RNA–Protein interactions for RNA: ENST00000592250.5

SDF2-210, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,025 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-210ENST00000592250 TRAPPC3LQ5T215 181 aa9.85□□□□□ -0.83
SDF2-210ENST00000592250 BLOC1S3Q6QNY0 202 aa9.85□□□□□ -0.83
SDF2-210ENST00000592250 XAGE3Q8WTP9 111 aa9.85□□□□□ -0.83
SDF2-210ENST00000592250 MAP3K2Q9Y2U5 619 aa9.85□□□□□ -0.83
SDF2-210ENST00000592250 COL15A1P39059 1388 aa9.85□□□□□ -0.83
SDF2-210ENST00000592250 COL24A1Q17RW2 1714 aa9.85□□□□□ -0.83
SDF2-210ENST00000592250 UTYO14607 1347 aa9.84□□□□□ -0.83
SDF2-210ENST00000592250 ALDH1L1O75891 902 aa9.84□□□□□ -0.83
SDF2-210ENST00000592250 MYL6BP14649 208 aa9.84□□□□□ -0.83
SDF2-210ENST00000592250 PIP4K2AP48426 406 aaPredicted RBP9.84□□□□□ -0.83
SDF2-210ENST00000592250 MDM2Q00987 491 aaPredicted RBP9.84□□□□□ -0.83
SDF2-210ENST00000592250 SLC4A10Q6U841 1118 aa9.84□□□□□ -0.83
SDF2-210ENST00000592250 SMC5Q8IY18 1101 aa9.84□□□□□ -0.83
SDF2-210ENST00000592250 RDH13Q8NBN7 331 aa9.84□□□□□ -0.83
SDF2-210ENST00000592250 SLC16A10Q8TF71 515 aa9.84□□□□□ -0.83
SDF2-210ENST00000592250 METTL22Q9BUU2 404 aaPredicted RBP9.84□□□□□ -0.83
SDF2-210ENST00000592250 USP42Q9H9J4 1324 aaKnown RBP9.83□□□□□ -0.84
SDF2-210ENST00000592250 ARFGEF2Q9Y6D5 1785 aa9.83□□□□□ -0.84
SDF2-210ENST00000592250 DDX58O95786 925 aaKnown RBP9.83□□□□□ -0.84
SDF2-210ENST00000592250 IGKV5-2P06315 115 aa9.83□□□□□ -0.84
SDF2-210ENST00000592250 YBX3P16989 372 aaKnown RBP eCLIP9.83□□□□□ -0.841e-6■□□□□ 8.7
SDF2-210ENST00000592250 MSL1Q68DK7 614 aa9.83□□□□□ -0.84
SDF2-210ENST00000592250 TTLL7Q6ZT98 887 aa9.83□□□□□ -0.84
SDF2-210ENST00000592250 ANKRD44Q8N8A2 993 aa9.83□□□□□ -0.84
SDF2-210ENST00000592250 LINS1Q8NG48 757 aa9.83□□□□□ -0.84
SDF2-210ENST00000592250 PLBD2Q8NHP8 589 aa9.83□□□□□ -0.84
SDF2-210ENST00000592250 NKX2-3Q8TAU0 364 aa9.83□□□□□ -0.84
SDF2-210ENST00000592250 SRCIN1Q9C0H9 1055 aa9.83□□□□□ -0.84
SDF2-210ENST00000592250 RWDD1Q9H446 243 aaPredicted RBP9.83□□□□□ -0.84
SDF2-210ENST00000592250 WWC3Q9ULE0 1092 aa9.83□□□□□ -0.84
SDF2-210ENST00000592250 ZPR1O75312 459 aa9.82□□□□□ -0.84
SDF2-210ENST00000592250 GNAI3P08754 354 aa9.82□□□□□ -0.84
SDF2-210ENST00000592250 GYS1P13807 737 aa9.82□□□□□ -0.84
SDF2-210ENST00000592250 RFC4P35249 363 aa9.82□□□□□ -0.84
SDF2-210ENST00000592250 CEP85Q6P2H3 762 aa9.82□□□□□ -0.84
SDF2-210ENST00000592250 SULF1Q8IWU6 871 aa9.82□□□□□ -0.84
SDF2-210ENST00000592250 RPAP2Q8IXW5 612 aaPredicted RBP9.82□□□□□ -0.84
SDF2-210ENST00000592250 C1orf115Q9H7X2 142 aa9.82□□□□□ -0.84
SDF2-210ENST00000592250 GPBP1L1Q9HC44 474 aaPredicted RBP9.82□□□□□ -0.84
SDF2-210ENST00000592250 NARFQ9UHQ1 456 aa9.82□□□□□ -0.84
SDF2-210ENST00000592250 SCN7AQ01118 1682 aa9.82□□□□□ -0.84
SDF2-210ENST00000592250 BCORQ6W2J9 1755 aa9.81□□□□□ -0.84
SDF2-210ENST00000592250 A0A087WZG4 1122 aa9.81□□□□□ -0.84
SDF2-210ENST00000592250 GRIN3BO60391 1043 aa9.81□□□□□ -0.84
SDF2-210ENST00000592250 AIMP1Q12904 312 aaKnown RBP9.81□□□□□ -0.84
SDF2-210ENST00000592250 SRP68Q9UHB9 627 aaKnown RBP9.81□□□□□ -0.84
SDF2-210ENST00000592250 NEURL1BA8MQ27 555 aa9.8□□□□□ -0.84
SDF2-210ENST00000592250 CAMTA2O94983 1202 aa9.8□□□□□ -0.84
SDF2-210ENST00000592250 GNAI2P04899 355 aa9.8□□□□□ -0.84
SDF2-210ENST00000592250 NBPF7P0C2Y1 421 aaPredicted RBP9.8□□□□□ -0.84
SDF2-210ENST00000592250 GCGRP47871 477 aa9.8□□□□□ -0.84
SDF2-210ENST00000592250 CASP7P55210 303 aa9.8□□□□□ -0.84
SDF2-210ENST00000592250 ATP8B2P98198 1209 aa9.8□□□□□ -0.84
SDF2-210ENST00000592250 CWF19L2Q2TBE0 894 aaKnown RBP9.8□□□□□ -0.84
SDF2-210ENST00000592250 PUS10Q3MIT2 529 aaKnown RBP9.8□□□□□ -0.84
SDF2-210ENST00000592250 USPL1Q5W0Q7 1092 aa9.8□□□□□ -0.84
SDF2-210ENST00000592250 RIC3Q7Z5B4 369 aa9.8□□□□□ -0.84
SDF2-210ENST00000592250 DZIP3Q86Y13 1208 aaKnown RBP9.8□□□□□ -0.84
SDF2-210ENST00000592250 KAZALD1Q96I82 304 aa9.8□□□□□ -0.84
SDF2-210ENST00000592250 DCTPP1Q9H773 170 aa9.8□□□□□ -0.84
SDF2-210ENST00000592250 TBC1D2BQ9UPU7 963 aa9.8□□□□□ -0.84
SDF2-210ENST00000592250 ZNF330Q9Y3S2 320 aaPredicted RBP9.8□□□□□ -0.84
SDF2-210ENST00000592250 ERVV-1B6SEH8 477 aa9.79□□□□□ -0.84
SDF2-210ENST00000592250 TRIM28Q13263 835 aaKnown RBP9.79□□□□□ -0.84
SDF2-210ENST00000592250 MTX1Q13505 466 aa9.79□□□□□ -0.84
SDF2-210ENST00000592250 GCKRQ14397 625 aa9.79□□□□□ -0.84
SDF2-210ENST00000592250 SKAP1Q86WV1 359 aa9.79□□□□□ -0.84
SDF2-210ENST00000592250 NLGN1Q8N2Q7 840 aa9.79□□□□□ -0.84
SDF2-210ENST00000592250 ISCA1Q9BUE6 129 aa9.79□□□□□ -0.84
SDF2-210ENST00000592250 PDZRN3Q9UPQ7 1066 aa9.79□□□□□ -0.84
SDF2-210ENST00000592250 MAP3K15Q6ZN16 1313 aa9.79□□□□□ -0.84
SDF2-210ENST00000592250 H7C1W4 665 aa9.78□□□□□ -0.84
SDF2-210ENST00000592250 GRM8O00222 908 aa9.78□□□□□ -0.84
SDF2-210ENST00000592250 UBTFL1P0CB47 393 aaPredicted RBP9.78□□□□□ -0.84
SDF2-210ENST00000592250 HSPA6P17066 643 aa9.78□□□□□ -0.84
SDF2-210ENST00000592250 TM4SF1P30408 202 aa9.78□□□□□ -0.84
SDF2-210ENST00000592250 TCIRG1Q13488 830 aa9.78□□□□□ -0.84
SDF2-210ENST00000592250 HLFQ16534 295 aa9.78□□□□□ -0.84
SDF2-210ENST00000592250 CLEC4GQ6UXB4 293 aa9.78□□□□□ -0.84
SDF2-210ENST00000592250 NPM2Q86SE8 214 aaKnown RBP9.78□□□□□ -0.84
SDF2-210ENST00000592250 SSH3Q8TE77 659 aa9.78□□□□□ -0.84
SDF2-210ENST00000592250 GCC1Q96CN9 775 aa9.78□□□□□ -0.84
SDF2-210ENST00000592250 MYD88Q99836 296 aa9.78□□□□□ -0.84
SDF2-210ENST00000592250 TMUB1Q9BVT8 246 aa9.78□□□□□ -0.84
SDF2-210ENST00000592250 REPIN1Q9BWE0 567 aaKnown RBP9.78□□□□□ -0.84
SDF2-210ENST00000592250 LRRFIP2Q9Y608 721 aaKnown RBP9.78□□□□□ -0.84
SDF2-210ENST00000592250 PNMA6EA0A0J9YXQ4 647 aa9.77□□□□□ -0.85
SDF2-210ENST00000592250 CD46P15529 392 aa9.77□□□□□ -0.85
SDF2-210ENST00000592250 NUCB1Q02818 461 aa9.77□□□□□ -0.85
SDF2-210ENST00000592250 FUT2Q10981 343 aa9.77□□□□□ -0.85
SDF2-210ENST00000592250 PPP1R18Q6NYC8 613 aa9.77□□□□□ -0.85
SDF2-210ENST00000592250 GIGYF2Q6Y7W6 1299 aaKnown RBP9.77□□□□□ -0.85
SDF2-210ENST00000592250 KIF6Q6ZMV9 814 aa9.77□□□□□ -0.85
SDF2-210ENST00000592250 GPCPD1Q9NPB8 672 aa9.77□□□□□ -0.85
SDF2-210ENST00000592250 NUP98P52948 1817 aa9.77□□□□□ -0.85
SDF2-210ENST00000592250 AFDNP55196 1824 aaKnown RBP9.77□□□□□ -0.85
SDF2-210ENST00000592250 CLCN1P35523 988 aa9.76□□□□□ -0.85
SDF2-210ENST00000592250 NEXNQ0ZGT2 675 aa9.76□□□□□ -0.85
SDF2-210ENST00000592250 NFIXQ14938 502 aa9.76□□□□□ -0.85
SDF2-210ENST00000592250 TBC1D9BQ66K14 1250 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms