 FOXO4P98177 505 aa23.95■■□□□ 1.42
CCDC43-205ENST00000592333 CHRNDQ07001 517 aa23.95■■□□□ 1.42
CCDC43-205ENST00000592333 TTLL5Q6EMB2 1281 aa23.95■■□□□ 1.42
CCDC43-205ENST00000592333 DLK2Q6UY11 383 aa23.95■■□□□ 1.42
CCDC43-205ENST00000592333 SPINK5Q9NQ38 1064 aaPredicted RBP23.95■■□□□ 1.42
CCDC43-205ENST00000592333 SAGE1Q9NXZ1 904 aa23.95■■□□□ 1.42
CCDC43-205ENST00000592333 ASTN2O75129 1339 aaPredicted RBP23.94■■□□□ 1.42
CCDC43-205ENST00000592333 ALDH1L1O75891 902 aa23.94■■□□□ 1.42
CCDC43-205ENST00000592333 KCNJ4P48050 445 aa23.94■■□□□ 1.42
CCDC43-205ENST00000592333 TXNRD3Q86VQ6 643 aa23.94■■□□□ 1.42
CCDC43-205ENST00000592333 FAM9BQ8IZU0 186 aa23.94■■□□□ 1.42
CCDC43-205ENST00000592333 ABHD8Q96I13 439 aa23.94■■□□□ 1.42
CCDC43-205ENST00000592333 GRM8O00222 908 aa23.93■■□□□ 1.42
CCDC43-205ENST00000592333 HDAC9Q9UKV0 1011 aa23.93■■□□□ 1.42
CCDC43-205ENST00000592333 ZNF646O15015 1829 aaPredicted RBP23.92■■□□□ 1.42
CCDC43-205ENST00000592333 F6X3S4 739 aa23.92■■□□□ 1.42
CCDC43-205ENST00000592333 SLC10A3P09131 477 aa23.92■■□□□ 1.42
CCDC43-205ENST00000592333 ZNF521Q96K83 1311 aa23.91■■□□□ 1.42
CCDC43-205ENST00000592333 WNT10BO00744 389 aa23.91■■□□□ 1.42
CCDC43-205ENST00000592333 CCDC57Q2TAC2 916 aa23.91■■□□□ 1.42
CCDC43-205ENST00000592333 CD209Q9NNX6 404 aa23.91■■□□□ 1.42
CCDC43-205ENST00000592333 PAPPA2Q9BXP8 1791 aa23.91■■□□□ 1.42
CCDC43-205ENST00000592333 NBPF9Q3BBW0 867 aa23.9■■□□□ 1.42
CCDC43-205ENST00000592333 IRS2Q9Y4H2 1338 aa23.89■■□□□ 1.42
CCDC43-205ENST00000592333 FKBP1AP62942 108 aaKnown RBP23.89■■□□□ 1.41
CCDC43-205ENST00000592333 KIF23Q02241 960 aaPredicted RBP23.89■■□□□ 1.41
CCDC43-205ENST00000592333 LMBR1LQ6UX01 489 aa23.89■■□□□ 1.41
CCDC43-205ENST00000592333 ZIC5Q96T25 663 aa23.89■■□□□ 1.41
CCDC43-205ENST00000592333 SRCIN1Q9C0H9 1055 aa23.89■■□□□ 1.41
CCDC43-205ENST00000592333 C9orf78Q9NZ63 289 aaPredicted RBP23.89■■□□□ 1.41
CCDC43-205ENST00000592333 IL1R1P14778 569 aa23.88■■□□□ 1.41
CCDC43-205ENST00000592333 NF2P35240 595 aa23.88■■□□□ 1.41
CCDC43-205ENST00000592333 ZNF804AQ7Z570 1209 aa23.88■■□□□ 1.41
CCDC43-205ENST00000592333 FBXW7Q969H0 707 aa23.88■■□□□ 1.41
CCDC43-205ENST00000592333 TSKSQ9UJT2 592 aa23.88■■□□□ 1.41
CCDC43-205ENST00000592333 KLRK1P26718 216 aa23.87■■□□□ 1.41
CCDC43-205ENST00000592333 GTF2IP78347 998 aa23.87■■□□□ 1.41
CCDC43-205ENST00000592333 LDHAL6AQ6ZMR3 332 aa23.87■■□□□ 1.41
CCDC43-205ENST00000592333 APOBEC3FQ8IUX4 373 aaKnown RBP23.87■■□□□ 1.41
CCDC43-205ENST00000592333 MTMR14Q8NCE2 650 aa23.87■■□□□ 1.41
CCDC43-205ENST00000592333 ZBED3Q96IU2 234 aaPredicted RBP23.87■■□□□ 1.41
CCDC43-205ENST00000592333 MXD3Q9BW11 206 aa23.87■■□□□ 1.41
CCDC43-205ENST00000592333 CHMP3Q9Y3E7 222 aa23.86■■□□□ 1.41
CCDC43-205ENST00000592333 UTYO14607 1347 aa23.85■■□□□ 1.41
CCDC43-205ENST00000592333 TAF7LQ5H9L4 462 aa23.85■■□□□ 1.41
CCDC43-205ENST00000592333 RASAL3Q86YV0 1011 aa23.85■■□□□ 1.41
CCDC43-205ENST00000592333 KIAA0825Q8IV33 1275 aa23.85■■□□□ 1.41
CCDC43-205ENST00000592333 CSRNP1Q96S65 589 aa23.85■■□□□ 1.41
CCDC43-205ENST00000592333 COL1A1P02452 1464 aaPredicted RBP23.85■■□□□ 1.41
CCDC43-205ENST00000592333 TAF5LO75529 589 aa23.84■■□□□ 1.41
CCDC43-205ENST00000592333 EPHA10Q5JZY3 1008 aa23.84■■□□□ 1.41
CCDC43-205ENST00000592333 CNNM1Q9NRU3 951 aa23.84■■□□□ 1.41
CCDC43-205ENST00000592333 RNF186Q9NXI6 227 aa23.84■■□□□ 1.41
CCDC43-205ENST00000592333 PTPRCP08575 1304 aa23.84■■□□□ 1.41
CCDC43-205ENST00000592333 UBE4AQ14139 1066 aa23.83■■□□□ 1.41
CCDC43-205ENST00000592333 SLC4A10Q6U841 1118 aa23.83■■□□□ 1.41
CCDC43-205ENST00000592333 A0A1B0GUL6 1792 aa23.83■■□□□ 1.4
CCDC43-205ENST00000592333 E9PSI1 815 aa23.82■■□□□ 1.4
CCDC43-205ENST00000592333 SASH1O94885 1247 aa23.82■■□□□ 1.4
CCDC43-205ENST00000592333 DLGAP5Q15398 846 aa23.82■■□□□ 1.4
CCDC43-205ENST00000592333 HELBQ8NG08 1087 aaPredicted RBP23.82■■□□□ 1.4
CCDC43-205ENST00000592333 PPP2R3BQ9Y5P8 575 aa23.82■■□□□ 1.4
CCDC43-205ENST00000592333 AKAP11Q9UKA4 1901 aa23.81■■□□□ 1.4
CCDC43-205ENST00000592333 UNCXA6NJT0 531 aa23.8■■□□□ 1.4
CCDC43-205ENST00000592333 RABL6Q3YEC7 729 aaPredicted RBP23.8■■□□□ 1.4
CCDC43-205ENST00000592333 ARMC9Q7Z3E5 817 aa23.8■■□□□ 1.4
CCDC43-205ENST00000592333 MCOLN1Q9GZU1 580 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms