RNA–Protein interactions for RNA: ENST00000592013.1

TNFRSF11A-204, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 2

Gene TNFRSF11A, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-204ENST00000592013 ZNF804BA4D1E1 1349 aa25.02■■□□□ 1.6
TNFRSF11A-204ENST00000592013 LBX1P52954 281 aa25.01■■□□□ 1.59
TNFRSF11A-204ENST00000592013 BRPF1P55201 1214 aaPredicted RBP25.01■■□□□ 1.59
TNFRSF11A-204ENST00000592013 HUNKP57058 714 aa25.01■■□□□ 1.59
TNFRSF11A-204ENST00000592013 FAM161AQ3B820 660 aa25.01■■□□□ 1.59
TNFRSF11A-204ENST00000592013 STRIP1Q5VSL9 837 aa25.01■■□□□ 1.59
TNFRSF11A-204ENST00000592013 GGA3Q9NZ52 723 aa25.01■■□□□ 1.59
TNFRSF11A-204ENST00000592013 PITPNM2Q9BZ72 1349 aa25.01■■□□□ 1.59
TNFRSF11A-204ENST00000592013 ALDH1L1O75891 902 aa25■■□□□ 1.59
TNFRSF11A-204ENST00000592013 CASP7P55210 303 aa25■■□□□ 1.59
TNFRSF11A-204ENST00000592013 CCDC102AQ96A19 550 aa25■■□□□ 1.59
TNFRSF11A-204ENST00000592013 GBA2Q9HCG7 927 aaPredicted RBP25■■□□□ 1.59
TNFRSF11A-204ENST00000592013 MYOZ2Q9NPC6 264 aa25■■□□□ 1.59
TNFRSF11A-204ENST00000592013 C9orf78Q9NZ63 289 aaPredicted RBP25■■□□□ 1.59
TNFRSF11A-204ENST00000592013 PSME4Q14997 1843 aa24.99■■□□□ 1.59
TNFRSF11A-204ENST00000592013 CCDC57Q2TAC2 916 aa24.99■■□□□ 1.59
TNFRSF11A-204ENST00000592013 BEND3Q5T5X7 828 aa24.99■■□□□ 1.59
TNFRSF11A-204ENST00000592013 HDAC9Q9UKV0 1011 aa24.99■■□□□ 1.59
TNFRSF11A-204ENST00000592013 GRM8O00222 908 aa24.98■■□□□ 1.59
TNFRSF11A-204ENST00000592013 HSPA8P11142 646 aaKnown RBP24.98■■□□□ 1.59
TNFRSF11A-204ENST00000592013 FKBP1BP68106 108 aa24.98■■□□□ 1.59
TNFRSF11A-204ENST00000592013 TAF7LQ5H9L4 462 aa24.98■■□□□ 1.59
TNFRSF11A-204ENST00000592013 CHMP3Q9Y3E7 222 aa24.98■■□□□ 1.59
TNFRSF11A-204ENST00000592013 SCARF1Q14162 830 aa24.97■■□□□ 1.59
TNFRSF11A-204ENST00000592013 FBXW7Q969H0 707 aa24.97■■□□□ 1.59
TNFRSF11A-204ENST00000592013 GMLQ99445 158 aa24.97■■□□□ 1.59
TNFRSF11A-204ENST00000592013 SRCIN1Q9C0H9 1055 aa24.97■■□□□ 1.59
TNFRSF11A-204ENST00000592013 SCN9AQ15858 1988 aa24.96■■□□□ 1.59
TNFRSF11A-204ENST00000592013 CAPN15O75808 1086 aa24.96■■□□□ 1.59
TNFRSF11A-204ENST00000592013 EGFRP00533 1210 aa24.96■■□□□ 1.59
TNFRSF11A-204ENST00000592013 RGMBQ6NW40 437 aa24.96■■□□□ 1.59
TNFRSF11A-204ENST00000592013 SPEF2Q9C093 1822 aa24.96■■□□□ 1.59
TNFRSF11A-204ENST00000592013 E9PSI1 815 aa24.95■■□□□ 1.58
TNFRSF11A-204ENST00000592013 F6X3S4 739 aa24.95■■□□□ 1.58
TNFRSF11A-204ENST00000592013 CHRNDQ07001 517 aa24.95■■□□□ 1.58
TNFRSF11A-204ENST00000592013 ANGEL2Q5VTE6 544 aaKnown RBP24.95■■□□□ 1.58
TNFRSF11A-204ENST00000592013 TTLL5Q6EMB2 1281 aa24.95■■□□□ 1.58
TNFRSF11A-204ENST00000592013 SLC4A10Q6U841 1118 aa24.95■■□□□ 1.58
TNFRSF11A-204ENST00000592013 REM2Q8IYK8 340 aaPredicted RBP24.95■■□□□ 1.58
TNFRSF11A-204ENST00000592013 ADM5C9JUS6 153 aa24.94■■□□□ 1.58
TNFRSF11A-204ENST00000592013 DACT2Q5SW24 774 aa24.94■■□□□ 1.58
TNFRSF11A-204ENST00000592013 ZNF804AQ7Z570 1209 aa24.94■■□□□ 1.58
TNFRSF11A-204ENST00000592013 AOC2O75106 756 aa24.93■■□□□ 1.58
TNFRSF11A-204ENST00000592013 NF2P35240 595 aa24.93■■□□□ 1.58
TNFRSF11A-204ENST00000592013 C15orf52Q6ZUT6 534 aaKnown RBP24.93■■□□□ 1.58
TNFRSF11A-204ENST00000592013 CDCA5Q96FF9 252 aa24.93■■□□□ 1.58
TNFRSF11A-204ENST00000592013 SPINK5Q9NQ38 1064 aaPredicted RBP24.93■■□□□ 1.58
TNFRSF11A-204ENST00000592013 ZNF157P51786 506 aaPredicted RBP24.92■■□□□ 1.58
TNFRSF11A-204ENST00000592013 FOXO4P98177 505 aa24.92■■□□□ 1.58
TNFRSF11A-204ENST00000592013 LMBR1LQ6UX01 489 aa24.92■■□□□ 1.58
TNFRSF11A-204ENST00000592013 LDHAL6AQ6ZMR3 332 aa24.92■■□□□ 1.58
TNFRSF11A-204ENST00000592013 PTPRCP08575 1304 aa24.91■■□□□ 1.58
TNFRSF11A-204ENST00000592013 CNNM1Q9NRU3 951 aa24.91■■□□□ 1.58
TNFRSF11A-204ENST00000592013 ZNF521Q96K83 1311 aa24.9■■□□□ 1.58
TNFRSF11A-204ENST00000592013 APOBEC3FQ8IUX4 373 aaKnown RBP24.89■■□□□ 1.58
TNFRSF11A-204ENST00000592013 CD209Q9NNX6 404 aa24.89■■□□□ 1.58
TNFRSF11A-204ENST00000592013 GTF2IP78347 998 aa24.88■■□□□ 1.57
TNFRSF11A-204ENST00000592013 TXNRD3Q86VQ6 643 aa24.87■■□□□ 1.57
TNFRSF11A-204ENST00000592013 SAGE1Q9NXZ1 904 aa24.87■■□□□ 1.57
TNFRSF11A-204ENST00000592013 MYO1BO43795 1136 aa24.86■■□□□ 1.57
TNFRSF11A-204ENST00000592013 FKBP1AP62942 108 aaKnown RBP24.86■■□□□ 1.57
TNFRSF11A-204ENST00000592013 POLR2AP24928 1970 aaKnown RBP24.85■■□□□ 1.57
TNFRSF11A-204ENST00000592013 WTIPA6NIX2 430 aaPredicted RBP24.85■■□□□ 1.57
TNFRSF11A-204ENST00000592013 WNT10BO00744 389 aa24.85■■□□□ 1.57
TNFRSF11A-204ENST00000592013 KIAA0825Q8IV33 1275 aa24.85■■□□□ 1.57
TNFRSF11A-204ENST00000592013 PAPPA2Q9BXP8 1791 aa24.85■■□□□ 1.57
TNFRSF11A-204ENST00000592013 TAF5LO75529 589 aa24.84■■□□□ 1.57
TNFRSF11A-204ENST00000592013 SLC10A3P09131 477 aa24.84■■□□□ 1.57
TNFRSF11A-204ENST00000592013 IL1R1P14778 569 aa24.84■■□□□ 1.57
TNFRSF11A-204ENST00000592013 DLGAP5Q15398 846 aa24.84■■□□□ 1.57
TNFRSF11A-204ENST00000592013 NBPF9Q3BBW0 867 aa24.84■■□□□ 1.57
TNFRSF11A-204ENST00000592013 UTYO14607 1347 aa24.84■■□□□ 1.57
TNFRSF11A-204ENST00000592013 ASTN2O75129 1339 aaPredicted RBP24.84■■□□□ 1.57
TNFRSF11A-204ENST00000592013 MROH5Q6ZUA9 1318 aa24.84■■□□□ 1.57
TNFRSF11A-204ENST00000592013 FAM155AB1AL88 458 aaPredicted RBP24.83■■□□□ 1.57
TNFRSF11A-204ENST00000592013 CT47B1P0C2W7 299 aaPredicted RBP24.83■■□□□ 1.57
TNFRSF11A-204ENST00000592013 UBE4AQ14139 1066 aa24.83■■□□□ 1.57
TNFRSF11A-204ENST00000592013 TTLL12Q14166 644 aaPredicted RBP24.83■■□□□ 1.57
TNFRSF11A-204ENST00000592013 ALDH1L2Q3SY69 923 aa24.83■■□□□ 1.57
TNFRSF11A-204ENST00000592013 COL1A1P02452 1464 aaPredicted RBP24.83■■□□□ 1.56
TNFRSF11A-204ENST00000592013 MRPL50Q8N5N7 158 aaKnown RBP24.82■■□□□ 1.56
TNFRSF11A-204ENST00000592013 HELBQ8NG08 1087 aaPredicted RBP24.82■■□□□ 1.56
TNFRSF11A-204ENST00000592013 HDAC5Q9UQL6 1122 aa24.82■■□□□ 1.56
TNFRSF11A-204ENST00000592013 PLIN1O60240 522 aa24.81■■□□□ 1.56
TNFRSF11A-204ENST00000592013 KLRK1P26718 216 aa24.81■■□□□ 1.56
TNFRSF11A-204ENST00000592013 KIF23Q02241 960 aaPredicted RBP24.81■■□□□ 1.56
TNFRSF11A-204ENST00000592013 DLK2Q6UY11 383 aa24.81■■□□□ 1.56
TNFRSF11A-204ENST00000592013 ARMC9Q7Z3E5 817 aa24.81■■□□□ 1.56
TNFRSF11A-204ENST00000592013 MXD3Q9BW11 206 aa24.81■■□□□ 1.56
TNFRSF11A-204ENST00000592013 PPP2R3BQ9Y5P8 575 aa24.81■■□□□ 1.56
TNFRSF11A-204ENST00000592013 SASH1O94885 1247 aa24.8■■□□□ 1.56
TNFRSF11A-204ENST00000592013 SLFN5Q08AF3 891 aa24.8■■□□□ 1.56
TNFRSF11A-204ENST00000592013 EPHA10Q5JZY3 1008 aa24.8■■□□□ 1.56
TNFRSF11A-204ENST00000592013 MTMR14Q8NCE2 650 aa24.8■■□□□ 1.56
TNFRSF11A-204ENST00000592013 VPS37DQ86XT2 251 aa24.79■■□□□ 1.56
TNFRSF11A-204ENST00000592013 ABHD8Q96I13 439 aa24.79■■□□□ 1.56
TNFRSF11A-204ENST00000592013 NBPF7P0C2Y1 421 aaPredicted RBP24.78■■□□□ 1.56
TNFRSF11A-204ENST00000592013 HIBADHP31937 336 aaKnown RBP24.78■■□□□ 1.56
TNFRSF11A-204ENST00000592013 SUCLG2Q96I99 432 aa24.78■■□□□ 1.56
TNFRSF11A-204ENST00000592013 ZNF594Q96JF6 807 aaPredicted RBP24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms